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PDB: 17801 results

2I83
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hyaluronan-binding domain of CD44 in its ligand-bound form
Descriptor: CD44 antigen
Authors:Takeda, M, Ogino, S, Umemoto, R, Sakakura, M, Kajiwara, M, Sugahara, K.N, Hayasaka, H, Miyasaka, M, Terasawa, H, Shimada, I.
Deposit date:2006-09-01
Release date:2006-11-21
Last modified:2022-03-09
Method:SOLUTION NMR
Cite:Ligand-induced Structural Changes of the CD44 Hyaluronan-binding Domain Revealed by NMR
J.Biol.Chem., 281, 2006
4S3K
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BU of 4s3k by Molmil
Crystal structure of the Bacillus megaterium QM B1551 spore cortex-lytic enzyme SleL
Descriptor: SULFATE ION, Spore germination protein YaaH
Authors:Christie, G, Chirgadze, D.Y, Ustok, F.I.
Deposit date:2015-02-04
Release date:2015-08-19
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structural and functional analysis of SleL, a peptidoglycan lysin involved in germination of Bacillus spores.
Proteins, 83, 2015
7MJB
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BU of 7mjb by Molmil
Crystal Structure of Nanoluc Luciferase Mutant R164Q
Descriptor: CHLORIDE ION, DECANOIC ACID, DI(HYDROXYETHYL)ETHER, ...
Authors:Shabalin, I.G, Reza, M.S, Ai, H, Minor, W.
Deposit date:2021-04-19
Release date:2021-05-05
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystal Structure of Nanoluc Luciferase Mutant R164Q
To Be Published
2IB6
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BU of 2ib6 by Molmil
Structural characterization of a blue chromoprotein and its yellow mutant from the sea anemone cnidopus japonicus
Descriptor: PHOSPHATE ION, Yellow mutant chromo protein
Authors:Chan, M.C.Y, Bosanac, I, Ho, D, Prive, G, Ikura, M.
Deposit date:2006-09-10
Release date:2006-10-10
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural Characterization of a Blue Chromoprotein and Its Yellow Mutant from the Sea Anemone Cnidopus Japonicus
J.Biol.Chem., 281, 2006
3DGI
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BU of 3dgi by Molmil
Crystal structure of F87A/T268A mutant of CYP BM3
Descriptor: Bifunctional P-450/NADPH-P450 reductase, DIMETHYL SULFOXIDE, PROTOPORPHYRIN IX CONTAINING FE
Authors:Le Trong, I, Katayama, J.H, Totah, R.A, Stenkamp, R.E, Fox, E.P.
Deposit date:2008-06-13
Release date:2009-06-16
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Homolytic versus heterolytic dioxygen bond cleavage in cytochrome P450 BM3.
To be Published
4RLN
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BU of 4rln by Molmil
Hen egg-white lysozyme solved from serial crystallography at a synchrotron source, data processed with nXDS
Descriptor: Lysozyme C
Authors:Botha, S, Nass, K, Barends, T, Kabsch, W, Latz, B, Dworkowski, F, Foucar, L, Panepucci, E, Wang, M, Shoeman, R, Schlichting, I, Doak, R.B.
Deposit date:2014-10-17
Release date:2015-02-25
Last modified:2017-11-22
Method:X-RAY DIFFRACTION (2.17 Å)
Cite:Room-temperature serial crystallography at synchrotron X-ray sources using slowly flowing free-standing high-viscosity microstreams.
Acta Crystallogr.,Sect.D, 71, 2015
2XR5
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BU of 2xr5 by Molmil
Crystal structure of the complex of the carbohydrate recognition domain of human DC-SIGN with pseudo dimannoside mimic.
Descriptor: CALCIUM ION, CD209 ANTIGEN, CHLORIDE ION, ...
Authors:Thepaut, M, Suitkeviciute, I, Sattin, S, Reina, J, Bernardi, A, Fieschi, F.
Deposit date:2010-09-10
Release date:2011-10-19
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.42 Å)
Cite:Structure of a Glycomimetic Ligand in the Carbohydrate Recognition Domain of C-Type Lectin Dc-Sign. Structural Requirements for Selectivity and Ligand Design.
J.Am.Chem.Soc., 135, 2013
5ZWY
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BU of 5zwy by Molmil
Ribokinase from Leishmania donovani
Descriptor: CHLORIDE ION, GLYCEROL, Ribokinase, ...
Authors:Gatreddi, S, Vasudevan, D, Qureshi, I.A.
Deposit date:2018-05-17
Release date:2019-05-22
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Unraveling structural insights of ribokinase from Leishmania donovani.
Int.J.Biol.Macromol., 136, 2019
6A8C
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Ribokinase from Leishmania donovani with ADP
Descriptor: ADENOSINE-5'-DIPHOSPHATE, CHLORIDE ION, GLYCEROL, ...
Authors:Gatreddi, S, Vasudevan, D, Qureshi, I.A.
Deposit date:2018-07-06
Release date:2019-07-10
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.98 Å)
Cite:Unraveling structural insights of ribokinase from Leishmania donovani.
Int.J.Biol.Macromol., 136, 2019
1W3A
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BU of 1w3a by Molmil
Three dimensional structure of a novel pore-forming lectin from the mushroom Laetiporus sulphureus
Descriptor: GLYCEROL, HEMOLYTIC LECTIN LSLA, beta-D-galactopyranose-(1-4)-alpha-D-glucopyranose
Authors:Mancheno, J.M, Tateno, H, Goldstein, I.J, Martinez-Ripoll, M, Hermoso, J.A.
Deposit date:2004-07-14
Release date:2005-02-01
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:Structural Analysis of the Laetiporus Sulphureus Hemolytic Pore-Forming Lectin in Complex with Sugars
J.Biol.Chem., 280, 2005
3D9W
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BU of 3d9w by Molmil
Crystal Structure Analysis of Nocardia farcinica Arylamine N-acetyltransferase
Descriptor: Putative acetyltransferase
Authors:Li de la Sierra-Gallay, I, Pluvinage, B, Rodrigues-Lima, F, Martins, M, Dupret, J.M.
Deposit date:2008-05-28
Release date:2008-09-02
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Functional and structural characterization of the arylamine N-acetyltransferase from the opportunistic pathogen Nocardia farcinica
J.Mol.Biol., 383, 2008
3Q4U
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BU of 3q4u by Molmil
Crystal structure of the ACVR1 kinase domain in complex with LDN-193189
Descriptor: 1,2-ETHANEDIOL, 4-[6-(4-piperazin-1-ylphenyl)pyrazolo[1,5-a]pyrimidin-3-yl]quinoline, Activin receptor type-1, ...
Authors:Chaikuad, A, Sanvitale, C, Cooper, C.D.O, Mahajan, P, Daga, N, Petrie, K, Alfano, I, Gileadi, O, Fedorov, O, Allerston, C.K, Krojer, T, Vollmar, M, von Delft, F, Weigelt, J, Arrowsmith, C.H, Edwards, A.M, Bountra, C, Bullock, A, Structural Genomics Consortium (SGC)
Deposit date:2010-12-24
Release date:2011-02-09
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.82 Å)
Cite:A new class of small molecule inhibitor of BMP signaling.
Plos One, 8, 2013
4RMI
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BU of 4rmi by Molmil
Human Sirt2 in complex with SirReal1 and Ac-Lys-OTC peptide
Descriptor: Ac-Lys-OTC peptide, N-(5-benzyl-1,3-thiazol-2-yl)-2-[(4,6-dimethylpyrimidin-2-yl)sulfanyl]acetamide, NAD-dependent protein deacetylase sirtuin-2, ...
Authors:Rumpf, T, Schiedel, M, Karaman, B, Roessler, C, North, B.J, Lehotzky, A, Olah, J, Ladwein, K.I, Schmidtkunz, K, Gajer, M, Pannek, M, Steegborn, C, Sinclair, D.A, Gerhardt, S, Ovadi, J, Schutkowski, M, Sippl, W, Einsle, O, Jung, M.
Deposit date:2014-10-21
Release date:2015-02-25
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Selective Sirt2 inhibition by ligand-induced rearrangement of the active site.
Nat Commun, 6, 2015
4RNI
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BU of 4rni by Molmil
PaMorA dimeric phosphodiesterase. apo form
Descriptor: Motility regulator
Authors:Phippen, C.W, Tews, I.
Deposit date:2014-10-24
Release date:2014-11-19
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.17 Å)
Cite:Formation and dimerization of the phosphodiesterase active site of the Pseudomonas aeruginosa MorA, a bi-functional c-di-GMP regulator.
Febs Lett., 588, 2014
3HQ2
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BU of 3hq2 by Molmil
BsuCP Crystal Structure
Descriptor: Bacillus subtilis M32 carboxypeptidase, CHLORIDE ION, FLUORIDE ION, ...
Authors:Lee, M.M, Isaza, C.E, White, J.D, Chen, R.P.-Y, Liang, G.F.-C, He, H.T.-F, Chan, S.I, Chan, M.K.
Deposit date:2009-06-05
Release date:2009-06-30
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Insight into the substrate length restriction of M32 carboxypeptidases: Characterization of two distinct subfamilies.
Proteins, 77, 2009
1VS1
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BU of 1vs1 by Molmil
Crystal structure of 3-deoxy-D-arabino-heptulosonate-7-phosphate synthase (DAHP synthase) from Aeropyrum pernix in complex with Mn2+ and PEP
Descriptor: 3-deoxy-7-phosphoheptulonate synthase, MANGANESE (II) ION, PHOSPHOENOLPYRUVATE
Authors:Shumilin, I.A, Zhou, L, Wu, J, Woodard, R.W, Bauerle, R, Kretsinger, R.H.
Deposit date:2006-03-09
Release date:2006-05-16
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal structure of 3-deoxy-D-arabino-heptulosonate-7-phosphate synthase (DAHP synthase) from Aeropyrum pernix in complex with Mn2+ and PEP
TO BE PUBLISHED
6A6G
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BU of 6a6g by Molmil
Crystal structure of thermostable FiSufS-SufU complex from thermophilic Fervidobacterium Islandicum AW-1
Descriptor: Cysteine desulfurase, DI(HYDROXYETHYL)ETHER, GLYCEROL, ...
Authors:Dhanasingh, I, Jin, H.S, Lee, D.W, Lee, S.H.
Deposit date:2018-06-27
Release date:2019-10-09
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.49 Å)
Cite:The sulfur formation system mediating extracellular cysteine-cystine recycling in Fervidobacterium islandicum AW-1 is associated with keratin degradation.
Microb Biotechnol, 2020
4TN3
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BU of 4tn3 by Molmil
Structure of the BBox-Coiled-coil region of Rhesus Trim5alpha
Descriptor: TRIM5/cyclophilin A fusion protein/T4 Lysozyme chimera, ZINC ION
Authors:Kirkpatrick, J.J, Stoye, J.P, Taylor, I.A, Goldstone, D.C.
Deposit date:2014-06-03
Release date:2014-07-16
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (3.1989 Å)
Cite:Structural studies of postentry restriction factors reveal antiparallel dimers that enable avid binding to the HIV-1 capsid lattice.
Proc.Natl.Acad.Sci.USA, 111, 2014
1VGG
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BU of 1vgg by Molmil
Crystal Structure of the Conserved Hypothetical Protein TTHA1091 from Thermus Thermophilus HB8
Descriptor: Conserved Hypothetical Protein TT1634 (TTHA1091)
Authors:Satoh, S, Yao, M, Kousumi, Y, Ebihara, A, Matsumoto, K, Okamoto, A, Tanaka, I, Yokoyama, S, Kuramitsu, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2004-04-26
Release date:2004-10-26
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Crystal Structure of the Conserved Hypothetical Protein TT1634 from Thermus Thermophilus HB8
To be Published
1W19
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BU of 1w19 by Molmil
Lumazine Synthase from Mycobacterium tuberculosis bound to 3-(1,3,7- trihydro-9-D-ribityl-2,6,8-purinetrione-7-yl)propane 1-phosphate
Descriptor: (2R,3S)-1,4-DIMERCAPTOBUTANE-2,3-DIOL, (2S,3S)-1,4-DIMERCAPTOBUTANE-2,3-DIOL, (4S,5S)-1,2-DITHIANE-4,5-DIOL, ...
Authors:Morgunova, E, Meining, W, Illarionov, B, Haase, I, Fischer, M, Cushman, M, Bacher, A, Ladenstein, R.
Deposit date:2004-06-03
Release date:2005-03-02
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal Structure of Lumazine Synthase from Mycobacterium Tuberculosis as a Target for Rational Drug Design: Binding Mode of a New Class of Purinetrione Inhibitors(,)
Biochemistry, 44, 2005
6A8A
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BU of 6a8a by Molmil
Ribokinase from Leishmania donovani with ATP
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, CHLORIDE ION, GLYCEROL, ...
Authors:Gatreddi, S, Qureshi, I.A.
Deposit date:2018-07-06
Release date:2019-07-10
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Unraveling structural insights of ribokinase from Leishmania donovani.
Int.J.Biol.Macromol., 136, 2019
1W1Y
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BU of 1w1y by Molmil
Crystal structure of S. marcescens chitinase B in complex with the cyclic dipeptide inhibitor cyclo-(L-Tyr-L-Pro) at 1.85 A resolution
Descriptor: CHITINASE B, CYCLO-(L-TYROSINE-L-PROLINE) INHIBITOR, GLYCEROL, ...
Authors:Houston, D.R, Synstad, B, Eijsink, V.G.H, Eggleston, I, Van Aalten, D.M.F.
Deposit date:2004-06-24
Release date:2005-01-10
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Structure-Based Exploration of Cyclic Dipeptide Chitinase Inhibitors
J.Med.Chem., 47, 2004
1W1T
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Crystal structure of S. marcescens chitinase B in complex with the cyclic dipeptide inhibitor cyclo-(His-L-Pro) at 1.9 A resolution
Descriptor: CHITINASE B, CYCLO-(L-HISTIDINE-L-PROLINE) INHIBITOR, GLYCEROL, ...
Authors:Houston, D.R, Synstad, B, Eijsink, V.G.H, Eggleston, I, van Aalten, D.M.F.
Deposit date:2004-06-24
Release date:2005-01-10
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structure-Based Exploration of Cyclic Dipeptide Chitinase Inhibitors
J.Med.Chem., 47, 2004
2MPV
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BU of 2mpv by Molmil
Structural insight into host recognition and biofilm formation by aggregative adherence fimbriae of enteroaggregative Esherichia coli
Descriptor: Major fimbrial subunit of aggregative adherence fimbria II AafA
Authors:Matthews, S.J, Yang, Y, Berry, A.A, Pakharukova, N, Garnett, J.A, Lee, W, Cota, E, Liu, B, Roy, S, Tuittila, M, Marchant, J, Inman, K.G, Ruiz-Perez, F, Mandomando, I, Nataro, J.P, Zavialov, A.V.
Deposit date:2014-06-04
Release date:2014-10-29
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Structural insight into host recognition by aggregative adherence fimbriae of enteroaggregative Escherichia coli.
Plos Pathog., 10, 2014
1ROS
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BU of 1ros by Molmil
Crystal structure of MMP-12 complexed to 2-(1,3-dioxo-1,3-dihydro-2H-isoindol-2-yl)ethyl-4-(4-ethoxy[1,1-biphenyl]-4-yl)-4-oxobutanoic acid
Descriptor: 2-[2-(1,3-DIOXO-1,3-DIHYDRO-2H-ISOINDOL-2-YL)ETHYL]-4-(4'-ETHOXY-1,1'-BIPHENYL-4-YL)-4-OXOBUTANOIC ACID, CALCIUM ION, Macrophage metalloelastase, ...
Authors:Morales, R, Perrier, S, Florent, J.M, Beltra, J, Dufour, S, De Mendez, I, Manceau, P, Tertre, A, Moreau, F, Compere, D, Dublanchet, A.C, O'Gara, M.
Deposit date:2003-12-02
Release date:2004-12-07
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structures of novel non-peptidic, non-zinc chelating inhibitors bound to MMP-12.
J.Mol.Biol., 341, 2004

223532

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