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PDB: 548 results

8HHT
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Crystal structure of the SARS-CoV-2 main protease in complex with Hit-1
Descriptor: 3C-like proteinase nsp5, DIMETHYL SULFOXIDE, ~{N}-[(2~{R},3~{S})-3-oxidanyl-4-oxidanylidene-1-phenyl-4-(1,3-thiazol-2-ylmethylamino)butan-2-yl]benzamide
Authors:Zeng, R, Xie, L.W, Huang, C, Wang, K, Liu, Y.Z, Yang, S.Y, Lei, J.
Deposit date:2022-11-17
Release date:2023-03-29
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:A new generation M pro inhibitor with potent activity against SARS-CoV-2 Omicron variants.
Signal Transduct Target Ther, 8, 2023
5YUO
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Crystal structure of SSB protein from Pseudomonas aeruginosa PAO1
Descriptor: GLYCEROL, Single-stranded DNA-binding protein
Authors:Huang, Y.H, Huang, C.Y.
Deposit date:2017-11-22
Release date:2018-10-31
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.037 Å)
Cite:The glycine-rich flexible region in SSB is crucial for PriA stimulation.
RSC Adv., 8, 2018
4UA2
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BU of 4ua2 by Molmil
Crystal structure of dual function transcriptional regulator MerR from Bacillus megaterium MB1
Descriptor: Regulatory protein
Authors:Lin, L.Y, Chang, C.C, Zou, X.W, Huang, C.C, Chan, N.L.
Deposit date:2014-08-07
Release date:2015-07-22
Last modified:2020-01-29
Method:X-RAY DIFFRACTION (2.61 Å)
Cite:Structural basis of the mercury(II)-mediated conformational switching of the dual-function transcriptional regulator MerR
Nucleic Acids Res., 43, 2015
5YYU
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Crystal structure of Staphylococcus aureus single-stranded DNA-binding protein SsbB
Descriptor: Single-stranded DNA-binding protein
Authors:Huang, Y.H, Huang, C.Y.
Deposit date:2017-12-11
Release date:2018-08-15
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.984 Å)
Cite:Characterization of single-stranded DNA-binding protein SsbB from Staphylococcus aureus: SsbB cannot stimulate PriA helicase.
Rsc Adv, 8, 2018
6KLK
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BU of 6klk by Molmil
Crystal structure of the Pseudomonas aeruginosa dihydropyrimidinase complexed with 5-FU
Descriptor: 5-FLUOROURACIL, D-hydantoinase/dihydropyrimidinase, ZINC ION
Authors:Huang, Y.H, Chen, I.C, Huang, C.Y.
Deposit date:2019-07-30
Release date:2019-11-06
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.759 Å)
Cite:Crystal structure of dihydropyrimidinase in complex with anticancer drug 5-fluorouracil.
Biochem.Biophys.Res.Commun., 519, 2019
5V54
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Crystal structure of 5-HT1B receptor in complex with methiothepin
Descriptor: 1-methyl-4-[(5~{S})-3-methylsulfanyl-5,6-dihydrobenzo[b][1]benzothiepin-5-yl]piperazine, 5-hydroxytryptamine receptor 1B,OB-1 fused 5-HT1b receptor,5-hydroxytryptamine receptor 1B
Authors:Yin, W.C, Zhou, X.E, Yang, D, de Waal, P, Wang, M.T, Dai, A, Cai, X, Huang, C.Y, Liu, P, Yin, Y, Liu, B, Caffrey, M, Melcher, K, Xu, Y, Wang, M.W, Xu, H.E, Jiang, Y.
Deposit date:2017-03-13
Release date:2018-02-07
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (3.9 Å)
Cite:A common antagonistic mechanism for class A GPCRs revealed by the structure of the human 5-HT1B serotonin receptor bound to an antagonist
Cell Discov, 2018
3AMS
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BU of 3ams by Molmil
Crystal Structures of Bacillus subtilis Alkaline Phytase in Complex with Ca2+, Cd2+, Co2+, Ni2+, Mg2+ and myo-Inositol Hexasulfate
Descriptor: 3-phytase, CADMIUM ION, CALCIUM ION, ...
Authors:Zeng, Y.F, Ko, T.P, Lai, H.L, Cheng, Y.S, Wu, T.H, Ma, Y, Yang, C.S, Cheng, K.J, Huang, C.H, Guo, R.T, Liu, J.R.
Deposit date:2010-08-22
Release date:2011-04-13
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.08 Å)
Cite:Crystal structures of Bacillus alkaline phytase in complex with divalent metal ions and inositol hexasulfate
J.Mol.Biol., 409, 2011
3AMC
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BU of 3amc by Molmil
Crystal structures of Thermotoga maritima Cel5A, apo form and dimer/au
Descriptor: Endoglucanase
Authors:Wu, T.H, Huang, C.H, Ko, T.P, Lai, H.L, Ma, Y, Cheng, Y.S, Liu, J.R, Guo, R.T.
Deposit date:2010-08-19
Release date:2011-08-10
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Diverse substrate recognition mechanism revealed by Thermotoga maritima Cel5A structures in complex with cellotetraose, cellobiose and mannotriose
Biochim.Biophys.Acta, 1814, 2011
3AZT
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Diverse Substrates Recognition Mechanism Revealed by Thermotoga maritima Cel5A Structures in Complex with Cellotetraose
Descriptor: Endoglucanase, beta-D-glucopyranose-(1-4)-beta-D-glucopyranose-(1-4)-beta-D-glucopyranose-(1-4)-alpha-D-glucopyranose
Authors:Wu, T.H, Huang, C.H, Ko, T.P, Lai, H.L, Ma, Y, Chen, C.C, Cheng, Y.S, Liu, J.R, Guo, R.T.
Deposit date:2011-05-30
Release date:2011-08-10
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Diverse substrate recognition mechanism revealed by Thermotoga maritima Cel5A structures in complex with cellotetraose, cellobiose and mannotriose
Biochim.Biophys.Acta, 1814, 2011
8HHU
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BU of 8hhu by Molmil
Crystal structure of the SARS-CoV-2 main protease in complex with SY110
Descriptor: (1~{R})-3,3-bis(fluoranyl)-~{N}-[(2~{R})-3-methoxy-1-oxidanylidene-1-[[(2~{R},3~{S})-3-oxidanyl-4-oxidanylidene-1-phenyl-4-(1,3-thiazol-2-ylmethylamino)butan-2-yl]amino]propan-2-yl]cyclohexane-1-carboxamide, 3C-like proteinase nsp5
Authors:Zeng, R, Xie, L.W, Huang, C, Wang, K, Liu, Y.Z, Yang, S.Y, Lei, J.
Deposit date:2022-11-17
Release date:2023-03-29
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.258 Å)
Cite:A new generation M pro inhibitor with potent activity against SARS-CoV-2 Omicron variants.
Signal Transduct Target Ther, 8, 2023
4NEQ
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BU of 4neq by Molmil
The structure of UDP-GlcNAc 2-epimerase from Methanocaldococcus jannaschii
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, UDP-N-acetylglucosamine 2-epimerase
Authors:Chen, S.C, Yang, C.S, Huang, C.H, Chen, Y.
Deposit date:2013-10-29
Release date:2014-04-23
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.85 Å)
Cite:Crystal structures of the archaeal UDP-GlcNAc 2-epimerase from Methanocaldococcus jannaschii reveal a conformational change induced by UDP-GlcNAc.
Proteins, 82, 2014
6IRQ
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BU of 6irq by Molmil
Complexed crystal structure of PaSSB with ssDNA dT25 at 1.91 angstrom resolution
Descriptor: DNA (25-MER), Single-stranded DNA-binding protein
Authors:Huang, Y.H, Huang, C.Y.
Deposit date:2018-11-14
Release date:2019-12-11
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.91 Å)
Cite:Characterization of an SSB-dT25 complex: structural insights into the S-shaped ssDNA binding conformation.
Rsc Adv, 9, 2019
3FDD
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BU of 3fdd by Molmil
The Crystal Structure of the Pseudomonas dacunhae Aspartate-Beta-Decarboxylase Reveals a Novel Oligomeric Assembly for a Pyridoxal-5-Phosphate Dependent Enzyme
Descriptor: ACETATE ION, CHLORIDE ION, L-aspartate-beta-decarboxylase, ...
Authors:Lima, S, Sundararaju, B, Huang, C, Khristoforov, R, Momany, C, Phillips, R.S.
Deposit date:2008-11-25
Release date:2009-03-17
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:The crystal structure of the Pseudomonas dacunhae aspartate-beta-decarboxylase dodecamer reveals an unknown oligomeric assembly for a pyridoxal-5'-phosphate-dependent enzyme.
J.Mol.Biol., 388, 2009
5XGT
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Crystal structure of the N-terminal domain of Staphylococcus aureus single-stranded DNA-binding protein SsbA at 1.82 angstrom resolution
Descriptor: GLYCEROL, Single-stranded DNA-binding protein
Authors:Huang, Y.H, Chen, C.J, Huang, C.Y.
Deposit date:2017-04-17
Release date:2017-08-09
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.82 Å)
Cite:Staphylococcus aureus single-stranded DNA-binding protein SsbA can bind but cannot stimulate PriA helicase.
PLoS ONE, 12, 2017
3AMD
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BU of 3amd by Molmil
Crystal structures of Thermotoga maritima Cel5A, apo form and tetramer/au
Descriptor: Endoglucanase
Authors:Wu, T.H, Huang, C.H, Ko, T.P, Lai, H.L, Ma, Y, Cheng, Y.S, Liu, J.R, Guo, R.T.
Deposit date:2010-08-19
Release date:2011-08-10
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Diverse substrate recognition mechanism revealed by Thermotoga maritima Cel5A structures in complex with cellotetraose, cellobiose and mannotriose
Biochim.Biophys.Acta, 1814, 2011
3JWO
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BU of 3jwo by Molmil
Structure of HIV-1 gp120 with gp41-Interactive Region: Layered Architecture and Basis of Conformational Mobility
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, FAB 48D Heavy CHAIN, FAB 48D LIGHT CHAIN, ...
Authors:Pancera, M, Majeed, S, Huang, C.C, Kwon, Y.D, Zhou, T, Robinson, J.E, Sodroski, J, Wyatt, R, Kwong, P.D.
Deposit date:2009-09-18
Release date:2009-12-29
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (3.51 Å)
Cite:Structure of HIV-1 gp120 with gp41-interactive region reveals layered envelope architecture and basis of conformational mobility.
Proc.Natl.Acad.Sci.USA, 107, 2010
3WZL
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ZEN lactonase
Descriptor: Zearalenone hydrolase
Authors:Ko, T.P, Huang, C.H, Liu, J.R, Guo, R.T.
Deposit date:2014-10-01
Release date:2014-11-26
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Crystal structure and substrate-binding mode of the mycoestrogen-detoxifying lactonase ZHD from Clonostachys rosea
RSC ADV, 4, 2014
3WZM
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BU of 3wzm by Molmil
ZEN lactonase mutant complex
Descriptor: (3S,11E)-14,16-dihydroxy-3-methyl-3,4,5,6,9,10-hexahydro-1H-2-benzoxacyclotetradecine-1,7(8H)-dione, Zearalenone hydrolase
Authors:Ko, T.P, Huang, C.H, Liu, J.R, Guo, R.T.
Deposit date:2014-10-01
Release date:2014-11-26
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.48 Å)
Cite:Crystal structure and substrate-binding mode of the mycoestrogen-detoxifying lactonase ZHD from Clonostachys rosea
RSC ADV, 4, 2014
6AEQ
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BU of 6aeq by Molmil
Crystal structure of the ssDNA-binding domain of DnaT from Salmonella enterica Serovar Typhimurium LT2
Descriptor: Primosomal protein 1
Authors:Huang, Y.H, Huang, C.Y.
Deposit date:2018-08-06
Release date:2019-03-20
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.2518084 Å)
Cite:Crystal structure of the C-terminal domain of the primosomal DnaT protein: Insights into a new oligomerization mechanism.
Biochem. Biophys. Res. Commun., 511, 2019
4NES
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BU of 4nes by Molmil
Crystal structure of Methanocaldococcus jannaschii UDP-GlcNAc 2-epimerase in complex with UDP-GlcNAc and UDP
Descriptor: UDP-N-acetylglucosamine 2-epimerase, URIDINE-5'-DIPHOSPHATE, URIDINE-DIPHOSPHATE-N-ACETYLGLUCOSAMINE
Authors:Chen, S.C, Yang, C.S, Huang, C.H, Chen, Y.
Deposit date:2013-10-30
Release date:2014-04-23
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (1.42 Å)
Cite:Crystal structures of the archaeal UDP-GlcNAc 2-epimerase from Methanocaldococcus jannaschii reveal a conformational change induced by UDP-GlcNAc.
Proteins, 82, 2014
2CRT
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BU of 2crt by Molmil
CARDIOTOXIN III FROM TAIWAN COBRA (NAJA NAJA ATRA) DETERMINATION OF STRUCTURE IN SOLUTION AND COMPARISON WITH SHORT NEUROTOXINS
Descriptor: CARDIOTOXIN III
Authors:Bhaskaran, R, Huang, C.C, Chang, K.D, Yu, C.
Deposit date:1994-03-12
Release date:1994-11-01
Last modified:2024-10-30
Method:SOLUTION NMR
Cite:Cardiotoxin III from the Taiwan cobra (Naja naja atra). Determination of structure in solution and comparison with short neurotoxins.
J.Mol.Biol., 235, 1994
1N8W
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BU of 1n8w by Molmil
Biochemical and Structural Studies of Malate Synthase from Mycobacterium tuberculosis
Descriptor: COENZYME A, D-MALATE, GLYOXYLIC ACID, ...
Authors:Smith, C.V, Huang, C.C, Miczak, A, Russell, D.G, Sacchettini, J.C, Honer zu Bentrup, K, TB Structural Genomics Consortium (TBSGC)
Deposit date:2002-11-21
Release date:2002-12-18
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Biochemical and structural studies of malate synthase from Mycobacterium tuberculosis
J.Biol.Chem., 278, 2003
2CRS
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BU of 2crs by Molmil
CARDIOTOXIN III FROM TAIWAN COBRA (NAJA NAJA ATRA) DETERMINATION OF STRUCTURE IN SOLUTION AND COMPARISON WITH SHORT NEUROTOXINS
Descriptor: CARDIOTOXIN III
Authors:Bhaskaran, R, Huang, C.C, Chang, K.D, Yu, C.
Deposit date:1994-03-12
Release date:1994-11-01
Last modified:2024-10-30
Method:SOLUTION NMR
Cite:Cardiotoxin III from the Taiwan cobra (Naja naja atra). Determination of structure in solution and comparison with short neurotoxins.
J.Mol.Biol., 235, 1994
5YUN
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BU of 5yun by Molmil
Crystal structure of SSB complexed with myc
Descriptor: 3,5,7-TRIHYDROXY-2-(3,4,5-TRIHYDROXYPHENYL)-4H-CHROMEN-4-ONE, Single-stranded DNA-binding protein
Authors:Huang, Y.H, Huang, C.Y.
Deposit date:2017-11-22
Release date:2018-10-10
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.67 Å)
Cite:Crystal structure of SSB complexed with inhibitor myricetin.
Biochem. Biophys. Res. Commun., 504, 2018
3JWD
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Structure of HIV-1 gp120 with gp41-Interactive Region: Layered Architecture and Basis of Conformational Mobility
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, FAB 48D HEAVY CHAIN, FAB 48D LIGHT CHAIN, ...
Authors:Pancera, M, Majeed, S, Ban, Y.A, Chen, L, Huang, C.C, Kong, L, Kwon, Y.D, Stuckey, J, Zhou, T, Robinson, J.E, Schief, W.R, Sodroski, J, Wyatt, R, Kwong, P.D.
Deposit date:2009-09-18
Release date:2009-12-29
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.61 Å)
Cite:Structure of HIV-1 gp120 with gp41-interactive region reveals layered envelope architecture and basis of conformational mobility.
Proc.Natl.Acad.Sci.USA, 107, 2010

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