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PDB: 58 results

9CMR
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BU of 9cmr by Molmil
Saccharomyces cerevisiae Tom1 HECT domain
Descriptor: E3 ubiquitin-protein ligase TOM1, SULFATE ION
Authors:Schubert, H.L, Hill, C.P.
Deposit date:2024-07-15
Release date:2025-05-28
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:Tom1p ubiquitin ligase structure, interaction with Spt6p, and function in maintaining normal transcript levels and the stability of chromatin in promoters.
To Be Published
9CTM
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BU of 9ctm by Molmil
Condensing region of EcPKS2 - acetylated dataset
Descriptor: Polyketide synthase 2
Authors:Schubert, H.L, Hill, C.P.
Deposit date:2024-07-25
Release date:2025-01-29
Last modified:2025-02-19
Method:ELECTRON MICROSCOPY (2.92 Å)
Cite:The structure of full-length AFPK supports the ACP linker in a role that regulates iterative polyketide and fatty acid assembly.
Proc.Natl.Acad.Sci.USA, 122, 2025
9CTN
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BU of 9ctn by Molmil
Modifying region of EcPKS2 - acetylated dataset
Descriptor: NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, Polyketide synthase 2, ~{S}-[2-[3-[[(2~{R})-3,3-dimethyl-2-oxidanyl-4-phosphonooxy-butanoyl]amino]propanoylamino]ethyl] ethanethioate
Authors:Schubert, H.L, Hill, C.P, Li, F, Schmidt, E.W.
Deposit date:2024-07-25
Release date:2025-01-29
Last modified:2025-02-19
Method:ELECTRON MICROSCOPY (3.11 Å)
Cite:The structure of full-length AFPK supports the ACP linker in a role that regulates iterative polyketide and fatty acid assembly.
Proc.Natl.Acad.Sci.USA, 122, 2025
9CTI
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BU of 9cti by Molmil
Condensing region of EcPKS2 - malonylCoA inhibited dataset
Descriptor: EcPKS2 - condensing domain bound to malonyl-CoA and malonyl, MALONYL-COENZYME A
Authors:Schubert, H.L, Hill, C.P.
Deposit date:2024-07-25
Release date:2025-01-29
Last modified:2025-02-19
Method:ELECTRON MICROSCOPY (3.03 Å)
Cite:The structure of full-length AFPK supports the ACP linker in a role that regulates iterative polyketide and fatty acid assembly.
Proc.Natl.Acad.Sci.USA, 122, 2025
9CTK
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BU of 9ctk by Molmil
Modifying region of EcPKS2 - malonylCoA inhibited dataset
Descriptor: NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, Polyketide synthase 2
Authors:Schubert, H.L, Hill, C.P.
Deposit date:2024-07-25
Release date:2025-01-29
Last modified:2025-02-19
Method:ELECTRON MICROSCOPY (2.92 Å)
Cite:The structure of full-length AFPK supports the ACP linker in a role that regulates iterative polyketide and fatty acid assembly.
Proc.Natl.Acad.Sci.USA, 122, 2025
9CTL
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BU of 9ctl by Molmil
Full length EcPKS2 - malonylCoA inhibited dataset
Descriptor: MALONYL-COENZYME A, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, Polyketide synthase 2
Authors:Schubert, H.L, Hill, C.P.
Deposit date:2024-07-25
Release date:2025-01-29
Last modified:2025-02-19
Method:ELECTRON MICROSCOPY (3.15 Å)
Cite:The structure of full-length AFPK supports the ACP linker in a role that regulates iterative polyketide and fatty acid assembly.
Proc.Natl.Acad.Sci.USA, 122, 2025
9CQ1
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BU of 9cq1 by Molmil
Condensing region of EcPKS1
Descriptor: EcPKS1 - condensing region
Authors:Schubert, H.L, Hill, C.P.
Deposit date:2024-07-19
Release date:2025-01-29
Last modified:2025-02-19
Method:ELECTRON MICROSCOPY (4.3 Å)
Cite:The structure of full-length AFPK supports the ACP linker in a role that regulates iterative polyketide and fatty acid assembly.
Proc.Natl.Acad.Sci.USA, 122, 2025
9CTO
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BU of 9cto by Molmil
Full length EcPKS2 - acylated dataset with three ACP positions
Descriptor: NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, Polyketide synthase 2, ~{S}-[2-[3-[[(2~{R})-3,3-dimethyl-2-oxidanyl-4-phosphonooxy-butanoyl]amino]propanoylamino]ethyl] ethanethioate
Authors:Schubert, H.L, Hill, C.P.
Deposit date:2024-07-25
Release date:2025-01-29
Last modified:2025-02-19
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:The structure of full-length AFPK supports the ACP linker in a role that regulates iterative polyketide and fatty acid assembly.
Proc.Natl.Acad.Sci.USA, 122, 2025
9CQ9
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BU of 9cq9 by Molmil
Modifying region of EcPKS1
Descriptor: Polyketide synthase 1
Authors:Schubert, H.L, Hill, C.P.
Deposit date:2024-07-19
Release date:2025-01-29
Last modified:2025-02-19
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:The structure of full-length AFPK supports the ACP linker in a role that regulates iterative polyketide and fatty acid assembly.
Proc.Natl.Acad.Sci.USA, 122, 2025
1CBF
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BU of 1cbf by Molmil
THE X-RAY STRUCTURE OF A COBALAMIN BIOSYNTHETIC ENZYME, COBALT PRECORRIN-4 METHYLTRANSFERASE, CBIF
Descriptor: COBALT-PRECORRIN-4 TRANSMETHYLASE, PHOSPHATE ION, S-ADENOSYL-L-HOMOCYSTEINE
Authors:Schubert, H.L, Raux, E, Woodcock, S.C, Wilson, K.S, Warren, M.J.
Deposit date:1998-05-01
Release date:1999-05-11
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:The X-ray structure of a cobalamin biosynthetic enzyme, cobalt-precorrin-4 methyltransferase.
Nat.Struct.Biol., 5, 1998
1YTS
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BU of 1yts by Molmil
A LIGAND-INDUCED CONFORMATIONAL CHANGE IN THE YERSINIA PROTEIN TYROSINE PHOSPHATASE
Descriptor: SULFATE ION, YERSINIA PROTEIN TYROSINE PHOSPHATASE
Authors:Schubert, H.L, Stuckey, J.A, Fauman, E.B, Dixon, J.E, Saper, M.A.
Deposit date:1995-04-07
Release date:1995-07-10
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:A ligand-induced conformational change in the Yersinia protein tyrosine phosphatase.
Protein Sci., 4, 1995
2CBF
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BU of 2cbf by Molmil
THE X-RAY STRUCTURE OF A COBALAMIN BIOSYNTHETIC ENZYME, COBALT PRECORRIN-4 METHYLTRANSFERASE, CBIF, FROM BACILLUS MEGATERIUM, WITH THE HIS-TAG CLEAVED OFF
Descriptor: COBALT-PRECORRIN-4 TRANSMETHYLASE, S-ADENOSYL-L-HOMOCYSTEINE
Authors:Schubert, H.L, Raux, E, Woodcock, S.C, Warren, M.J, Wilson, K.S.
Deposit date:1998-05-01
Release date:1999-05-11
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:The X-ray structure of a cobalamin biosynthetic enzyme, cobalt-precorrin-4 methyltransferase.
Nat.Struct.Biol., 5, 1998
3NWH
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BU of 3nwh by Molmil
Crystal structure of BST2/Tetherin
Descriptor: Bone marrow stromal antigen 2
Authors:Schubert, H.L, Zhai, Q, Hill, C.P.
Deposit date:2010-07-09
Release date:2010-07-21
Last modified:2024-11-27
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structural and functional studies on the extracellular domain of BST2/tetherin in reduced and oxidized conformations.
Proc.Natl.Acad.Sci.USA, 107, 2010
1QGO
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BU of 1qgo by Molmil
ANAEROBIC COBALT CHELATASE IN COBALAMIN BIOSYNTHESIS FROM SALMONELLA TYPHIMURIUM
Descriptor: ANAEROBIC COBALAMIN BIOSYNTHETIC COBALT CHELATASE, SULFATE ION
Authors:Schubert, H.L, Raux, E, Warren, M.J, Wilson, K.S.
Deposit date:1999-05-03
Release date:1999-09-29
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Common chelatase design in the branched tetrapyrrole pathways of heme and anaerobic cobalamin synthesis.
Biochemistry, 38, 1999
1A6E
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BU of 1a6e by Molmil
THERMOSOME-MG-ADP-ALF3 COMPLEX
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ALUMINUM FLUORIDE, MAGNESIUM ION, ...
Authors:Ditzel, L, Loewe, J, Stock, D, Stetter, K.-O, Huber, H, Huber, R, Steinbacher, S.
Deposit date:1998-02-24
Release date:1999-03-23
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Crystal structure of the thermosome, the archaeal chaperonin and homolog of CCT.
Cell(Cambridge,Mass.), 93, 1998
1A6D
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BU of 1a6d by Molmil
THERMOSOME FROM T. ACIDOPHILUM
Descriptor: THERMOSOME (ALPHA SUBUNIT), THERMOSOME (BETA SUBUNIT)
Authors:Ditzel, L, Loewe, J, Stock, D, Stetter, K.-O, Huber, H, Huber, R, Steinbacher, S.
Deposit date:1998-02-24
Release date:1999-03-23
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Crystal structure of the thermosome, the archaeal chaperonin and homolog of CCT.
Cell(Cambridge,Mass.), 93, 1998
3MMC
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BU of 3mmc by Molmil
Structure of the dissimilatory sulfite reductase from Archaeoglobus fulgidus
Descriptor: GLYCEROL, IRON/SULFUR CLUSTER, SIROHEME, ...
Authors:Schiffer, A, Parey, K, Warkentin, E, Diederichs, K, Huber, H, Stetter, K.O, Kroneck, P.M.H, Ermler, U.
Deposit date:2010-04-19
Release date:2010-05-12
Last modified:2024-11-27
Method:X-RAY DIFFRACTION (2.04 Å)
Cite:Structure of the dissimilatory sulfite reductase from the hyperthermophilic archaeon Archaeoglobus fulgidus.
J.Mol.Biol., 379, 2008
1JNZ
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BU of 1jnz by Molmil
Structure of adenylylsulfate reductase from the hyperthermophilic Archaeoglobus fulgidus at 1.6 resolution
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, IRON/SULFUR CLUSTER, SULFITE ION, ...
Authors:Fritz, G, Roth, A, Schiffer, A, Buechert, T, Bourenkov, G, Bartunik, H.D, Huber, H, Stetter, K.O, Kroneck, P.M, Ermler, U.
Deposit date:2001-07-26
Release date:2002-03-27
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structure of adenylylsulfate reductase from the hyperthermophilic Archaeoglobus fulgidus at 1.6-A resolution
Proc.Natl.Acad.Sci.USA, 99, 2002
1JNR
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BU of 1jnr by Molmil
Structure of adenylylsulfate reductase from the hyperthermophilic Archaeoglobus fulgidus at 1.6 resolution
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, GLYCEROL, IRON/SULFUR CLUSTER, ...
Authors:Fritz, G, Roth, A, Schiffer, A, Buechert, T, Bourenkov, G, Bartunik, H.D, Huber, H, Stetter, K.O, Kroneck, P.M.H, Ermler, U.
Deposit date:2001-07-25
Release date:2002-02-27
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structure of adenylylsulfate reductase from the hyperthermophilic Archaeoglobus fulgidus at 1.6-A resolution
Proc.Natl.Acad.Sci.USA, 99, 2002
1MZC
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BU of 1mzc by Molmil
Co-Crystal Structure Of Human Farnesyltransferase With Farnesyldiphosphate and Inhibitor Compound 33a
Descriptor: 2-[3-(3-ETHYL-1-METHYL-2-OXO-AZEPAN-3-YL)-PHENOXY]-4-[1-AMINO-1-(1-METHYL-1H-IMIDIZOL-5-YL)-ETHYL]-BENZONITRILE, FARNESYL DIPHOSPHATE, Protein Farnesyltransferase alpha Subunit, ...
Authors:deSolms, S.J, Ciccarone, T.M, MacTough, S.C, Shaw, A.W, Buser, C.A, Ellis-Hutchings, M, Fernandes, C, Hamilton, K.A, Huber, H.E, Kohl, N.E, Lobell, R.B, Robinson, R.G, Tsou, N.N, Walsh, E.S, Graham, S.L, Beese, L.S, Taylor, J.S.
Deposit date:2002-10-07
Release date:2003-07-08
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2 Å)
Cite:Dual Protein Farnesyltransferase-Geranylgeranyltransferase-I Inhibitors as Potential Cancer Chemotherapeutic Agents.
J.Med.Chem., 46, 2003
1Q0B
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BU of 1q0b by Molmil
Crystal structure of the motor protein KSP in complex with ADP and monastrol
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ETHYL 4-(3-HYDROXYPHENYL)-6-METHYL-2-THIOXO-1,2,3,4-TETRAHYDROPYRIMIDINE-5-CARBOXYLATE, Kinesin-like protein KIF11, ...
Authors:Yan, Y, Sardana, V, Xu, B, Halczenko, W, Homnick, C, Buser, C.A, Hartman, G.D, Huber, H.E, Kuo, L.C.
Deposit date:2003-07-15
Release date:2004-01-13
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Inhibition of a mitotic motor protein: where, how, and conformational consequences
J.Mol.Biol., 335, 2004
8U7T
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BU of 8u7t by Molmil
Substrate-bound Cdc48, Class 1
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Cell division control protein 48, MAGNESIUM ION, ...
Authors:Cooney, I, Schubert, H.L, Cedeno, K, Lin, H.J.L, Fisher, O.N, Price, J.C, Hill, C.P, Shen, P.S.
Deposit date:2023-09-15
Release date:2024-11-06
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Visualization of the Cdc48 AAA+ ATPase protein unfolding pathway.
Nat Commun, 15, 2024
6PEK
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BU of 6pek by Molmil
Structure of Spastin Hexamer (Subunit A-E) in complex with substrate peptide
Descriptor: ADENOSINE-5'-DIPHOSPHATE, BERYLLIUM TRIFLUORIDE ION, MAGNESIUM ION, ...
Authors:Han, H, Schubert, H.L, McCullough, J, Monroe, N, Sundquist, W.I, Hill, C.P.
Deposit date:2019-06-20
Release date:2019-12-04
Last modified:2025-05-14
Method:ELECTRON MICROSCOPY (4.2 Å)
Cite:Structure of spastin bound to a glutamate-rich peptide implies a hand-over-hand mechanism of substrate translocation.
J.Biol.Chem., 295, 2020
6PEN
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BU of 6pen by Molmil
Structure of Spastin Hexamer (whole model) in complex with substrate peptide
Descriptor: ADENOSINE-5'-DIPHOSPHATE, BERYLLIUM TRIFLUORIDE ION, EYEYEYEYEY, ...
Authors:Han, H, Schubert, H.L, McCullough, J, Monroe, N, Sundquist, W.I, Hill, C.P.
Deposit date:2019-06-20
Release date:2019-12-04
Last modified:2024-03-13
Method:ELECTRON MICROSCOPY (4.2 Å)
Cite:Structure of spastin bound to a glutamate-rich peptide implies a hand-over-hand mechanism of substrate translocation.
J.Biol.Chem., 295, 2020
8U8I
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BU of 8u8i by Molmil
Cdc48-Shp1 unfolding native substrate, Class 4
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Cell division control protein 48, MAGNESIUM ION, ...
Authors:Cooney, I, Schubert, H.L, Cedeno, K, Carson, R, Fisher, O.N, Price, J.C, Hill, C.P, Shen, P.S.
Deposit date:2023-09-18
Release date:2024-11-06
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Visualization of the Cdc48 AAA+ ATPase protein unfolding pathway.
Nat Commun, 15, 2024

 

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