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PDB: 220 results

3Q3F
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BU of 3q3f by Molmil
Engineering Domain-Swapped Binding Interfaces by Mutually Exclusive Folding: Insertion of Ubiquitin into position 103 of Barnase
Descriptor: Ribonuclease/Ubiquitin chimeric protein, SULFATE ION
Authors:Ha, J.-H, Karchin, J.M, Walker-Kopp, N, Huang, L.-S, Berry, E.A, Loh, S.N.
Deposit date:2010-12-21
Release date:2012-01-25
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.169 Å)
Cite:Engineering domain-swapped binding interfaces by mutually exclusive folding.
J.Mol.Biol., 416, 2012
3F4H
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BU of 3f4h by Molmil
Crystal structure of the FMN riboswitch bound to roseoflavin
Descriptor: 1-deoxy-1-[8-(dimethylamino)-7-methyl-2,4-dioxo-3,4-dihydrobenzo[g]pteridin-10(2H)-yl]-D-ribitol, FMN riboswitch, MAGNESIUM ION, ...
Authors:Serganov, A.A, Huang, L.
Deposit date:2008-10-31
Release date:2009-01-27
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (3 Å)
Cite:Coenzyme recognition and gene regulation by a flavin mononucleotide riboswitch.
Nature, 458, 2009
3F2X
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Crystal structure of the FMN riboswitch bound to FMN, Cs+ soak.
Descriptor: CESIUM ION, FLAVIN MONONUCLEOTIDE, FMN riboswitch, ...
Authors:Serganov, A.A, Huang, L.
Deposit date:2008-10-30
Release date:2009-01-27
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (3.11 Å)
Cite:Coenzyme recognition and gene regulation by a flavin mononucleotide riboswitch.
Nature, 458, 2009
3F2Y
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Crystal structure of the FMN riboswitch bound to FMN, Mn2+ soak.
Descriptor: FLAVIN MONONUCLEOTIDE, FMN riboswitch, MAGNESIUM ION, ...
Authors:Serganov, A.A, Huang, L.
Deposit date:2008-10-30
Release date:2009-01-27
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Coenzyme recognition and gene regulation by a flavin mononucleotide riboswitch.
Nature, 458, 2009
3F59
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BU of 3f59 by Molmil
Crystal structure of ZU5-ANK, the spectrin binding region of human erythroid ankyrin
Descriptor: Ankyrin-1, BROMIDE ION
Authors:Ipsaro, J.J, Huang, L, Mondragon, A.
Deposit date:2008-11-03
Release date:2009-02-24
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structures of the spectrin-ankyrin interaction binding domains.
Blood, 113, 2009
3F4E
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BU of 3f4e by Molmil
Crystal structure of the FMN riboswitch bound to FMN, split RNA.
Descriptor: FLAVIN MONONUCLEOTIDE, FMN riboswitch, MAGNESIUM ION, ...
Authors:Serganov, A.A, Huang, L.
Deposit date:2008-10-31
Release date:2009-01-27
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (3.05 Å)
Cite:Coenzyme recognition and gene regulation by a flavin mononucleotide riboswitch.
Nature, 458, 2009
3F2Q
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BU of 3f2q by Molmil
Crystal structure of the FMN riboswitch bound to FMN
Descriptor: FLAVIN MONONUCLEOTIDE, FMN riboswitch, MAGNESIUM ION, ...
Authors:Serganov, A.A, Huang, L.
Deposit date:2008-10-30
Release date:2009-01-27
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.95 Å)
Cite:Coenzyme recognition and gene regulation by a flavin mononucleotide riboswitch.
Nature, 458, 2009
3F4G
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BU of 3f4g by Molmil
Crystal structure of the FMN riboswitch bound to riboflavin.
Descriptor: FMN riboswitch, MAGNESIUM ION, POTASSIUM ION, ...
Authors:Serganov, A.A, Huang, L.
Deposit date:2008-10-31
Release date:2009-01-27
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (3.01 Å)
Cite:Coenzyme recognition and gene regulation by a flavin mononucleotide riboswitch.
Nature, 458, 2009
3F30
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Crystal structure of the FMN riboswitch bound to FMN, cobalt hexammine soak.
Descriptor: COBALT HEXAMMINE(III), FLAVIN MONONUCLEOTIDE, FMN riboswitch, ...
Authors:Serganov, A.A, Huang, L.
Deposit date:2008-10-30
Release date:2009-01-27
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (3.15 Å)
Cite:Coenzyme recognition and gene regulation by a flavin mononucleotide riboswitch.
Nature, 458, 2009
3F2T
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BU of 3f2t by Molmil
Crystal structure of the FMN riboswitch bound to FMN, iridium hexamine soak.
Descriptor: FLAVIN MONONUCLEOTIDE, FMN riboswitch, IRIDIUM HEXAMMINE ION, ...
Authors:Serganov, A.A, Huang, L.
Deposit date:2008-10-30
Release date:2009-01-27
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (3 Å)
Cite:Coenzyme recognition and gene regulation by a flavin mononucleotide riboswitch.
Nature, 458, 2009
6A2H
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BU of 6a2h by Molmil
Architectural roles of Cren7 in folding crenarchaeal chromatin filament
Descriptor: Chromatin protein Cren7, DNA (5'-D(P*AP*AP*TP*TP*AP*C)-3'), DNA (5'-D(P*GP*TP*AP*AP*TP*T)-3')
Authors:Zhang, Z.F, Zhao, M.H, Chen, Y.Y, Wang, L, Dong, Y.H, Gong, Y, Huang, L.
Deposit date:2018-06-11
Release date:2019-01-16
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Architectural roles of Cren7 in folding crenarchaeal chromatin filament.
Mol. Microbiol., 111, 2019
6A2I
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Architectural roles of Cren7 in folding crenarchaeal chromatin filament
Descriptor: Chromatin protein Cren7, DNA (5'-D(*CP*GP*TP*AP*GP*CP*TP*AP*AP*TP*TP*AP*GP*CP*TP*AP*CP*G)-3')
Authors:Zhang, Z.F, Zhao, M.H, Chen, Y.Y, Wang, L, Dong, Y.H, Gong, Y, Huang, L.
Deposit date:2018-06-11
Release date:2019-01-16
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Architectural roles of Cren7 in folding crenarchaeal chromatin filament.
Mol. Microbiol., 111, 2019
8HB1
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BU of 8hb1 by Molmil
Crystal structure of NAD-II riboswitch (two strands) with NMN
Descriptor: BETA-NICOTINAMIDE RIBOSE MONOPHOSPHATE, MAGNESIUM ION, RNA (30-MER), ...
Authors:Peng, X, Lilley, D.M.J, Huang, L.
Deposit date:2022-10-27
Release date:2023-03-22
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (2.23 Å)
Cite:Crystal structures of the NAD+-II riboswitch reveal two distinct ligand-binding pockets.
Nucleic Acids Res., 51, 2023
8HBA
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BU of 8hba by Molmil
Crystal structure of NAD-II riboswitch (single strand) with NAD
Descriptor: BETA-NICOTINAMIDE RIBOSE MONOPHOSPHATE, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, RNA (55-MER)
Authors:Peng, X, Lilley, D.M.J, Huang, L.
Deposit date:2022-10-27
Release date:2023-03-22
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.64 Å)
Cite:Crystal structures of the NAD+-II riboswitch reveal two distinct ligand-binding pockets.
Nucleic Acids Res., 51, 2023
8HB3
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BU of 8hb3 by Molmil
Crystal structure of NAD-II riboswitch (two strands) with NR
Descriptor: Nicotinamide riboside, RNA (31-MER), RNA (5'-R(*AP*GP*AP*GP*CP*GP*UP*UP*GP*CP*GP*UP*CP*CP*GP*AP*AP*AP*GP*UP*(CBV)P*GP*CP*C)-3')
Authors:Peng, X, Lilley, D.M.J, Huang, L.
Deposit date:2022-10-27
Release date:2023-03-22
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.87 Å)
Cite:Crystal structures of the NAD+-II riboswitch reveal two distinct ligand-binding pockets.
Nucleic Acids Res., 51, 2023
8HB8
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BU of 8hb8 by Molmil
Crystal structure of NAD-II riboswitch (single strand) with NMN
Descriptor: BARIUM ION, BETA-NICOTINAMIDE RIBOSE MONOPHOSPHATE, RNA (55-MER)
Authors:Peng, X, Lilley, D.M.J, Huang, L.
Deposit date:2022-10-27
Release date:2023-03-22
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal structures of the NAD+-II riboswitch reveal two distinct ligand-binding pockets.
Nucleic Acids Res., 51, 2023
3J6C
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BU of 3j6c by Molmil
Cryo-EM structure of MAVS CARD filament
Descriptor: Mitochondrial antiviral-signaling protein
Authors:Xu, H, He, X, Zheng, H, Huang, L.J, Hou, F, Yu, Z, de la Cruz, M.J, Borkowski, B, Zhang, X, Chen, Z.J, Jiang, Q.-X.
Deposit date:2014-02-04
Release date:2014-03-05
Last modified:2024-02-21
Method:ELECTRON MICROSCOPY (9.6 Å)
Cite:Structural basis for the prion-like MAVS filaments in antiviral innate immunity.
Elife, 3, 2014
6L62
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BU of 6l62 by Molmil
Neutralization mechanism of a monoclonal antibody targeting a porcine circovirus type 2 Cap protein conformational epitope
Descriptor: Capsid protein, Heavy chain of Fab fragment, Light chain of Fab fragment
Authors:Sun, Z, Huang, L, Xia, D, Wei, Y, Sun, E, Zhu, H, Bian, H, Wu, H, Feng, L, Wang, J, Liu, C.
Deposit date:2019-10-25
Release date:2020-02-12
Last modified:2020-04-29
Method:ELECTRON MICROSCOPY (7.2 Å)
Cite:Neutralization Mechanism of a Monoclonal Antibody Targeting a Porcine Circovirus Type 2 Cap Protein Conformational Epitope.
J.Virol., 94, 2020
1DJ0
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BU of 1dj0 by Molmil
THE CRYSTAL STRUCTURE OF E. COLI PSEUDOURIDINE SYNTHASE I AT 1.5 ANGSTROM RESOLUTION
Descriptor: CHLORIDE ION, PSEUDOURIDINE SYNTHASE I
Authors:Foster, P.G, Huang, L, Santi, D.V, Stroud, R.M.
Deposit date:1999-11-30
Release date:2000-05-31
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:The structural basis for tRNA recognition and pseudouridine formation by pseudouridine synthase I.
Nat.Struct.Biol., 7, 2000
8I3Z
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BU of 8i3z by Molmil
Crystal structure of NAD-II riboswitch (two strands) with NMN at 1.67 angstrom
Descriptor: BETA-NICOTINAMIDE RIBOSE MONOPHOSPHATE, RNA (31-MER), RNA (5'-R(*AP*GP*AP*GP*CP*GP*UP*UP*GP*CP*GP*UP*CP*CP*GP*AP*AP*AP*GP*UP*(CBV)P*GP*CP*C)-3'), ...
Authors:Peng, X, Lilley, D.M.J, Huang, L.
Deposit date:2023-01-18
Release date:2023-03-22
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (1.67 Å)
Cite:Crystal structures of the NAD+-II riboswitch reveal two distinct ligand-binding pockets.
Nucleic Acids Res., 51, 2023
1NH9
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BU of 1nh9 by Molmil
Crystal Structure of a DNA Binding Protein Mja10b from the hyperthermophile Methanococcus jannaschii
Descriptor: DNA-binding protein Alba
Authors:Wang, G, Bartlam, M, Guo, R, Yang, H, Xue, H, Liu, Y, Huang, L, Rao, Z.
Deposit date:2002-12-19
Release date:2003-12-23
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of a DNA binding protein from the hyperthermophilic euryarchaeon Methanococcus jannaschii
Protein Sci., 12, 2003
4E9M
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BU of 4e9m by Molmil
NOD1 card domain with three disulfide-clinched, domain-swapped dimers in the asymmetric unit
Descriptor: CITRATE ANION, Nucleotide-binding oligomerization domain-containing protein 1
Authors:Berry, E.A, Huang, L.S, Walker-Kopp, N.
Deposit date:2012-03-21
Release date:2012-04-04
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Crystal structure of nod1 card domain with three disulfide-clinched, domain-swapped dimers in the asymmetric unit
To be Published
6U7V
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BU of 6u7v by Molmil
xRRM structure of spPof8
Descriptor: NITRATE ION, Protein pof8
Authors:Kim, J.-K, Hu, X, Yu, C, Jun, H.-I, Liu, J, Sankaran, B, Huang, L, Qiao, F.
Deposit date:2019-09-03
Release date:2020-09-09
Last modified:2021-03-24
Method:X-RAY DIFFRACTION (1.42 Å)
Cite:Quality-Control Mechanism for Telomerase RNA Folding in the Cell.
Cell Rep, 33, 2020
6LM3
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BU of 6lm3 by Molmil
Neutralization mechanism of a monoclonal antibody targeting a porcine circovirus type 2 Cap protein conformational epitope
Descriptor: Capsid protein
Authors:Sun, Z, Huang, L, Xia, D, Wei, Y, Sun, E, Zhu, H, Bian, H, Wu, H, Feng, L, Wang, J, Liu, C.
Deposit date:2019-12-24
Release date:2020-02-12
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (6.7 Å)
Cite:Neutralization Mechanism of a Monoclonal Antibody Targeting a Porcine Circovirus Type 2 Cap Protein Conformational Epitope.
J.Virol., 94, 2020
7V9E
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BU of 7v9e by Molmil
Crystal structure of a methyl transferase ribozyme
Descriptor: BARIUM ION, GUANINE, RNA (68-MER), ...
Authors:Deng, J, Lilley, D.M.J, Huang, L.
Deposit date:2021-08-25
Release date:2022-03-23
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structure and mechanism of a methyltransferase ribozyme.
Nat.Chem.Biol., 18, 2022

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