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PDB: 432 件

2NRE
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BU of 2nre by Molmil
Crystal structure of pseudoudirinde synthase TruA in complex with leucyl tRNA
分子名称: POTASSIUM ION, leucyl tRNA, tRNA pseudouridine synthase A
著者Hur, S, Stroud, R.M.
登録日2006-11-01
公開日2007-05-15
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (4 Å)
主引用文献How U38, 39, and 40 of Many tRNAs Become the Targets for Pseudouridylation by TruA.
Mol.Cell, 26, 2007
2NR0
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BU of 2nr0 by Molmil
Crystal structure of pseudoudirinde synthase TruA in complex with leucyl tRNA
分子名称: leucyl tRNA, tRNA pseudouridine synthase A
著者Hur, S, Stroud, R.M.
登録日2006-11-01
公開日2007-05-15
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (3.9 Å)
主引用文献How U38, 39, and 40 of Many tRNAs Become the Targets for Pseudouridylation by TruA.
Mol.Cell, 26, 2007
2NQP
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BU of 2nqp by Molmil
Crystal structure of pseudoudirinde synthase TruA in complex with leucyl tRNA
分子名称: POTASSIUM ION, tRNA pseudouridine synthase A, transfer RNA
著者Hur, S, Stroud, R.M.
登録日2006-10-31
公開日2007-05-15
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (3.5 Å)
主引用文献How U38, 39, and 40 of Many tRNAs Become the Targets for Pseudouridylation by TruA.
Mol.Cell, 26, 2007
2GIO
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BU of 2gio by Molmil
Solution Structure of a portion of the 5'UTR of HspA mRNA of Bradyrhizobium japonicum
分子名称: 29-MER
著者Chowdhury, S, Maris, C, Allain, F.H, Narberhaus, F.
登録日2006-03-29
公開日2006-06-20
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Molecular basis for temperature sensing by an RNA thermometer.
Embo J., 25, 2006
2GIP
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BU of 2gip by Molmil
Solution structure of a portion of the 5'UTR of HspA mRNA from Bradyrhizobium janponicum having deleted G83
分子名称: 28-MER
著者Chowdhury, S, Maris, C, Allain, F.H, Narberhaus, F.
登録日2006-03-29
公開日2006-06-20
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Molecular basis for temperature sensing by an RNA thermometer.
Embo J., 25, 2006
8H17
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BU of 8h17 by Molmil
Crystal structure of the Globin domain of Thermosynechococcus elongatus BP-1
分子名称: IMIDAZOLE, PROTOPORPHYRIN IX CONTAINING FE, Tlr1989 protein
著者Mathur, S, Yadav, S.K, Pal, K.R, Kundu, S.
登録日2022-09-30
公開日2023-04-26
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献A novel single sensor hemoglobin domain from the thermophilic cyanobacteria Thermosynechococcus elongatus BP-1 exhibits higher pH but lower thermal stability compared to globins from mesophilic organisms.
Int.J.Biol.Macromol., 240, 2023
1A80
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BU of 1a80 by Molmil
Native 2,5-DIKETO-D-GLUCONIC acid reductase a from CORYNBACTERIUM SP. complexed with nadph
分子名称: 2,5-DIKETO-D-GLUCONIC ACID REDUCTASE A, NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
著者Khurana, S, Powers, D.B, Anderson, S, Blaber, M.
登録日1998-03-31
公開日1999-03-30
最終更新日2023-08-02
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Crystal structure of 2,5-diketo-D-gluconic acid reductase A complexed with NADPH at 2.1-A resolution.
Proc.Natl.Acad.Sci.USA, 95, 1998
6X9I
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BU of 6x9i by Molmil
Human DNMT1(729-1600) Bound to Zebularine-Containing 12mer dsDNA
分子名称: 1,2-ETHANEDIOL, DNA (5'-D(*GP*AP*GP*GP*CP*(5CM)P*GP*CP*CP*TP*GP*C)-3'), DNA (5'-D(*GP*CP*AP*GP*G)-R(P*(PYO))-D(P*GP*GP*CP*CP*TP*C)-3'), ...
著者Pathuri, S, Horton, J.R, Cheng, X.
登録日2020-06-02
公開日2021-07-07
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Discovery of a first-in-class reversible DNMT1-selective inhibitor with improved tolerability and efficacy in acute myeloid leukemia.
Nat Cancer, 2, 2021
6X9K
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Human DNMT1(729-1600) Bound to Zebularine-Containing 12mer dsDNA and Inhibitor GSK3685032A
分子名称: (2R)-2-{[6-(4-aminopiperidin-1-yl)-3,5-dicyano-4-ethylpyridin-2-yl]sulfanyl}-2-phenylacetamide, 1,2-ETHANEDIOL, DNA (5'-D(*GP*AP*GP*GP*CP*(5CM)P*GP*CP*CP*TP*GP*C)-3'), ...
著者Pathuri, S, Horton, J.R, Cheng, X.
登録日2020-06-02
公開日2021-07-07
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.65 Å)
主引用文献Discovery of a first-in-class reversible DNMT1-selective inhibitor with improved tolerability and efficacy in acute myeloid leukemia.
Nat Cancer, 2, 2021
6X9J
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BU of 6x9j by Molmil
Human DNMT1(729-1600) Bound to Zebularine-Containing 12mer dsDNA and Inhibitor GSK3830052
分子名称: 1,2-ETHANEDIOL, DNA (5'-D(*GP*AP*GP*GP*CP*(5CM)P*GP*CP*CP*TP*GP*C)-3'), DNA (5'-D(*GP*CP*AP*GP*G)-R(P*(PYO))-D(P*GP*GP*CP*CP*TP*C)-3'), ...
著者Pathuri, S, Horton, J.R, Cheng, X.
登録日2020-06-02
公開日2021-07-07
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.79 Å)
主引用文献Discovery of a first-in-class reversible DNMT1-selective inhibitor with improved tolerability and efficacy in acute myeloid leukemia.
Nat Cancer, 2, 2021
6NE0
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BU of 6ne0 by Molmil
Structure of double-stranded target DNA engaged Csy complex from Pseudomonas aeruginosa (PA-14)
分子名称: CRISPR RNA (60-MER), CRISPR target DNA (44-MER), CRISPR-associated endonuclease Cas6/Csy4, ...
著者Chowdhury, S, Rollins, M.F, Carter, J, Golden, S.M, Miettinen, H.M, Santiago-Frangos, A, Faith, D, Lawrence, M.C, Wiedenheft, B, Lander, G.C.
登録日2018-12-15
公開日2018-12-26
最終更新日2024-03-13
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献Structure Reveals a Mechanism of CRISPR-RNA-Guided Nuclease Recruitment and Anti-CRISPR Viral Mimicry.
Mol. Cell, 74, 2019
5UZ9
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BU of 5uz9 by Molmil
Cryo EM structure of anti-CRISPRs, AcrF1 and AcrF2, bound to type I-F crRNA-guided CRISPR surveillance complex
分子名称: Anti-CRISPR protein 30, Anti-CRISPR protein Acr30-35, CRISPR RNA (60-MER), ...
著者Chowdhury, S, Carter, J, Rollins, M.F, Jackson, R.N, Hoffmann, C, Nosaka, L, Bondy-Denomy, J, Maxwell, K.L, Davidson, A.R, Fischer, E.R, Lander, G.C, Wiedenheft, B.
登録日2017-02-25
公開日2017-04-26
最終更新日2024-03-13
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献Structure Reveals Mechanisms of Viral Suppressors that Intercept a CRISPR RNA-Guided Surveillance Complex.
Cell, 169, 2017
3FXE
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BU of 3fxe by Molmil
Crystal structure of interacting domains of IcmR and IcmQ (seleno-derivative)
分子名称: Protein IcmQ, Protein IcmR
著者Raychaudhury, S, Akey, C.W, Head, J.F.
登録日2009-01-20
公開日2009-04-28
最終更新日2021-10-20
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structure and Function of Interacting IcmR-IcmQ Domains from a Type IVb Secretion System in Legionella pneumophila.
Structure, 17, 2009
3FXD
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BU of 3fxd by Molmil
Crystal structure of interacting domains of IcmR and IcmQ
分子名称: Protein IcmQ, Protein IcmR
著者Raychaudhury, S, Akey, C.W, Head, J.F.
登録日2009-01-20
公開日2009-04-28
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Structure and Function of Interacting IcmR-IcmQ Domains from a Type IVb Secretion System in Legionella pneumophila.
Structure, 17, 2009
1MHW
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BU of 1mhw by Molmil
Design of non-covalent inhibitors of human cathepsin L. From the 96-residue proregion to optimized tripeptides
分子名称: 4-biphenylacetyl-Cys-(D)Arg-Tyr-N-(2-phenylethyl) amide, Cathepsin L
著者Chowdhury, S, Sivaraman, J, Wang, J, Devanathan, G, Lachance, P, Qi, H, Menard, R, Lefebvre, J, Konishi, Y, Cygler, M, Sulea, T, Purisima, E.O.
登録日2002-08-21
公開日2002-12-11
最終更新日2017-10-11
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Design of non-covalent inhibitors of human cathepsin L. From the 96-residue proregion to optimized tripeptides
J.Med.Chem., 45, 2002
4P4H
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BU of 4p4h by Molmil
Caught-in-action signaling complex of RIG-I 2CARD domain and MAVS CARD domain
分子名称: Mitochondrial antiviral-signaling protein, Probable ATP-dependent RNA helicase DDX58, Ubiquitin-60S ribosomal protein L40
著者Wu, B, Hur, S.
登録日2014-03-12
公開日2014-07-30
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (3.4 Å)
主引用文献Molecular Imprinting as a Signal-Activation Mechanism of the Viral RNA Sensor RIG-I.
Mol.Cell, 55, 2014
8SRO
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BU of 8sro by Molmil
FoxP3 tetramer on TTTG repeats
分子名称: DNA 72-mer, Forkhead box protein P3
著者Leng, F, Hur, S.
登録日2023-05-05
公開日2023-10-18
最終更新日2023-12-27
実験手法ELECTRON MICROSCOPY (3.3 Å)
主引用文献FOXP3 recognizes microsatellites and bridges DNA through multimerization.
Nature, 624, 2023
8SRP
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BU of 8srp by Molmil
FoxP3 forms Ladder-like multimer to bridge TTTG repeats
分子名称: DNA 72-mer, Forkhead box protein P3
著者Leng, F, Hur, S.
登録日2023-05-05
公開日2023-10-18
最終更新日2023-12-27
実験手法ELECTRON MICROSCOPY (3.7 Å)
主引用文献FOXP3 recognizes microsatellites and bridges DNA through multimerization.
Nature, 624, 2023
7TDW
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BU of 7tdw by Molmil
Structure of FOXP3-DNA complex
分子名称: DNA (5'-D(*AP*AP*AP*TP*TP*TP*GP*TP*TP*TP*AP*CP*TP*C)-3'), DNA (5'-D(P*GP*AP*GP*TP*AP*AP*AP*CP*AP*AP*AP*TP*TP*T)-3'), Forkhead box P3
著者Leng, F, Hur, S.
登録日2022-01-03
公開日2022-08-10
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (4 Å)
主引用文献The transcription factor FoxP3 can fold into two dimerization states with divergent implications for regulatory T cell function and immune homeostasis.
Immunity, 55, 2022
7TDX
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BU of 7tdx by Molmil
Structure of FOXP3-DNA complex
分子名称: DNA (5'-D(*AP*AP*AP*TP*TP*TP*GP*TP*TP*TP*AP*CP*TP*C)-3'), DNA (5'-D(P*GP*AP*GP*TP*AP*AP*AP*CP*AP*AP*AP*TP*TP*T)-3'), Forkhead box P3
著者Leng, F, Hur, S.
登録日2022-01-03
公開日2022-08-10
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (3.1 Å)
主引用文献The transcription factor FoxP3 can fold into two dimerization states with divergent implications for regulatory T cell function and immune homeostasis.
Immunity, 55, 2022
3J6J
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BU of 3j6j by Molmil
3.6 Angstrom resolution MAVS filament generated from helical reconstruction
分子名称: Mitochondrial antiviral-signaling protein
著者Wu, B, Peisley, A, Li, Z, Egelman, E, Walz, T, Penczek, P, Hur, S.
登録日2014-03-13
公開日2014-07-30
最終更新日2024-02-21
実験手法ELECTRON MICROSCOPY (3.64 Å)
主引用文献Molecular Imprinting as a Signal-Activation Mechanism of the Viral RNA Sensor RIG-I.
Mol.Cell, 55, 2014
4NQK
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BU of 4nqk by Molmil
Structure of an Ubiquitin complex
分子名称: Probable ATP-dependent RNA helicase DDX58, Ubiquitin
著者Peisley, A, Wu, B, Hur, S.
登録日2013-11-25
公開日2014-03-05
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (3.7 Å)
主引用文献Structural basis for ubiquitin-mediated antiviral signal activation by RIG-I.
Nature, 509, 2014
4GL2
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BU of 4gl2 by Molmil
Structural Basis for dsRNA duplex backbone recognition by MDA5
分子名称: Interferon-induced helicase C domain-containing protein 1, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, RNA (5'-R(*AP*UP*CP*CP*GP*CP*GP*GP*CP*CP*CP*U)-3'), ...
著者Wu, B, Hur, S.
登録日2012-08-13
公開日2013-01-09
最終更新日2013-02-06
実験手法X-RAY DIFFRACTION (3.557 Å)
主引用文献Structural Basis for dsRNA Recognition, Filament Formation, and Antiviral Signal Activation by MDA5.
Cell(Cambridge,Mass.), 152, 2013
7JL3
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BU of 7jl3 by Molmil
Cryo-EM structure of RIG-I:dsRNA filament in complex with RIPLET PrySpry domain (trimer)
分子名称: ADENOSINE-5'-DIPHOSPHATE, Antiviral innate immune response receptor RIG-I, E3 ubiquitin-protein ligase RNF135, ...
著者Kato, K, Ahmad, S, Hur, S.
登録日2020-07-29
公開日2020-12-09
最終更新日2024-03-06
実験手法ELECTRON MICROSCOPY (4.2 Å)
主引用文献Structural analysis of RIG-I-like receptors reveals ancient rules of engagement between diverse RNA helicases and TRIM ubiquitin ligases.
Mol.Cell, 81, 2021
7JL0
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BU of 7jl0 by Molmil
Cryo-EM structure of MDA5-dsRNA in complex with TRIM65 PSpry domain (Monomer)
分子名称: ADENOSINE-5'-DIPHOSPHATE, Interferon-induced helicase C domain-containing protein 1, MAGNESIUM ION, ...
著者Kato, K, Ahmad, S, Hur, S.
登録日2020-07-29
公開日2020-12-09
最終更新日2024-03-06
実験手法ELECTRON MICROSCOPY (4.3 Å)
主引用文献Structural analysis of RIG-I-like receptors reveals ancient rules of engagement between diverse RNA helicases and TRIM ubiquitin ligases.
Mol.Cell, 81, 2021

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