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PDB: 55 results

7D39
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BU of 7d39 by Molmil
FLR-apo
Descriptor: Cd1, FLAVIN MONONUCLEOTIDE
Authors:Hong, S, Yang, G.H, Zhang, P.
Deposit date:2020-09-18
Release date:2021-03-03
Method:X-RAY DIFFRACTION (2.198 Å)
Cite:Discovery of an ene-reductase for initiating flavone and flavonol catabolism in gut bacteria.
Nat Commun, 12, 2021
7D38
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BU of 7d38 by Molmil
flavone reductase
Descriptor: Cd1, FLAVIN MONONUCLEOTIDE, chrysin
Authors:Hong, S, Yang, G.H, Zhang, P.
Deposit date:2020-09-18
Release date:2021-03-03
Method:X-RAY DIFFRACTION (2.649 Å)
Cite:Discovery of an ene-reductase for initiating flavone and flavonol catabolism in gut bacteria.
Nat Commun, 12, 2021
7D3B
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BU of 7d3b by Molmil
flavone reductase
Descriptor: 2-(3,4-dihydroxyphenyl)-5,7-dihydroxy-4H-chromen-4-one, Cd1, FLAVIN MONONUCLEOTIDE
Authors:Hong, S, Yang, G.H, Zhang, P.
Deposit date:2020-09-18
Release date:2021-03-03
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Discovery of an ene-reductase for initiating flavone and flavonol catabolism in gut bacteria.
Nat Commun, 12, 2021
7D3A
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BU of 7d3a by Molmil
flavone reductase
Descriptor: 5,7-dihydroxy-2-(4-hydroxyphenyl)-4H-chromen-4-one, Cd1, FLAVIN MONONUCLEOTIDE
Authors:Hong, S, Yang, G.H, Zhang, P.
Deposit date:2020-09-18
Release date:2021-03-03
Last modified:2021-09-29
Method:X-RAY DIFFRACTION (2.552 Å)
Cite:Discovery of an ene-reductase for initiating flavone and flavonol catabolism in gut bacteria.
Nat Commun, 12, 2021
5VPP
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BU of 5vpp by Molmil
The 70S P-site tRNA SufA6 complex
Descriptor: 16S rRNA, 23S rRNA, 30S ribosomal protein S10, ...
Authors:Hong, S, Sunita, S, Dunkle, J.A, Maehigashi, T, Dunham, C.M.
Deposit date:2017-05-05
Release date:2018-09-26
Last modified:2018-11-07
Method:X-RAY DIFFRACTION (3.9 Å)
Cite:Mechanism of tRNA-mediated +1 ribosomal frameshifting.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
5VPO
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BU of 5vpo by Molmil
The 70S P-site ASL SufA6 complex
Descriptor: 16S rRNA, 23S rRNA, 30S ribosomal protein S10, ...
Authors:Hong, S, Sunita, S, Dunkle, J.A, Maehigashi, T, Dunham, C.M.
Deposit date:2017-05-05
Release date:2018-09-26
Last modified:2018-11-07
Method:X-RAY DIFFRACTION (3.34 Å)
Cite:Mechanism of tRNA-mediated +1 ribosomal frameshifting.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
5T01
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BU of 5t01 by Molmil
Human c-Jun DNA binding domain homodimer in complex with methylated DNA
Descriptor: DNA (5'-D(*AP*AP*TP*GP*GP*AP*(5CM)P*GP*AP*GP*TP*CP*AP*TP*AP*GP*GP*AP*G)-3'), DNA (5'-D(P*CP*TP*CP*CP*TP*AP*TP*GP*AP*CP*TP*CP*GP*TP*CP*CP*AP*T)-3'), Transcription factor AP-1
Authors:Hong, S, Horton, J.R, Cheng, X.
Deposit date:2016-08-15
Release date:2017-03-01
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.89 Å)
Cite:Methyl-dependent and spatial-specific DNA recognition by the orthologous transcription factors human AP-1 and Epstein-Barr virus Zta.
Nucleic Acids Res., 45, 2017
5SZX
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BU of 5szx by Molmil
Epstein-Barr virus Zta DNA binding domain homodimer in complex with methylated DNA
Descriptor: DNA (5'-D(*AP*AP*GP*CP*AP*CP*TP*GP*AP*GP*(5CM)P*GP*AP*TP*GP*AP*AP*G)-3'), DNA (5'-D(*TP*CP*TP*TP*CP*AP*TP*(5CM)P*GP*CP*TP*CP*AP*GP*TP*GP*CP*T)-3'), PHOSPHATE ION, ...
Authors:Hong, S, Horton, J.R, Cheng, X.
Deposit date:2016-08-15
Release date:2017-03-01
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.251 Å)
Cite:Methyl-dependent and spatial-specific DNA recognition by the orthologous transcription factors human AP-1 and Epstein-Barr virus Zta.
Nucleic Acids Res., 45, 2017
7ERQ
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BU of 7erq by Molmil
The regulatory domain of YeiE, a sulfite sensing LysR-type transcriptional regulator from Cronobacter sakazakii (ligand-free form)
Descriptor: LysR family transcriptional regulator
Authors:Hong, S, Ha, N.-C.
Deposit date:2021-05-06
Release date:2022-03-23
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Crystal structures of YeiE from Cronobacter sakazakii and the role of sulfite tolerance in gram-negative bacteria.
Proc.Natl.Acad.Sci.USA, 119, 2022
7ERP
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BU of 7erp by Molmil
The regulatory domain of YeiE, a sulfite sensing LysR-type transcriptional regulator from Cronobacter sakazakii (sulfite-bound form)
Descriptor: LysR family transcriptional regulator, SULFITE ION
Authors:Hong, S, Ha, N.-C.
Deposit date:2021-05-06
Release date:2022-03-23
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.03 Å)
Cite:Crystal structures of YeiE from Cronobacter sakazakii and the role of sulfite tolerance in gram-negative bacteria.
Proc.Natl.Acad.Sci.USA, 119, 2022
7FDF
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BU of 7fdf by Molmil
The E145S mutant of the regulatory domain of YeiE, a sulfite sensing LysR-type transcriptional regulator from Cronobacter sakazakii (sulfate-bound form)
Descriptor: LysR family transcriptional regulator, SULFATE ION
Authors:Hong, S, Ha, N.-C.
Deposit date:2021-07-16
Release date:2022-03-23
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Crystal structures of YeiE from Cronobacter sakazakii and the role of sulfite tolerance in gram-negative bacteria.
Proc.Natl.Acad.Sci.USA, 119, 2022
7E1H
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BU of 7e1h by Molmil
crystal structure of RD-BEF
Descriptor: BERYLLIUM TRIFLUORIDE ION, DNA-binding response regulator, MAGNESIUM ION
Authors:Hong, S, Zhang, X, Zhang, P.
Deposit date:2021-02-01
Release date:2022-02-09
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.805 Å)
Cite:Structural basis of phosphorylation-induced activation of the response regulator VbrR.
Acta Biochim.Biophys.Sin., 2023
7E1F
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BU of 7e1f by Molmil
Native-DBD
Descriptor: DNA-binding response regulator
Authors:Hong, S, Zhang, P.
Deposit date:2021-02-01
Release date:2022-02-09
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.447 Å)
Cite:Structural basis of phosphorylation-induced activation of the response regulator VbrR.
Acta Biochim.Biophys.Sin., 2023
7E1D
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BU of 7e1d by Molmil
Se-DBD
Descriptor: DNA-binding response regulator
Authors:Hong, S, Zhang, P.
Deposit date:2021-02-01
Release date:2022-02-09
Last modified:2023-02-22
Method:X-RAY DIFFRACTION (2.002 Å)
Cite:Structural basis of phosphorylation-induced activation of the response regulator VbrR.
Acta Biochim.Biophys.Sin., 2023
7E1B
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BU of 7e1b by Molmil
Crystal structure of VbrR-DNA complex
Descriptor: DNA (26-MER), DNA-binding response regulator
Authors:Hong, S, Zhang, X, Zhang, P.
Deposit date:2021-02-01
Release date:2022-02-09
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (4.587 Å)
Cite:Structural basis of phosphorylation-induced activation of the response regulator VbrR.
Acta Biochim.Biophys.Sin., 2023
5YHR
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BU of 5yhr by Molmil
Crystal structure of the anti-CRISPR protein, AcrF2
Descriptor: Anti-CRISPR protein 30, CALCIUM ION
Authors:Hong, S, Ka, D, Bae, E.
Deposit date:2017-09-29
Release date:2018-02-07
Last modified:2019-02-20
Method:X-RAY DIFFRACTION (1.34 Å)
Cite:CRISPR RNA and anti-CRISPR protein binding to theXanthomonas albilineansCsy1-Csy2 heterodimer in the type I-F CRISPR-Cas system
J. Biol. Chem., 293, 2018
6K25
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BU of 6k25 by Molmil
Crystal structure of Ca-unbound human Annexin A5 in low salt condition
Descriptor: Annexin A5
Authors:Hong, S, Ha, N.-C.
Deposit date:2019-05-13
Release date:2020-03-25
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.401 Å)
Cite:High-resolution structures of annexin A5 in a two-dimensional array.
J.Struct.Biol., 209, 2020
6K22
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BU of 6k22 by Molmil
Crystal structure of Ca-bound human Annexin A5 in low salt condition
Descriptor: Annexin A5, CALCIUM ION
Authors:Hong, S, Ha, N.-C.
Deposit date:2019-05-13
Release date:2020-03-25
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.747 Å)
Cite:High-resolution structures of annexin A5 in a two-dimensional array.
J.Struct.Biol., 209, 2020
6AKV
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BU of 6akv by Molmil
Crystal structure of LysB4, the endolysin from Bacillus cereus-targeting bacteriophage B4
Descriptor: CHLORIDE ION, LysB4, SULFATE ION, ...
Authors:Hong, S, Ha, N.-C.
Deposit date:2018-09-03
Release date:2019-02-13
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal Structure of LysB4, an Endolysin fromBacillus cereus-Targeting Bacteriophage B4.
Mol. Cells, 42, 2019
4ZFH
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BU of 4zfh by Molmil
Crystal structure of Artificial ankyrin repeat protein_Ank(GAG)1D4 mutant -Y56A
Descriptor: Artificial ankyrin repeat protein_Ank(GAG)1D4 mutant -Y56A, MAGNESIUM ION
Authors:Chuankhayan, P, Saoin, S, Chupradit, K, Wisitponchai, T, Intachai, K, Kitidee, K, Nangola, S, Sanghiran, L.V, Hong, S.S, Boulanger, P, Tayapiwatana, C, Chen, C.J.
Deposit date:2015-04-21
Release date:2016-04-20
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.89 Å)
Cite:Crystal structure of Artificial ankyrin repeat protein_Ank(GAG)1D4 mutant- Y56A
To Be Published
5GIK
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BU of 5gik by Molmil
Modulation of the affinity of a HIV-1 capsid-directed ankyrin towards its viral target through critical amino acid editing
Descriptor: Artificial ankyrin repeat protein_Ank(GAG)1D4 mutant -S45Y, GLYCEROL
Authors:Chuankhayan, P, Saoin, S, Wisitponchai, T, Intachai, K, Chupradit, K, Moonmuang, S, Kitidee, K, Nangola, S, Sanghiran, L.V, Hong, S.S, Boulanger, P, Tayapiwatana, C, Chen, C.J.
Deposit date:2016-06-24
Release date:2017-06-28
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.49 Å)
Cite:Modulation of the affinity of a HIV-1 capsid-directed ankyrintowards its viral target through critical amino acid editing
To Be Published
6LAC
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BU of 6lac by Molmil
The structural basis of the beta-carbonic anhydrase CafD (C39A mutant) of the filamentous fungus Aspergillus fumigatus
Descriptor: Carbonic anhydrase, ZINC ION
Authors:Jiin, M.S, Kim, S, Kim, N.J, Hong, S, Kim, S, Sung, J.
Deposit date:2019-11-12
Release date:2019-11-27
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:The structural analysis of non-catalytic zinc binding site in the minor beta-carbonic anhydrase CafD
To be published
7DNZ
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BU of 7dnz by Molmil
Cryo-EM structure of the human ABCB6 (Hemin and GSH-bound)
Descriptor: ATP-binding cassette sub-family B member 6, mitochondrial, CHOLESTEROL HEMISUCCINATE, ...
Authors:Kim, S, Lee, S.S, Park, J.G, Kim, J.W, Kim, S, Kim, N.J, Hong, S, Kang, J.Y, Jin, M.S.
Deposit date:2020-12-11
Release date:2022-06-22
Last modified:2024-06-05
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:Structural Insights into Porphyrin Recognition by the Human ATP-Binding Cassette Transporter ABCB6.
Mol.Cells, 45, 2022
7DNY
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BU of 7dny by Molmil
Cryo-EM structure of the human ABCB6 (coproporphyrin III-bound)
Descriptor: ATP-binding cassette sub-family B member 6, mitochondrial, CHOLESTEROL HEMISUCCINATE, ...
Authors:Kim, S, Lee, S.S, Park, J.G, Kim, J.W, Kim, S, Kim, N.J, Hong, S, Kang, J.Y, Jin, M.S.
Deposit date:2020-12-11
Release date:2022-06-22
Last modified:2024-06-05
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Structural Insights into Porphyrin Recognition by the Human ATP-Binding Cassette Transporter ABCB6.
Mol.Cells, 45, 2022
4HLL
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BU of 4hll by Molmil
Crystal structure of Artificial ankyrin repeat protein_Ank(GAG)1D4
Descriptor: Ankyrin(GAG)1D4
Authors:Chuankhayan, P, Nangola, S, Minard, P, Boulanger, P, Hong, S.S, Tayapiwatana, C, Chen, C.-J.
Deposit date:2012-10-17
Release date:2013-10-23
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Identification of Gag bioactive determinants specific to designed ankyrin and interfering in HIV-1 assembly
To be Published

 

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数据于2024-07-17公开中

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