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PDB: 17801 results

7U6G
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Structure of PQS Response Protein PqsE(E182W,E280A) Variant
Descriptor: FE (III) ION, Quinolone signal response protein
Authors:Jeffrey, P.D, Taylor, I.R, Bassler, B.L.
Deposit date:2022-03-04
Release date:2022-08-31
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:The PqsE Active Site as a Target for Small Molecule Antimicrobial Agents against Pseudomonas aeruginosa.
Biochemistry, 61, 2022
1P33
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Pteridine reductase from Leishmania tarentolae complex with NADPH and MTX
Descriptor: METHOTREXATE, NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, Pteridine reductase 1
Authors:Zhao, H, Bray, T, Ouellette, M, Zhao, M, Ferre, R.A, Matthews, D, Whiteley, J.M, Varughese, K.I.
Deposit date:2003-04-16
Release date:2003-09-02
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (2.86 Å)
Cite:Structure of pteridine reductase (PTR1) from Leishmania tarentolae.
Acta Crystallogr.,Sect.D, 59, 2003
1HI1
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RNA dependent RNA polymerase from dsRNA bacteriophage phi6 plus bound NTP
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, P2 PROTEIN
Authors:Grimes, J.M, Butcher, S.J, Makeyev, E.V, Bamford, D.H, Stuart, D.I.
Deposit date:2001-01-01
Release date:2001-03-27
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (3 Å)
Cite:A Mechanism for Initiating RNA-Dependent RNA Polymerization
Nature, 410, 2001
4ODI
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2.6 Angstrom Crystal Structure of Putative Phosphoglycerate Mutase 1 from Toxoplasma gondii
Descriptor: Phosphoglycerate mutase PGMII, SODIUM ION
Authors:Minasov, G, Ruan, J, Ngo, H, Shuvalova, L, Dubrovska, I, Flores, K, Shanmugam, D, Roos, D, Anderson, W.F, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2014-01-10
Release date:2014-01-22
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:CSGID Solves Structures and Identifies Phenotypes for Five Enzymes in Toxoplasma gondii .
Front Cell Infect Microbiol, 8, 2018
8R8X
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Multicopy-refined carboxymyoglobin photolysis time series at 5 mJ/cm2 laser fluence, 327 fs time delay
Descriptor: CARBON MONOXIDE, Myoglobin, PROTOPORPHYRIN IX CONTAINING FE, ...
Authors:Barends, T, Schlichting, I.
Deposit date:2023-11-30
Release date:2024-03-06
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Influence of pump laser fluence on ultrafast myoglobin structural dynamics.
Nature, 626, 2024
1HUS
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RIBOSOMAL PROTEIN S7
Descriptor: RIBOSOMAL PROTEIN S7
Authors:Hosaka, H, Nakagawa, A, Tanaka, I.
Deposit date:1997-08-08
Release date:1998-01-28
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Ribosomal protein S7: a new RNA-binding motif with structural similarities to a DNA architectural factor.
Structure, 5, 1997
1NT0
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Crystal structure of the CUB1-EGF-CUB2 region of MASP2
Descriptor: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, ...
Authors:Feinberg, H, Uitdehaag, J.C.M, Davies, J.M, Wallis, R, Drickamer, K, Weis, W.I.
Deposit date:2003-01-28
Release date:2003-05-20
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Crystal structure of the CUB1-EGF-CUB2 region of mannose-binding protein associated serine protease-2
Embo J., 22, 2003
1HHV
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SOLUTION STRUCTURE OF VIRUS CHEMOKINE VMIP-II
Descriptor: VIRUS CHEMOKINE VMIP-II
Authors:Shao, W, Fernandez, E, Navenot, J.M, Wilken, J, Thompson, D.A, Pepiper, S, Schweitzer, B.I, Lolis, E.
Deposit date:1998-12-06
Release date:2003-09-16
Last modified:2023-12-27
Method:SOLUTION NMR
Cite:CCR2 and CCR5 receptor-binding properties of herpesvirus-8 vMIP-II based on sequence analysis and its solution structure
Eur.J.Biochem., 268, 2001
1HU3
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MIDDLE DOMAIN OF HUMAN EIF4GII
Descriptor: EIF4GII
Authors:Marcotrigiano, J, Lomakin, I, Pestova, T.V, Hellen, C.U.T, Sonenberg, N, Burley, S.K.
Deposit date:2001-01-03
Release date:2001-02-21
Last modified:2021-02-03
Method:X-RAY DIFFRACTION (2.37 Å)
Cite:A conserved HEAT domain within eIF4G directs assembly of the translation initiation machinery.
Mol.Cell, 7, 2001
2J28
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MODEL OF E. COLI SRP BOUND TO 70S RNCS
Descriptor: 23S RIBOSOMAL RNA, 4.5S SIGNAL RECOGNITION PARTICLE RNA, 50S ribosomal protein L11, ...
Authors:Halic, M, Blau, M, Becker, T, Mielke, T, Pool, M.R, Wild, K, Sinning, I, Beckmann, R.
Deposit date:2006-08-16
Release date:2006-11-08
Last modified:2024-05-08
Method:ELECTRON MICROSCOPY (9.5 Å)
Cite:Following the Signal Sequence from Ribosomal Tunnel Exit to Signal Recognition Particle
Nature, 444, 2006
2IEH
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BU of 2ieh by Molmil
Crystal structure of human kinesin Eg5 in complex with (R)-mon97, a new monastrol-based inhibitor that binds as (R)-enantiomer
Descriptor: ADENOSINE-5'-DIPHOSPHATE, CHLORIDE ION, Kinesin-like protein KIF11, ...
Authors:Garcia-Saez, I, Kozielski, F.
Deposit date:2006-09-19
Release date:2007-01-23
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structure of human Eg5 in complex with a new monastrol-based inhibitor bound in the R configuration.
J.Biol.Chem., 282, 2007
1OAH
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Cytochrome c Nitrite Reductase from Desulfovibrio desulfuricans ATCC 27774: The relevance of the two calcium sites in the structure of the catalytic subunit (NrfA).
Descriptor: CALCIUM ION, CHLORIDE ION, CYTOCHROME C NITRITE REDUCTASE, ...
Authors:Cunha, C.A, Macieira, S, Dias, J.M, Almeida, G, Goncalves, L.L, Costa, C, Lampreia, J, Huber, R, Moura, J.J.G, Moura, I, Romao, M.J.
Deposit date:2003-01-14
Release date:2003-05-08
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Cytochrome C Nitrite Reductase from Desulfovibrio Desulfuricans Atcc 27774. The Relevance of the Two Calcium Sites in the Structure of the Catalytic Subunit (Nrfa)
J.Biol.Chem., 278, 2003
2J91
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Crystal structure of Human Adenylosuccinate Lyase in complex with AMP
Descriptor: ADENOSINE MONOPHOSPHATE, ADENYLOSUCCINATE LYASE, CHLORIDE ION, ...
Authors:Stenmark, P, Moche, M, Arrowsmith, C, Berglund, H, Busam, R, Collins, R, Edwards, A, Ericsson, U.B, Flodin, S, Flores, A, Graslund, S, Hammarstrom, M, Hallberg, B.M, Holmberg Schiavone, L, Hogbom, M, Johansson, I, Karlberg, T, Kosinska, U, Kotenyova, T, Magnusdottir, A, Nilsson, M.E, Nilsson-Ehle, P, Nyman, T, Ogg, D, Persson, C, Sagemark, J, Sundstrom, M, Uppenberg, J, Uppsten, M, Thorsell, A.G, van Den Berg, S, Wallden, K, Weigelt, J, Nordlund, P.
Deposit date:2006-11-01
Release date:2006-11-07
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal Structure of Human Adenylosuccinate Lyase
To be Published
1OCB
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Structure of the wild-type cellobiohydrolase Cel6A from Humicolas insolens in complex with a fluorescent substrate
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 4-amino-4-deoxy-alpha-D-glucopyranose-(1-4)-beta-D-glucopyranose-(1-4)-beta-D-glucopyranose-(1-4)-methyl 4-thio-beta-D-glucopyranoside, CELLOBIOHYDROLASE II, ...
Authors:Varrot, A, Frandsen, T.P, Von Ossowski, I, Boyer, V, Driguez, H, Schulein, M, Davies, G.J.
Deposit date:2003-02-07
Release date:2003-07-10
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Structural Basis for Ligand Binding and Processivity in Cellobiohydrolase Cel6A from Humicola Insolens
Structure, 11, 2003
2CKM
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Torpedo californica acetylcholinesterase complexed with alkylene- linked bis-tacrine dimer (7 carbon linker)
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, ACETYLCHOLINESTERASE, N,N'-DI-1,2,3,4-TETRAHYDROACRIDIN-9-YLHEPTANE-1,7-DIAMINE
Authors:Brumshtein, B, Rydberg, E.H, Greenblatt, H.M, Wong, D.M, Shaya, D, Williams, L.D, Carlier, P.R, Pang, Y.P, Silman, I, Sussman, J.L.
Deposit date:2006-04-20
Release date:2006-09-04
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Complexes of alkylene-linked tacrine dimers with Torpedo californica acetylcholinesterase: Binding of Bis5-tacrine produces a dramatic rearrangement in the active-site gorge.
J. Med. Chem., 49, 2006
1LV0
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BU of 1lv0 by Molmil
Crystal structure of the Rab effector guanine nucleotide dissociation inhibitor (GDI) in complex with a geranylgeranyl (GG) peptide
Descriptor: GERAN-8-YL GERAN, RAB GDP disossociation inhibitor alpha, SULFATE ION
Authors:An, Y, Shao, Y, Alory, C, Matteson, J, Sakisaka, T, Chen, W, Gibbs, R.A, Wilson, I.A, Balch, W.E.
Deposit date:2002-05-23
Release date:2003-08-05
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2 Å)
Cite:Geranylgeranyl switching regulates GDI-Rab GTPase recycling.
Structure, 11, 2003
1M1P
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BU of 1m1p by Molmil
P21 crystal structure of the tetraheme cytochrome c3 from Shewanella oneidensis MR1
Descriptor: HEME C, SULFATE ION, Small tetraheme cytochrome c
Authors:Leys, D, Meyer, T.E, Tsapin, A.I, Nealson, K.H, Cusanovich, M.A, Van Beeumen, J.J.
Deposit date:2002-06-20
Release date:2002-08-14
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Crystal structures at atomic resolution reveal the novel concept of 'electron-harvesting' as a role for the small tetraheme cytochrome c
J.Biol.Chem., 277, 2002
1M7B
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BU of 1m7b by Molmil
Crystal structure of Rnd3/RhoE: functional implications
Descriptor: GUANOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, Rnd3/RhoE small GTP-binding protein
Authors:Fiegen, D, Blumenstein, L, Stege, P, Vetter, I.R, Ahmadian, M.R.
Deposit date:2002-07-19
Release date:2002-08-07
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of Rnd3/RhoE: functional implications
FEBS LETT., 525, 2002
4NYV
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BU of 4nyv by Molmil
Crystal Structure of the Bromodomain of human CREBBP in complex with a quinazolin-one ligand
Descriptor: 6-bromo-3-methyl-3,4-dihydroquinazolin-2(1H)-one, CREB-binding protein
Authors:Filippakopoulos, P, Picaud, S, Felletar, I, Fedorov, O, Martin, S, Monteiro, O.P, von Delft, F, Brennan, P, Arrowsmith, C.H, Edwards, A.M, Bountra, C, Knapp, S, Structural Genomics Consortium (SGC)
Deposit date:2013-12-11
Release date:2014-01-29
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.83 Å)
Cite:Crystal Structure of the Bromodomain of human CREBBP in complex with a quinazolin-one ligand
TO BE PUBLISHED
7TT7
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BU of 7tt7 by Molmil
BamABCDE bound to substrate EspP in the barrelized EspP/continuous open BamA state
Descriptor: Maltose/maltodextrin-binding periplasmic protein,Serine protease EspP chimera, Outer membrane protein assembly factor BamA, Outer membrane protein assembly factor BamC, ...
Authors:Doyle, M.T, Jimah, J.R, Dowdy, T, Ohlemacher, S.I, Larion, M, Hinshaw, J.E, Bernstein, H.D.
Deposit date:2022-01-31
Release date:2022-03-30
Last modified:2022-04-13
Method:ELECTRON MICROSCOPY (4.8 Å)
Cite:Cryo-EM structures reveal multiple stages of bacterial outer membrane protein folding.
Cell, 185, 2022
7TT6
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BamABCDE bound to substrate EspP in the intermediate-open EspP state
Descriptor: Maltose/maltodextrin-binding periplasmic protein,Serine protease EspP chimera, Outer membrane protein assembly factor BamA, Outer membrane protein assembly factor BamC, ...
Authors:Doyle, M.T, Jimah, J.R, Dowdy, T, Ohlemacher, S.I, Larion, M, Hinshaw, J.E, Bernstein, H.D.
Deposit date:2022-01-31
Release date:2022-03-30
Last modified:2022-04-13
Method:ELECTRON MICROSCOPY (4.3 Å)
Cite:Cryo-EM structures reveal multiple stages of bacterial outer membrane protein folding.
Cell, 185, 2022
1ML9
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BU of 1ml9 by Molmil
Structure of the Neurospora SET domain protein DIM-5, a histone lysine methyltransferase
Descriptor: Histone H3 methyltransferase DIM-5, UNKNOWN, ZINC ION
Authors:Zhang, X, Tamaru, H, Khan, S.I, Horton, J.R, Keefe, L.J, Selker, E.U, Cheng, X.
Deposit date:2002-08-30
Release date:2002-10-23
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.98 Å)
Cite:Structure of the Neurospora SET domain protein DIM-5, a histone H3 lysine methyltransferase
Cell(Cambridge,Mass.), 111, 2002
7TT3
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BamABCDE bound to substrate EspP class 5
Descriptor: Maltose/maltodextrin-binding periplasmic protein,Serine protease EspP chimera, Outer membrane protein assembly factor BamA, Outer membrane protein assembly factor BamB, ...
Authors:Doyle, M.T, Jimah, J.R, Dowdy, T, Ohlemacher, S.I, Larion, M, Hinshaw, J.E, Bernstein, H.D.
Deposit date:2022-01-31
Release date:2022-03-30
Last modified:2022-04-13
Method:ELECTRON MICROSCOPY (4.3 Å)
Cite:Cryo-EM structures reveal multiple stages of bacterial outer membrane protein folding.
Cell, 185, 2022
6DPY
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BU of 6dpy by Molmil
X-ray crystal structure of AmpC beta-lactamase with inhibitor
Descriptor: 4-{[(4R)-6-fluoro-3,4-dihydro-2H-1-benzopyran-4-yl]sulfamoyl}-2,5-dimethylfuran-3-carboxylic acid, Beta-lactamase
Authors:Singh, I.
Deposit date:2018-06-09
Release date:2018-07-04
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.91 Å)
Cite:Ultra-large library docking for discovering new chemotypes.
Nature, 566, 2019
7TT4
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BamABCDE bound to substrate EspP class 6
Descriptor: Maltose/maltodextrin-binding periplasmic protein,Serine protease EspP chimera, Outer membrane protein assembly factor BamA, Outer membrane protein assembly factor BamB, ...
Authors:Doyle, M.T, Jimah, J.R, Dowdy, T, Ohlemacher, S.I, Larion, M, Hinshaw, J.E, Bernstein, H.D.
Deposit date:2022-01-31
Release date:2022-03-30
Last modified:2022-04-13
Method:ELECTRON MICROSCOPY (4.2 Å)
Cite:Cryo-EM structures reveal multiple stages of bacterial outer membrane protein folding.
Cell, 185, 2022

223532

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