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PDB: 178 results

1JFX
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Crystal structure of the bacterial lysozyme from Streptomyces coelicolor at 1.65 A resolution
Descriptor: 1,4-beta-N-Acetylmuramidase M1, CHLORIDE ION
Authors:Rau, A, Hogg, T, Marquardt, R, Hilgenfeld, R.
Deposit date:2001-06-22
Release date:2001-09-05
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:A new lysozyme fold. Crystal structure of the muramidase from Streptomyces coelicolor at 1.65 A resolution.
J.Biol.Chem., 276, 2001
2JBK
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membrane-bound glutamate carboxypeptidase II (GCPII) in complex with quisqualic acid (quisqualate, alpha-amino-3,5-dioxo-1,2,4- oxadiazolidine-2-propanoic acid)
Descriptor: (S)-2-AMINO-3-(3,5-DIOXO-[1,2,4]OXADIAZOLIDIN-2-YL)-PROPIONIC ACID, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Mesters, J.R, Henning, K, Hilgenfeld, R.
Deposit date:2006-12-07
Release date:2006-12-18
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.99 Å)
Cite:Human Glutamate Carboxypeptidase II Inhibition: Structures of Gcpii in Complex with Two Potent Inhibitors, Quisqualate and 2-Pmpa.
Acta Crystallogr.,Sect.D, 63, 2007
2JBJ
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membrane-bound glutamate carboxypeptidase II (GCPII) in complex with 2-PMPA (2-phosphonoMethyl-pentanedioic acid)
Descriptor: (2S)-2-(PHOSPHONOMETHYL)PENTANEDIOIC ACID, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Mesters, J.R, Henning, K, Hilgenfeld, R.
Deposit date:2006-12-07
Release date:2006-12-18
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.19 Å)
Cite:Human Glutamate Carboxypeptidase II Inhibition: Structures of Gcpii in Complex with Two Potent Inhibitors, Quisqualate and 2-Pmpa.
Acta Crystallogr.,Sect.D, 63, 2007
5NFS
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Structure of coxsackievirus B3 3C protease in complex with the alpha-ketoamide (S)-N-benzyl-3-((S)-2-cinnamamido-3-phenylpropanamido)-2-oxo-4-((S)-2-oxopyrrolidin-3-yl)butanamide (cinnamoyl-phenylalanine-GlnLactam-CO-CO-NH-benzyl)
Descriptor: (S)-N-benzyl-3-((S)-2-cinnamamido-3-phenylpropanamido)-2-oxo-4-((S)-2-oxopyrrolidin-3-yl)butanamide, Genome polyprotein
Authors:Ma, Q, Zhang, L, Hilgenfeld, R.
Deposit date:2017-03-15
Release date:2018-05-16
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Alpha-ketoamides as broad-spectrum inhibitors of coronavirus and enterovirus replication
To Be Published
5NGN
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Lybatide 2, a cystine-rich peptide from Lycium barbarum
Descriptor: ACETONITRILE, GLYCEROL, TETRAETHYLENE GLYCOL, ...
Authors:Lei, J, Tan, W.L, Sakai, N, Hilgenfeld, R.
Deposit date:2017-03-18
Release date:2017-07-26
Last modified:2018-04-11
Method:X-RAY DIFFRACTION (1.48 Å)
Cite:Lybatides from Lycium barbarum Contain An Unusual Cystine-stapled Helical Peptide Scaffold.
Sci Rep, 7, 2017
2VB0
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BU of 2vb0 by Molmil
Crystal structure of coxsackievirus B3 proteinase 3C
Descriptor: CHLORIDE ION, POLYPROTEIN 3BCD
Authors:Anand, K, Mesters, J.R, Goerlach, R, Zell, R, Hilgenfeld, R.
Deposit date:2007-09-05
Release date:2008-10-28
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal Structure of Coxsackie Virus B3 Proteinase 3C
To be Published
1F13
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RECOMBINANT HUMAN CELLULAR COAGULATION FACTOR XIII
Descriptor: CELLULAR COAGULATION FACTOR XIII ZYMOGEN
Authors:Weiss, M.S, Hilgenfeld, R.
Deposit date:1998-01-16
Release date:1998-08-12
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Two non-proline cis peptide bonds may be important for factor XIII function.
FEBS Lett., 423, 1998
2XCI
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Membrane-embedded monofunctional glycosyltransferase WaaA of Aquifex aeolicus, substrate-free form
Descriptor: 3-DEOXY-D-MANNO-2-OCTULOSONIC ACID TRANSFERASE, BETA-MERCAPTOETHANOL, CHLORIDE ION, ...
Authors:Schmidt, H, Hansen, G, Hilgenfeld, R, Mamat, U, Mesters, J.R.
Deposit date:2010-04-26
Release date:2011-05-11
Last modified:2019-05-15
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural and Mechanistic Analysis of the Membrane-Embedded Glycosyltransferase Waaa Required for Lipopolysaccharide Synthesis.
Proc.Natl.Acad.Sci.USA, 109, 2012
4D4Z
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STRUCTURE OF HUMAN DEOXYHYPUSINE HYDROXYLASE in complex with glycerol
Descriptor: 2-[3-(2-HYDROXY-1,1-DIHYDROXYMETHYL-ETHYLAMINO)-PROPYLAMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, DEOXYHYPUSINE HYDROXYLASE, FE (III) ION, ...
Authors:Han, Z, Sakai, N, Hilgenfeld, R.
Deposit date:2014-10-31
Release date:2015-04-15
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystal Structure of the Peroxo-Diiron(III) Intermediate of Deoxyhypusine Hydroxylase, an Oxygenase Involved in Hypusination.
Structure, 23, 2015
8C9L
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Crystal structure of SARS-CoV-2 Mpro-S144A mutant, free enzyme
Descriptor: 3C-like proteinase nsp5
Authors:El Kilani, H, Ibrahim, M, Hilgenfeld, R.
Deposit date:2023-01-23
Release date:2024-02-07
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystal structure of SARS-CoV-2 Mpro-S144A mutant, free enzyme
To Be Published
8C9O
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Crystal structure of SARS-CoV-2 Mpro-S144A mutant in complex with 13b-K
Descriptor: 3C-like proteinase nsp5, ~{tert}-butyl ~{N}-[1-[(2~{S})-3-cyclopropyl-1-oxidanylidene-1-[[(2~{S},3~{R})-3-oxidanyl-4-oxidanylidene-1-[(3~{S})-2-oxidanylidenepyrrolidin-3-yl]-4-[(phenylmethyl)amino]butan-2-yl]amino]propan-2-yl]-2-oxidanylidene-pyridin-3-yl]carbamate
Authors:Ibrahim, M, El Kilani, H, Hilgenfeld, R.
Deposit date:2023-01-23
Release date:2024-02-07
Method:X-RAY DIFFRACTION (1.69 Å)
Cite:Crystal structure of SARS-CoV-2 Mpro_S144A mutant in complex with 13b-K
To Be Published
8C9P
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Crystal structure of SARS-CoV-2 Mpro-E166V mutant, free enzyme
Descriptor: 3C-like proteinase nsp5
Authors:El Kilani, H, Ibrahim, M, Hilgenfeld, R.
Deposit date:2023-01-23
Release date:2024-08-07
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of SARS-CoV-2 Mpro-A166V mutant, free enzyme
To Be Published
8C9U
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Crystal structure of SARS-CoV-2 Mpro-Q189K mutant in complex with nirmatrelvir
Descriptor: (1R,2S,5S)-N-{(1E,2S)-1-imino-3-[(3S)-2-oxopyrrolidin-3-yl]propan-2-yl}-6,6-dimethyl-3-[3-methyl-N-(trifluoroacetyl)-L-valyl]-3-azabicyclo[3.1.0]hexane-2-carboxamide, Non-structural protein 11
Authors:El Kilani, H, Hilgenfeld, R.
Deposit date:2023-01-23
Release date:2024-08-07
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Crystal structure of SARS-CoV-2 Mpro-Q189K mutant in complex with nirmatrelvir
To Be Published
8C9Q
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Crystal structure of SARS-CoV-2 Mpro-Q189K mutant in complex with 13b-K
Descriptor: Non-structural protein 11, ~{tert}-butyl ~{N}-[1-[(2~{S})-3-cyclopropyl-1-oxidanylidene-1-[[(2~{S},3~{R})-3-oxidanyl-4-oxidanylidene-1-[(3~{S})-2-oxidanylidenepyrrolidin-3-yl]-4-[(phenylmethyl)amino]butan-2-yl]amino]propan-2-yl]-2-oxidanylidene-pyridin-3-yl]carbamate
Authors:El Kilani, H, Hilgenfeld, R.
Deposit date:2023-01-23
Release date:2024-08-07
Method:X-RAY DIFFRACTION (1.86 Å)
Cite:Crystal structure of SARS-CoV-2 Mpro-Q189K mutant in complex with 13b-K
To Be Published
8CA8
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Crystal structure of SARS-CoV-2 Mpro-H172Y mutant, free enzyme
Descriptor: 3C-like proteinase nsp5, CHLORIDE ION
Authors:El Kilani, H, Ibrahim, M, Hilgenfeld, R.
Deposit date:2023-01-24
Release date:2024-08-07
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of SARS-CoV-2 Mpro-H172Y mutant, free enzyme
To Be Published
8CAC
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Crystal structure of SARS-CoV-2 Mpro-H172Y mutant in complex with 13b-K
Descriptor: 3C-like proteinase nsp5, CHLORIDE ION, ~{tert}-butyl ~{N}-[1-[(2~{S})-3-cyclopropyl-1-oxidanylidene-1-[[(2~{S},3~{R})-3-oxidanyl-4-oxidanylidene-1-[(3~{S})-2-oxidanylidenepyrrolidin-3-yl]-4-[(phenylmethyl)amino]butan-2-yl]amino]propan-2-yl]-2-oxidanylidene-pyridin-3-yl]carbamate
Authors:Ibrahim, M, El Kilani, H, Hilgenfeld, R.
Deposit date:2023-01-24
Release date:2024-08-07
Method:X-RAY DIFFRACTION (2.13 Å)
Cite:Crystal structure of SARS-CoV-2 Mpro-H172Y mutant in complex with 13b-K
To Be Published
8CA6
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Crystal structure of SARS-CoV-2 Mpro-Q189K mutant, free enzyme
Descriptor: Non-structural protein 11
Authors:El Kilani, H, Hilgenfeld, R.
Deposit date:2023-01-24
Release date:2024-08-07
Method:X-RAY DIFFRACTION (1.92 Å)
Cite:Crystal structure of SARS-CoV-2 Mpro-Q189K mutant, free enzyme
To Be Published
8CAJ
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Crystal structure of SARS-CoV-2 Mpro-E166V mutant in complex with 13b-K
Descriptor: Non-structural protein 11, ~{tert}-butyl ~{N}-[1-[(2~{S})-3-cyclopropyl-1-oxidanylidene-1-[[(2~{S},3~{S})-3-oxidanyl-4-oxidanylidene-1-[(3~{R})-2-oxidanylidenepyrrolidin-3-yl]-4-[(phenylmethyl)amino]butan-2-yl]amino]propan-2-yl]-2-oxidanylidene-pyridin-3-yl]carbamate
Authors:El Kilani, H, Hilgenfeld, R.
Deposit date:2023-01-24
Release date:2024-08-07
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structure of SARS-CoV-2 Mpro-E166V mutant in complex with 13b-K
To Be Published
2VRI
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BU of 2vri by Molmil
Structure of the NSP3 X-domain of human coronavirus NL63
Descriptor: 1,2-ETHANEDIOL, NON-STRUCTURAL PROTEIN 3
Authors:Piotrowski, Y, Mesters, J.R, Moll, R, Hilgenfeld, R.
Deposit date:2008-04-08
Release date:2009-06-09
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structure of the Nsp3 X-Domain of Human Coronavirus Nl63
To be Published
4D50
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BU of 4d50 by Molmil
Structure of human deoxyhypusine hydroxylase
Descriptor: DEOXYHYPUSINE HYDROXYLASE, FE (III) ION, GUANIDINE, ...
Authors:Han, Z, Sakai, N, Hilgenfeld, R.
Deposit date:2014-10-31
Release date:2015-04-15
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystal Structure of the Peroxo-Diiron(III) Intermediate of Deoxyhypusine Hydroxylase, an Oxygenase Involved in Hypusination.
Structure, 23, 2015
3P39
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Crystal structure of the NS1 effector domain W182A mutant from influenza A/Vietnam/1203/2004 (H5N1) virus
Descriptor: Nonstructural protein 1
Authors:Chen, S, Xiao, Y.B, Bricogne, G, Sharff, A.J, Hilgenfeld, R.
Deposit date:2010-10-04
Release date:2011-10-05
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (3.14 Å)
Cite:X-ray structures of the NS1 effector domain from highly pathogenic influenza A/Vietnam/1203/2004 (H5N1) virus
To be Published
3P38
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Crystal structure of the NS1 effector domain W182A mutant from influenza A/Vietnam/1203/2004 (H5N1) virus
Descriptor: Nonstructural protein 1
Authors:Chen, S, Xiao, Y.B, Bricogne, G, Sharff, A.J, Hilgenfeld, R.
Deposit date:2010-10-04
Release date:2011-10-05
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.76 Å)
Cite:X-ray structures of the NS1 effector domain from highly pathogenic influenza A/Vietnam/1203/2004 (H5N1) virus
To be Published
2Y6P
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Evidence for a Two-Metal-Ion-Mechanism in the Kdo- Cytidylyltransferase KdsB
Descriptor: 3-DEOXY-MANNO-OCTULOSONATE CYTIDYLYLTRANSFERASE, BETA-MERCAPTOETHANOL, CYTIDINE-5'-TRIPHOSPHATE, ...
Authors:Schmidt, H, Mesters, J.R, Mamat, U, Hilgenfeld, R.
Deposit date:2011-01-25
Release date:2011-08-24
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Evidence for a Two-Metal-Ion Mechanism in the Cytidyltransferase Kdsb, an Enzyme Involved in Lipopolysaccharide Biosynthesis.
Plos One, 6, 2011
7AGA
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BU of 7aga by Molmil
Structure of SARS-CoV-2 Main Protease bound to AT7519
Descriptor: 3C-like proteinase, 4-{[(2,6-dichlorophenyl)carbonyl]amino}-N-piperidin-4-yl-1H-pyrazole-3-carboxamide, CHLORIDE ION, ...
Authors:Guenther, S, Reinke, P, Oberthuer, D, Yefanov, O, Gelisio, L, Ginn, H, Lieske, J, Domaracky, M, Brehm, W, Rahmani Mashour, A, White, T.A, Knoska, J, Pena Esperanza, G, Koua, F, Tolstikova, A, Groessler, M, Fischer, P, Hennicke, V, Fleckenstein, H, Trost, F, Galchenkova, M, Gevorkov, Y, Li, C, Awel, S, Paulraj, L.X, Ullah, N, Andaleeb, H, Werner, N, Falke, S, Hinrichs, W, Alves Franca, B, Schwinzer, M, Brognaro, H, Perbandt, M, Tidow, H, Seychell, B, Beck, T, Meier, S, Doyle, J.J, Giseler, H, Melo, D, Dunkel, I, Lane, T.J, Peck, A, Saouane, S, Hakanpaeae, J, Meyer, J, Noei, H, Boger, J, Gribbon, P, Ellinger, B, Kuzikov, M, Wolf, M, Zhang, L, Ehrt, C, Pletzer-Zelgert, J, Wollenhaupt, J, Feiler, C, Weiss, M, Schulz, E.C, Mehrabi, P, Norton-Baker, B, Schmidt, C, Lorenzen, K, Schubert, R, Han, H, Chari, A, Fernandez Garcia, Y, Turk, D, Hilgenfeld, R, Rarey, M, Zaliani, A, Chapman, H.N, Pearson, A, Betzel, C, Meents, A.
Deposit date:2020-09-22
Release date:2020-12-02
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.68 Å)
Cite:X-ray screening identifies active site and allosteric inhibitors of SARS-CoV-2 main protease.
Science, 372, 2021
7AHA
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BU of 7aha by Molmil
Structure of SARS-CoV-2 Main Protease bound to Maleate.
Descriptor: 3C-like proteinase, CHLORIDE ION, DIMETHYL SULFOXIDE, ...
Authors:Guenther, S, Reinke, P, Oberthuer, D, Yefanov, O, Gelisio, L, Ginn, H, Lieske, J, Domaracky, M, Brehm, W, Rahmani Mashour, A, White, T.A, Knoska, J, Pena Esperanza, G, Koua, F, Tolstikova, A, Groessler, M, Fischer, P, Hennicke, V, Fleckenstein, H, Trost, F, Galchenkova, M, Gevorkov, Y, Li, C, Awel, S, Paulraj, L.X, Ullah, N, Andaleeb, H, Werner, N, Falke, S, Hinrichs, W, Alves Franca, B, Schwinzer, M, Brognaro, H, Perbandt, M, Tidow, H, Seychell, B, Beck, T, Meier, S, Doyle, J.J, Giseler, H, Melo, D, Dunkel, I, Lane, T.J, Peck, A, Saouane, S, Hakanpaeae, J, Meyer, J, Noei, H, Boger, J, Gribbon, P, Ellinger, B, Kuzikov, M, Wolf, M, Zhang, L, Ehrt, C, Pletzer-Zelgert, J, Wollenhaupt, J, Feiler, C, Weiss, M, Schulz, E.C, Mehrabi, P, Norton-Baker, B, Schmidt, C, Lorenzen, K, Schubert, R, Han, H, Chari, A, Fernandez Garcia, Y, Turk, D, Hilgenfeld, R, Rarey, M, Zaliani, A, Chapman, H.N, Pearson, A, Betzel, C, Meents, A.
Deposit date:2020-09-24
Release date:2020-12-02
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.68 Å)
Cite:X-ray screening identifies active site and allosteric inhibitors of SARS-CoV-2 main protease.
Science, 372, 2021

224004

数据于2024-08-21公开中

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