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PDB: 174 results

4I07
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BU of 4i07 by Molmil
Structure of mature form of cathepsin B1 from Schistosoma mansoni
Descriptor: ACETATE ION, CHLORIDE ION, Cathepsin B-like peptidase (C01 family)
Authors:Rezacova, P, Jilkova, A, Brynda, J, Horn, M, Mares, M.
Deposit date:2012-11-16
Release date:2014-02-05
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Activation route of the Schistosoma mansoni cathepsin B1 drug target: structural map with a glycosaminoglycan switch
Structure, 22, 2014
4I05
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BU of 4i05 by Molmil
Structure of intermediate processing form of cathepsin B1 from Schistosoma mansoni
Descriptor: Cathepsin B-like peptidase (C01 family), SODIUM ION
Authors:Rezacova, P, Jilkova, A, Brynda, J, Horn, M, Mares, M.
Deposit date:2012-11-16
Release date:2014-02-05
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Activation route of the Schistosoma mansoni cathepsin B1 drug target: structural map with a glycosaminoglycan switch
Structure, 22, 2014
6R4F
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BU of 6r4f by Molmil
Crystal structure of human GFAT-1 in complex with Glucose-6-Phosphate
Descriptor: GLUCOSE-6-PHOSPHATE, Glutamine--fructose-6-phosphate aminotransferase [isomerizing] 1
Authors:Ruegenberg, S, Horn, M, Pichlo, C, Allmeroth, K, Baumann, U, Denzel, M.S.
Deposit date:2019-03-22
Release date:2020-01-15
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.501 Å)
Cite:Loss of GFAT-1 feedback regulation activates the hexosamine pathway that modulates protein homeostasis.
Nat Commun, 11, 2020
6R4G
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BU of 6r4g by Molmil
Crystal structure of human GFAT-1 in complex with UDP-GlcNAc
Descriptor: GLUCOSE-6-PHOSPHATE, Glutamine--fructose-6-phosphate aminotransferase [isomerizing] 1, MAGNESIUM ION, ...
Authors:Ruegenberg, S, Horn, M, Pichlo, C, Allmeroth, K, Baumann, U, Denzel, M.S.
Deposit date:2019-03-22
Release date:2020-01-15
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.501 Å)
Cite:Loss of GFAT-1 feedback regulation activates the hexosamine pathway that modulates protein homeostasis.
Nat Commun, 11, 2020
3S3Q
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BU of 3s3q by Molmil
Structure of cathepsin B1 from Schistosoma mansoni in complex with K11017 inhibitor
Descriptor: ACETATE ION, Cathepsin B-like peptidase (C01 family), N~2~-(morpholin-4-ylcarbonyl)-N-[(3S)-1-phenyl-5-(phenylsulfonyl)pentan-3-yl]-L-leucinamide
Authors:Rezacova, P, Jilkova, A, Brynda, J, Horn, M, Mares, M.
Deposit date:2011-05-18
Release date:2011-08-10
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural Basis for Inhibition of Cathepsin B Drug Target from the Human Blood Fluke, Schistosoma mansoni.
J.Biol.Chem., 286, 2011
3S3R
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BU of 3s3r by Molmil
Structure of cathepsin B1 from Schistosoma mansoni in complex with K11777 inhibitor
Descriptor: Cathepsin B-like peptidase (C01 family), Nalpha-[(4-methylpiperazin-1-yl)carbonyl]-N-[(3S)-1-phenyl-5-(phenylsulfonyl)pentan-3-yl]-L-phenylalaninamide
Authors:Rezacova, P, Jilkova, A, Brynda, J, Horn, M, Mares, M.
Deposit date:2011-05-18
Release date:2011-08-10
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.64 Å)
Cite:Structural Basis for Inhibition of Cathepsin B Drug Target from the Human Blood Fluke, Schistosoma mansoni.
J.Biol.Chem., 286, 2011
3QSD
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BU of 3qsd by Molmil
Structure of cathepsin B1 from Schistosoma mansoni in complex with CA074 inhibitor
Descriptor: ACETATE ION, Cathepsin B-like peptidase (C01 family), DI(HYDROXYETHYL)ETHER, ...
Authors:Rezacova, P, Jilkova, A, Brynda, J, Horn, M, Mares, M.
Deposit date:2011-02-21
Release date:2011-08-10
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Structural Basis for Inhibition of Cathepsin B Drug Target from the Human Blood Fluke, Schistosoma mansoni.
J.Biol.Chem., 286, 2011
1MM6
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BU of 1mm6 by Molmil
crystal structure of the GluR2 ligand binding core (S1S2J) in complex with quisqualate in a non zinc crystal form at 2.15 angstroms resolution
Descriptor: (S)-2-AMINO-3-(3,5-DIOXO-[1,2,4]OXADIAZOLIDIN-2-YL)-PROPIONIC ACID, GLUTAMATE RECEPTOR 2, GLYCEROL, ...
Authors:Jin, R, Horning, M, Mayer, M.L, Gouaux, E.
Deposit date:2002-09-03
Release date:2003-02-04
Last modified:2017-08-23
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Mechanism of activation and selectivity in a ligand-gated ion channel: Structural and functional studies of GluR2 and quisqualate
Biochemistry, 41, 2002
3QDE
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BU of 3qde by Molmil
The structure of Cellobiose phosphorylase from Clostridium thermocellum in complex with phosphate
Descriptor: Cellobiose phosphorylase, PHOSPHATE ION, TRIS-HYDROXYMETHYL-METHYL-AMMONIUM
Authors:Bianchetti, C.M, Elsen, N.L, Horn, M.K, Fox, B.G, Phillips Jr, G.N.
Deposit date:2011-01-18
Release date:2011-11-09
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structure of cellobiose phosphorylase from Clostridium thermocellum in complex with phosphate.
Acta Crystallogr.,Sect.F, 67, 2011
1LBC
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BU of 1lbc by Molmil
Crystal structure of GluR2 ligand binding core (S1S2J-N775S) in complex with cyclothiazide (CTZ) as well as glutamate at 1.8 A resolution
Descriptor: CYCLOTHIAZIDE, GLUTAMIC ACID, Glutamine Receptor 2, ...
Authors:Sun, Y, Olson, R, Horning, M, Armstrong, N, Mayer, M, Gouaux, E.
Deposit date:2002-04-02
Release date:2002-05-29
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Mechanism of glutamate receptor desensitization.
Nature, 417, 2002
1MM7
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BU of 1mm7 by Molmil
Crystal Structure of the GluR2 Ligand Binding Core (S1S2J) in Complex with Quisqualate in a Zinc Crystal Form at 1.65 Angstroms Resolution
Descriptor: (S)-2-AMINO-3-(3,5-DIOXO-[1,2,4]OXADIAZOLIDIN-2-YL)-PROPIONIC ACID, GLUTAMATE RECEPTOR 2, ZINC ION
Authors:Jin, R, Horning, M, Mayer, M.L, Gouaux, E.
Deposit date:2002-09-03
Release date:2003-02-04
Last modified:2017-08-02
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Mechanism of Activation and Selectivity in a Ligand-Gated Ion Channel: Structural and Functional Studies of GluR2 and Quisqualate
Biochemistry, 41, 2003
1LB8
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BU of 1lb8 by Molmil
Crystal structure of the Non-desensitizing GluR2 ligand binding core mutant (S1S2J-L483Y) in complex with AMPA at 2.3 resolution
Descriptor: (S)-ALPHA-AMINO-3-HYDROXY-5-METHYL-4-ISOXAZOLEPROPIONIC ACID, Glutamate receptor 2
Authors:Sun, Y, Olson, R, Horning, M, Armstrong, N, Mayer, M, Gouaux, E.
Deposit date:2002-04-02
Release date:2002-06-05
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Mechanism of glutamate receptor desensitization.
Nature, 417, 2002
1LB9
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BU of 1lb9 by Molmil
Crystal structure of the Non-desensitizing GluR2 ligand binding core mutant (S1S2J-L483Y) in complex with antagonist DNQX at 2.3 A resolution
Descriptor: 6,7-DINITROQUINOXALINE-2,3-DIONE, Glutamate receptor 2, SULFATE ION
Authors:Sun, Y, Olson, R, Horning, M, Armstrong, N, Mayer, M, Gouaux, E.
Deposit date:2002-04-02
Release date:2002-06-05
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Mechanism of glutamate receptor desensitization.
Nature, 417, 2002
1LBB
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BU of 1lbb by Molmil
Crystal structure of the GluR2 ligand binding domain mutant (S1S2J-N754D) in complex with kainate at 2.1 A resolution
Descriptor: 3-(CARBOXYMETHYL)-4-ISOPROPENYLPROLINE, Glutamine receptor 2
Authors:Sun, Y, Olson, R, Horning, M, Armstrong, N, Mayer, M, Gouaux, E.
Deposit date:2002-04-02
Release date:2002-06-05
Last modified:2021-10-27
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Mechanism of glutamate receptor desensitization.
Nature, 417, 2002
5A5Y
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BU of 5a5y by Molmil
Crystal structure of AtTTM3 in complex with tripolyphosphate and magnesium ion (form A)
Descriptor: 1,2-ETHANEDIOL, MAGNESIUM ION, TRIPHOSPHATE, ...
Authors:Martinez, J, Truffault, V, Hothorn, M.
Deposit date:2015-06-23
Release date:2015-08-05
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.92 Å)
Cite:Structural Determinants for Substrate Binding and Catalysis in Triphosphate Tunnel Metalloenzymes.
J.Biol.Chem., 290, 2015
5A67
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BU of 5a67 by Molmil
Crystal structure of AtTTM3 in complex with tripolyphosphate and manganese ion (form B)
Descriptor: MANGANESE (II) ION, TRIPHOSPHATE, TRIPHOSPHATE TUNEL METALLOENZYME 3
Authors:Martinez, J, Truffault, V, Hothorn, M.
Deposit date:2015-06-24
Release date:2015-08-05
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Structural Determinants for Substrate Binding and Catalysis in Triphosphate Tunnel Metalloenzymes.
J.Biol.Chem., 290, 2015
5IIG
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BU of 5iig by Molmil
Structure of the SPX-TTM domain fragment of the yeast inorganic polyphophate polymerase Vtc4 (form A).
Descriptor: SULFATE ION, Vacuolar transporter chaperone 4
Authors:Wild, R, Hothorn, M.
Deposit date:2016-03-01
Release date:2016-04-27
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.99 Å)
Cite:Control of eukaryotic phosphate homeostasis by inositol polyphosphate sensor domains.
Science, 352, 2016
2FXK
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BU of 2fxk by Molmil
Crystal structure of the macro-domain of human core histone variant macroH2A1.1 (form A)
Descriptor: H2A histone family, member Y isoform 1
Authors:Kustatscher, G, Hothorn, M, Pugieux, C, Scheffzek, K, Ladurner, A.G.
Deposit date:2006-02-06
Release date:2006-02-14
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.54 Å)
Cite:Splicing regulates NAD metabolite binding to histone macroH2A.
Nat.Struct.Mol.Biol., 12, 2005
8CWP
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BU of 8cwp by Molmil
X-ray crystal structure of NTHi Protein D bound to a putative glycerol moiety
Descriptor: GLYCEROL, Glycerophosphoryl diester phosphodiesterase, SODIUM ION
Authors:Jones, S.P, Cook, K.H, Holmquist, M.L, Almekinder, L, DeLaney, A, Labbe, N, Perdue, J, Jackson, N, Charles, R, Pichichero, M, Kaur, R, Michel, L, Gleghorn, M.L.
Deposit date:2022-05-19
Release date:2022-09-28
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Vaccine target and carrier molecule nontypeable Haemophilus influenzae protein D dimerizes like the close Escherichia coli GlpQ homolog but unlike other known homolog dimers.
Proteins, 91, 2023
5IYX
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BU of 5iyx by Molmil
Crystal structure of the Arabidopsis receptor kinase HAESA in complex with the peptide hormone IDA and the co-receptor SERK1
Descriptor: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Santiago, J, Hothorn, M.
Deposit date:2016-03-24
Release date:2016-04-20
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.43 Å)
Cite:Mechanistic insight into a peptide hormone signaling complex mediating floral organ abscission.
Elife, 5, 2016
5IXQ
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BU of 5ixq by Molmil
Crystal structure of the Arabidopsis receptor kinase HAESA LRR ectdomain in complex with the peptide hormone IDA.
Descriptor: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Santiago, J, Hothorn, M.
Deposit date:2016-03-23
Release date:2016-04-20
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.86 Å)
Cite:Mechanistic insight into a peptide hormone signaling complex mediating floral organ abscission.
Elife, 5, 2016
5IXT
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BU of 5ixt by Molmil
The crystal structure of the Arabidopsis receptor kinase HAESA LRR ectdomain in complex with a N-terminal extended IDA peptide hormone ligand.
Descriptor: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Santiago, J, Hothorn, M.
Deposit date:2016-03-23
Release date:2016-04-20
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.94 Å)
Cite:Mechanistic insight into a peptide hormone signaling complex mediating floral organ abscission.
Elife, 5, 2016
5IYV
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BU of 5iyv by Molmil
Crystal structure of the Arabidopsis receptor kinase HAESA LRR ectdomain in complex with the peptide hormone IDL1.
Descriptor: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Santiago, J, Hothorn, M.
Deposit date:2016-03-24
Release date:2016-04-20
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.56 Å)
Cite:Mechanistic insight into a peptide hormone signaling complex mediating floral organ abscission.
Elife, 5, 2016
5IXO
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BU of 5ixo by Molmil
Crystal structure of the Arabidopsis receptor kinase HAESA LRR ectdomain (apo form).
Descriptor: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Santiago, J, Hothorn, M.
Deposit date:2016-03-23
Release date:2016-04-20
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (1.74 Å)
Cite:Mechanistic insight into a peptide hormone signaling complex mediating floral organ abscission.
Elife, 5, 2016
6HXG
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BU of 6hxg by Molmil
PDX1.2/PDX1.3 complex (intermediate)
Descriptor: Pyridoxal 5'-phosphate synthase subunit PDX1.3, Pyridoxal 5'-phosphate synthase-like subunit PDX1.2, SULFATE ION
Authors:Robinson, G.C, Kaufmann, M, Roux, C, Martinez-Font, J, Hothorn, M, Thore, S, Fitzpatrick, T.B.
Deposit date:2018-10-17
Release date:2019-04-17
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structure of the pseudoenzyme PDX1.2 in complex with its cognate enzyme PDX1.3: a total eclipse.
Acta Crystallogr D Struct Biol, 75, 2019

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