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PDB: 26 results

5I9J
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BU of 5i9j by Molmil
Structure of the cholesterol and lutein-binding domain of human STARD3 at 1.74A
Descriptor: 1,2-ETHANEDIOL, L(+)-TARTARIC ACID, SULFATE ION, ...
Authors:Horvath, M.P, Bernstein, P.S, Li, B, George, E.W, Tran, Q.T.
Deposit date:2016-02-20
Release date:2016-03-16
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.74 Å)
Cite:Structure of the lutein-binding domain of human StARD3 at 1.74 angstrom resolution and model of a complex with lutein.
Acta Crystallogr.,Sect.F, 72, 2016
1JB7
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BU of 1jb7 by Molmil
DNA G-Quartets in a 1.86 A Resolution Structure of an Oxytricha nova Telomeric Protein-DNA Complex
Descriptor: 5'-D(*GP*GP*GP*GP*TP*TP*TP*TP*GP*GP*GP*G)-3', CHLORIDE ION, SODIUM ION, ...
Authors:Horvath, M.P, Schultz, S.C.
Deposit date:2001-06-02
Release date:2001-06-11
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (1.86 Å)
Cite:DNA G-quartets in a 1.86 A resolution structure of an Oxytricha nova telomeric protein-DNA complex.
J.Mol.Biol., 310, 2001
1OTC
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BU of 1otc by Molmil
THE O. NOVA TELOMERE END BINDING PROTEIN COMPLEXED WITH SINGLE STRAND DNA
Descriptor: DNA (5'-D(*GP*GP*GP*GP*TP*TP*TP*TP*GP*GP*GP*G)-3'), PROTEIN (TELOMERE-BINDING PROTEIN ALPHA SUBUNIT), PROTEIN (TELOMERE-BINDING PROTEIN BETA SUBUNIT)
Authors:Horvath, M.P, Schweiker, V.L, Bevilacqua, J.M, Ruggles, J.A, Schultz, S.C.
Deposit date:1998-11-25
Release date:1999-04-12
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Crystal structure of the Oxytricha nova telomere end binding protein complexed with single strand DNA.
Cell(Cambridge,Mass.), 95, 1998
2I0Q
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Crystal structure of a telomere single-strand DNA-protein complex from O. nova with full-length alpha and beta telomere proteins
Descriptor: 1,2-ETHANEDIOL, 5'-D(*GP*GP*GP*TP*TP*TP*TP*GP*GP*GP*G)-3', CHLORIDE ION, ...
Authors:Horvath, M.P, Buczek, P.
Deposit date:2006-08-11
Release date:2006-08-22
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.91 Å)
Cite:Structural reorganization and the cooperative binding of single-stranded telomere DNA in Sterkiella nova.
J.Biol.Chem., 281, 2006
6U7T
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BU of 6u7t by Molmil
MutY adenine glycosylase bound to DNA containing a transition state analog (1N) paired with d(8-oxo-G)
Descriptor: Adenine DNA glycosylase, CALCIUM ION, DNA (5'-D(*AP*AP*GP*AP*CP*(8OG)P*TP*GP*GP*AP*C)-3'), ...
Authors:O'Shea Murray, V.L, Cao, S, Horvath, M.P, David, S.S.
Deposit date:2019-09-03
Release date:2019-10-02
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural Basis for Finding OG Lesions and Avoiding Undamaged G by the DNA Glycosylase MutY.
Acs Chem.Biol., 15, 2020
2FI3
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BU of 2fi3 by Molmil
Crystal structure of a BPTI variant (Cys14->Ser, Cys38->Ser) in complex with trypsin
Descriptor: 1,2-ETHANEDIOL, CALCIUM ION, Cationic trypsin, ...
Authors:Zakharova, E, Horvath, M.P, Goldenberg, D.P.
Deposit date:2005-12-27
Release date:2006-01-24
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.58 Å)
Cite:Functional and structural roles of the Cys14-Cys38 disulfide of bovine pancreatic trypsin inhibitor.
J.Mol.Biol., 382, 2008
6Q0C
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BU of 6q0c by Molmil
MutY adenine glycosylase bound to DNA containing a transition state analog (1N) paired with undamaged dG
Descriptor: 1,2-ETHANEDIOL, A/G-specific adenine glycosylase, CALCIUM ION, ...
Authors:O'Shea Murray, V.L, Russelburg, L.P, Horvath, M.P, David, S.S.
Deposit date:2019-08-01
Release date:2019-08-28
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural Basis for Finding OG Lesions and Avoiding Undamaged G by the DNA Glycosylase MutY.
Acs Chem.Biol., 15, 2020
2FI4
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BU of 2fi4 by Molmil
Crystal structure of a BPTI variant (Cys14->Ser) in complex with trypsin
Descriptor: 1,2-ETHANEDIOL, CALCIUM ION, Cationic trypsin, ...
Authors:Zakharova, E, Horvath, M.P, Goldenberg, D.P.
Deposit date:2005-12-27
Release date:2006-01-24
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.58 Å)
Cite:Functional and structural roles of the Cys14-Cys38 disulfide of bovine pancreatic trypsin inhibitor.
J.Mol.Biol., 382, 2008
3FP6
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BU of 3fp6 by Molmil
Anionic trypsin in complex with bovine pancreatic trypsin inhibitor (BPTI) determined to the 1.49 A resolution limit
Descriptor: 1,2-ETHANEDIOL, Anionic trypsin-2, CALCIUM ION, ...
Authors:Zakharova, E, Horvath, M.P, Goldenberg, D.P.
Deposit date:2009-01-04
Release date:2009-02-17
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.49 Å)
Cite:Structure of a serine protease poised to resynthesize a peptide bond.
Proc.Natl.Acad.Sci.USA, 106, 2009
3FP8
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BU of 3fp8 by Molmil
Anionic trypsin variant S195A in complex with bovine pancreatic trypsin inhibitor (BPTI) determined to the 1.46 A resolution limit
Descriptor: 1,2-ETHANEDIOL, Anionic trypsin-2, CALCIUM ION, ...
Authors:Zakharova, E, Horvath, M.P, Goldenberg, D.P, Curtice, K.
Deposit date:2009-01-04
Release date:2009-02-17
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.46 Å)
Cite:Structure of a serine protease poised to resynthesize a peptide bond.
Proc.Natl.Acad.Sci.USA, 106, 2009
3FP7
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BU of 3fp7 by Molmil
Anionic trypsin variant S195A in complex with bovine pancreatic trypsin inhibitor (BPTI) cleaved at the scissile bond (LYS15-ALA16) determined to the 1.46 A resolution limit
Descriptor: 1,2-ETHANEDIOL, Anionic trypsin-2, CALCIUM ION, ...
Authors:Zakharova, E, Horvath, M.P, Goldenberg, D.P.
Deposit date:2009-01-04
Release date:2009-02-17
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.46 Å)
Cite:Structure of a serine protease poised to resynthesize a peptide bond.
Proc.Natl.Acad.Sci.USA, 106, 2009
8DVP
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BU of 8dvp by Molmil
Glycosylase MutY variant N146S in complex with DNA containing d(8-oxo-G) paired with substrate purine
Descriptor: ACETATE ION, Adenine DNA glycosylase, CALCIUM ION, ...
Authors:Demir, M, Russelburg, L.P, Horvath, M.P, David, S.S.
Deposit date:2022-07-29
Release date:2022-11-30
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.54 Å)
Cite:Structural snapshots of base excision by the cancer-associated variant MutY N146S reveal a retaining mechanism.
Nucleic Acids Res., 51, 2023
8DW0
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BU of 8dw0 by Molmil
Glycosylase MutY variant N146S in complex with DNA containing d(8-oxo-G) paired with an enzyme-generated abasic site (AP) product and crystallized with sodium acetate
Descriptor: 1,2-ETHANEDIOL, Adenine DNA glycosylase, DNA (5'-D(*AP*AP*GP*AP*CP*(8OG)P*TP*GP*GP*AP*C)-3'), ...
Authors:Demir, M, Russelburg, L.P, Horvath, M.P, David, S.S.
Deposit date:2022-07-30
Release date:2022-11-30
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.68 Å)
Cite:Structural snapshots of base excision by the cancer-associated variant MutY N146S reveal a retaining mechanism.
Nucleic Acids Res., 51, 2023
8DW7
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BU of 8dw7 by Molmil
DNA glycosylase MutY variant N146S in complex with DNA containing the transition state analog 1N paired with d(8-oxo-G)
Descriptor: 1,2-ETHANEDIOL, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Adenine DNA glycosylase, ...
Authors:Demir, M, Russelburg, L.P, Horvath, M.P, David, S.S.
Deposit date:2022-07-31
Release date:2022-11-30
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.96 Å)
Cite:Structural snapshots of base excision by the cancer-associated variant MutY N146S reveal a retaining mechanism.
Nucleic Acids Res., 51, 2023
8DVY
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BU of 8dvy by Molmil
DNA glycosylase MutY variant N146S in complex with DNA containing d(8-oxo-G) paired with an enzyme-generated abasic site product (AP) and crystalized with calcium acetate
Descriptor: ACETATE ION, Adenine DNA glycosylase, CALCIUM ION, ...
Authors:Demir, M, Russelburg, L.P, Horvath, M.P, David, S.S.
Deposit date:2022-07-30
Release date:2022-11-30
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.36 Å)
Cite:Structural snapshots of base excision by the cancer-associated variant MutY N146S reveal a retaining mechanism.
Nucleic Acids Res., 51, 2023
8DW4
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BU of 8dw4 by Molmil
Glycosylase MutY variant N146S in complex with DNA containing d(8-oxo-G) paired with an abasic site product (AP) generated by the enzyme in crystals by removal of calcium
Descriptor: ACETATE ION, Adenine DNA glycosylase, DNA (5'-D(*AP*AP*GP*AP*CP*(8OG)P*TP*GP*GP*AP*C)-3'), ...
Authors:Demir, M, Russelburg, L.P, Horvath, M.P, David, S.S.
Deposit date:2022-07-31
Release date:2022-11-30
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.49 Å)
Cite:Structural snapshots of base excision by the cancer-associated variant MutY N146S reveal a retaining mechanism.
Nucleic Acids Res., 51, 2023
8DWD
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BU of 8dwd by Molmil
Adenine glycosylase MutY variant E43S in complex with DNA containing d(8-oxo-G) paired with an AP site generated by the enzyme acting on purine
Descriptor: ACETATE ION, Adenine DNA glycosylase, CALCIUM ION, ...
Authors:Russelburg, L.P, Demir, M, David, S.S, Horvath, M.P.
Deposit date:2022-08-01
Release date:2023-08-09
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (1.68 Å)
Cite:Structural Basis for Base Engagement and Stereochemistry Revealed by Alteration of Catalytic Residue Glu43 in DNA Repair Glycosylase MutY
To Be Published
8DWF
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BU of 8dwf by Molmil
Glycosylase MutY variant E43S in complex with DNA containing d(8-oxo-G) paired with substrate adenine
Descriptor: 1,2-ETHANEDIOL, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Adenine DNA glycosylase, ...
Authors:Russelburg, L.P, Demir, M, David, S.S, Horvath, M.P.
Deposit date:2022-08-01
Release date:2023-08-09
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structural Basis for Base Engagement and Stereochemistry Revealed by Alteration of Catalytic Residue Glu43 in DNA Repair Glycosylase MutY
To Be Published
8DWE
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BU of 8dwe by Molmil
Adenine glycosylase MutY variant E43Q in complex with DNA containing d(8-oxo-G) paired with substrate purine
Descriptor: 1,2-ETHANEDIOL, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Adenine DNA glycosylase, ...
Authors:Russelburg, L.P, Demir, M, David, S.S, Horvath, M.P.
Deposit date:2022-08-01
Release date:2023-08-09
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structural Basis for Base Engagement and Stereochemistry Revealed by Alteration of Catalytic Residue Glu43 in DNA Repair Glycosylase MutY
To Be Published
9BS2
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BU of 9bs2 by Molmil
Glycosylase MutY variant R149Q in complex with DNA containing d(8-oxo-G) paired with a product analog (THF) to 1.51 A resolution
Descriptor: ACETIC ACID, Adenine DNA glycosylase, CALCIUM ION, ...
Authors:Trasvina-Arenas, C.H, Tamayo, N, Lin, W.J, Demir, M, Fisher, A.J, David, S.S, Horvath, M.P.
Deposit date:2024-05-12
Release date:2024-10-30
Method:X-RAY DIFFRACTION (1.51 Å)
Cite:Structural and functional profiling of MUTYH cancer-associated variants reveal an allosteric role for its [4Fe-4S] cluster cofactor
To Be Published
1Y62
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BU of 1y62 by Molmil
A 2.4 crystal structure of conkunitzin-S1, a novel Kunitz-fold cone snail neurotoxin.
Descriptor: Conkunitzin-S1, SULFATE ION
Authors:Dy, C.Y, Buczek, P, Horvath, M.P.
Deposit date:2004-12-03
Release date:2005-07-12
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:Structure of conkunitzin-S1, a neurotoxin and Kunitz-fold disulfide variant from cone snail.
Acta Crystallogr.,Sect.D, 62, 2006
8FAY
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BU of 8fay by Molmil
Human MUTYH adenine glycosylase bound to DNA containing a transition state analog (1N) paired with d(8-oxo-G)
Descriptor: Adenine DNA glycosylase, DNA (5'-D(*AP*AP*GP*AP*CP*(8OG)P*TP*GP*GP*AP*C)-3'), DNA (5'-D(P*GP*TP*CP*CP*AP*(NR1)P*GP*TP*CP*T)-3'), ...
Authors:Trasvina-Arenas, C.H, Lin, W.J, Demir, M, Fisher, A.J, David, S.S, Horvath, M.P.
Deposit date:2022-11-29
Release date:2024-05-29
Method:X-RAY DIFFRACTION (1.91 Å)
Cite:Human MUTYH adenine glycosylase bound to DNA containing a transition state analog (1N) paired with d(8-oxo-G)
To Be Published
2M7R
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BU of 2m7r by Molmil
Nmda receptor antagonist, conantokin bk-b, nmr, 20 structure
Descriptor: CONANTOKIN BK-B
Authors:Curtice, K.J, Platt, R.J, Skalicky, J.J, Horvath, M.P, Twede, V.D.
Deposit date:2013-04-29
Release date:2014-02-19
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:From molecular phylogeny towards differentiating pharmacology for NMDA receptor subtypes.
Toxicon, 81C, 2014
2FI5
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BU of 2fi5 by Molmil
Crystal structure of a BPTI variant (Cys38->Ser) in complex with trypsin
Descriptor: 1,2-ETHANEDIOL, CALCIUM ION, Cationic trypsin, ...
Authors:Zakharova, E, Horvath, M.P, Goldenberg, D.P.
Deposit date:2005-12-27
Release date:2006-01-24
Last modified:2024-11-20
Method:X-RAY DIFFRACTION (1.58 Å)
Cite:Functional and structural roles of the Cys14-Cys38 disulfide of bovine pancreatic trypsin inhibitor.
J.Mol.Biol., 382, 2008
2FTM
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BU of 2ftm by Molmil
Crystal structure of trypsin complexed with the BPTI variant (Tyr35->Gly)
Descriptor: 1,2-ETHANEDIOL, CALCIUM ION, Cationic trypsin, ...
Authors:Hanson, W.M, Horvath, M.P, Goldenberg, D.P.
Deposit date:2006-01-24
Release date:2006-02-14
Last modified:2024-11-20
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Rigidification of a Flexible Protease Inhibitor Variant upon Binding to Trypsin.
J.Mol.Biol., 366, 2007

 

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