Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 473 件

5TDK
DownloadVisualize
BU of 5tdk by Molmil
RNA decamer duplex with eight 2'-5'-linkages
分子名称: RNA (5'-R(*CP*CP*GP*GP*CP*GP*CP*CP*GP*G)-3'), STRONTIUM ION
著者Luo, Z, Sheng, J.
登録日2016-09-19
公開日2017-01-11
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.43 Å)
主引用文献Structural insights into RNA duplexes with multiple 2 -5 -linkages.
Nucleic Acids Res., 45, 2017
1CTP
DownloadVisualize
BU of 1ctp by Molmil
STRUCTURE OF THE MAMMALIAN CATALYTIC SUBUNIT OF CAMP-DEPENDENT PROTEIN KINASE AND AN INHIBITOR PEPTIDE DISPLAYS AN OPEN CONFORMATION
分子名称: MYRISTIC ACID, cAMP-DEPENDENT PROTEIN KINASE, cAMP-dependent protein kinase inhibitor, ...
著者Karlsson, R, Zheng, J, Xuong, N.H, Taylor, S.S, Sowadski, J.M.
登録日1993-04-08
公開日1994-01-31
最終更新日2024-06-05
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Structure of the mammalian catalytic subunit of cAMP-dependent protein kinase and an inhibitor peptide displays an open conformation.
Acta Crystallogr.,Sect.D, 49, 1993
4I8Y
DownloadVisualize
BU of 4i8y by Molmil
Structure of the unliganded N254Y/H258Y mutant of the phosphatidylinositol-specific phospholipase C from S. aureus
分子名称: 1-phosphatidylinositol phosphodiesterase, ACETATE ION, CHLORIDE ION
著者Goldstein, R.I, Cheng, J, Stec, B, Gershenson, A, Roberts, M.F.
登録日2012-12-04
公開日2013-04-10
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献The cation-pi box is a specific phosphatidylcholine membrane targeting motif.
J.Biol.Chem., 288, 2013
4I9J
DownloadVisualize
BU of 4i9j by Molmil
Structure of the N254Y/H258Y mutant of the phosphatidylinositol-specific phospholipase C from S. aureus bound to diC4PC
分子名称: (4S,7R)-7-(heptanoyloxy)-4-hydroxy-N,N,N-trimethyl-10-oxo-3,5,9-trioxa-4-phosphahexadecan-1-aminium 4-oxide, 1-phosphatidylinositol phosphodiesterase, ACETATE ION
著者Goldstein, R.I, Cheng, J, Stec, B, Gershenson, A, Roberts, M.F.
登録日2012-12-05
公開日2013-04-10
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献The cation-pi box is a specific phosphatidylcholine membrane targeting motif.
J.Biol.Chem., 288, 2013
3GBI
DownloadVisualize
BU of 3gbi by Molmil
The Rational Design and Structural Analysis of a Self-Assembled Three-Dimensional DNA Crystal
分子名称: DNA (5'-D(*GP*AP*GP*CP*AP*GP*CP*CP*TP*GP*TP*AP*CP*GP*GP*AP*CP*AP*TP*CP*A)-3'), DNA (5'-D(*TP*CP*TP*GP*AP*TP*GP*T)-3'), DNA (5'-D(P*CP*CP*GP*TP*AP*CP*A)-3'), ...
著者Birktoft, J.J, Zheng, J, Seeman, N.C.
登録日2009-02-19
公開日2009-09-01
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (4.018 Å)
主引用文献From molecular to macroscopic via the rational design of a self-assembled 3D DNA crystal.
Nature, 461, 2009
4I90
DownloadVisualize
BU of 4i90 by Molmil
Structure of the N254Y/H258Y mutant of the phosphatidylinositol-specific phospholipase C from S. aureus bound to choline
分子名称: 1-phosphatidylinositol phosphodiesterase, ACETATE ION, CHLORIDE ION, ...
著者Goldstein, R.I, Cheng, J, Stec, B, Gershenson, A, Roberts, M.F.
登録日2012-12-04
公開日2013-04-10
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献The cation-pi box is a specific phosphatidylcholine membrane targeting motif.
J.Biol.Chem., 288, 2013
4I9M
DownloadVisualize
BU of 4i9m by Molmil
Structure of the N254Y/H258Y mutant of the phosphatidylinositol-specific phospholipase C from Staphylococcus aureus bound to HEPES
分子名称: 1-phosphatidylinositol phosphodiesterase, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, SULFATE ION
著者Goldstein, R.I, Cheng, J, Stec, B, Gershenson, A, Roberts, M.F.
登録日2012-12-05
公開日2013-04-10
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献The cation-pi box is a specific phosphatidylcholine membrane targeting motif.
J.Biol.Chem., 288, 2013
4I9T
DownloadVisualize
BU of 4i9t by Molmil
Structure of the H258Y mutant of the phosphatidylinositol-specific phospholipase C from Staphylococcus aureus
分子名称: 1,2,3,4,5,6-HEXAHYDROXY-CYCLOHEXANE, 1-phosphatidylinositol phosphodiesterase, SULFATE ION, ...
著者Goldstein, R.I, Cheng, J, Stec, B, Gershenson, A, Roberts, M.F.
登録日2012-12-05
公開日2013-04-10
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献The cation-pi box is a specific phosphatidylcholine membrane targeting motif.
J.Biol.Chem., 288, 2013
5TDJ
DownloadVisualize
BU of 5tdj by Molmil
RNA decamer duplex with four 2'-5'-linkages
分子名称: RNA (5'-R(*CP*CP*GP*GP*CP*GP*CP*CP*GP*G)-3'), STRONTIUM ION
著者Luo, Z, Sheng, J.
登録日2016-09-19
公開日2017-01-11
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Structural insights into RNA duplexes with multiple 2 -5 -linkages.
Nucleic Acids Res., 45, 2017
3J8D
DownloadVisualize
BU of 3j8d by Molmil
Cryoelectron microscopy of dengue-Fab E104 complex at pH 5.5
分子名称: Envelope protein E, antibody E111 Fab fragment, glycoprotein DIII
著者Zhang, X.Z, Sheng, J, Austin, S.K, Hoornweg, T, Smit, J.M, Kuhn, R.J, Diamond, M.S, Rossmann, M.G.
登録日2014-10-13
公開日2014-11-12
最終更新日2024-02-21
実験手法ELECTRON MICROSCOPY (26 Å)
主引用文献Structure of Acidic pH Dengue Virus Showing the Fusogenic Glycoprotein Trimers.
J.Virol., 89, 2015
1P3R
DownloadVisualize
BU of 1p3r by Molmil
Crystal structure of the phosphotyrosin binding domain(PTB) of mouse Disabled 1(Dab1)
分子名称: Disabled homolog 2
著者Yun, M, Keshvara, L, Park, C.G, Zhang, Y.M, Dickerson, J.B, Zheng, J, Rock, C.O, Curran, T, Park, H.W.
登録日2003-04-18
公開日2003-08-05
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Crystal structures of the Dab homology domains of mouse disabled 1 and 2.
J.Biol.Chem., 278, 2003
1M7E
DownloadVisualize
BU of 1m7e by Molmil
Crystal structure of the phosphotyrosine binding domain(PTB) of mouse Disabled 2(Dab2):implications for Reeling signaling
分子名称: Disabled homolog 2, NGYENPTYK peptide
著者Yun, M, Keshvara, L, Park, C.-G, Zhang, Y.-M, Dickerson, J.B, Zheng, J, Rock, C.O, Curran, T, Park, H.-W.
登録日2002-07-19
公開日2003-08-05
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (2.45 Å)
主引用文献Crystal structures of the Dab homology domains of mouse disabled 1 and 2
J.Biol.Chem., 278, 2003
2KAW
DownloadVisualize
BU of 2kaw by Molmil
NMR structure of the mDvl1 PDZ domain in complex with its inhibitor
分子名称: Segment polarity protein dishevelled homolog DVL-1, [(1Z)-5-fluoro-2-methyl-1-{4-[methylsulfinyl]benzylidene}-1H-inden-3-yl]acetic acid
著者Lee, H.J, Shao, Y, Wang, N.X, Shi, D.L, Zheng, J.J.
登録日2008-11-17
公開日2009-09-15
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献Sulindac inhibits canonical Wnt signaling by blocking the PDZ domain of the protein Dishevelled.
Angew.Chem.Int.Ed.Engl., 48, 2009
1OQN
DownloadVisualize
BU of 1oqn by Molmil
Crystal structure of the phosphotyrosine binding domain (PTB) of mouse Disabled 1 (Dab1)
分子名称: Alzheimer's disease amyloid A4 protein homolog, D-MYO-INOSITOL-1,4,5-TRIPHOSPHATE, Disabled homolog 1
著者Yun, M, Keshvara, L, Park, C.-G, Zhang, Y.-M, Dickerson, J.B, Zheng, J, Rock, C.O, Curran, T, Park, H.-W.
登録日2003-03-10
公開日2003-08-05
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Crystal structures of the Dab homology domains of mouse disabled 1 and 2
J.Biol.Chem., 278, 2003
6XMK
DownloadVisualize
BU of 6xmk by Molmil
1.70 A resolution structure of SARS-CoV-2 3CL protease in complex with inhibitor 7j
分子名称: (1S,2S)-2-[(N-{[(4,4-difluorocyclohexyl)methoxy]carbonyl}-L-leucyl)amino]-1-hydroxy-3-[(3S)-2-oxopyrrolidin-3-yl]propane-1-sulfonic acid, 3C-like proteinase, TETRAETHYLENE GLYCOL
著者Lovell, S, Kashipathy, M.M, Battaile, K.P, Rathnayake, A.D, Zheng, J, Kim, Y, Nguyen, H.N, Chang, K.O, Groutas, W.C.
登録日2020-06-30
公開日2020-07-08
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献3C-like protease inhibitors block coronavirus replication in vitro and improve survival in MERS-CoV-infected mice.
Sci Transl Med, 12, 2020
5U0Q
DownloadVisualize
BU of 5u0q by Molmil
RNA-DNA heptamer duplex with one 2'-5'-linkage
分子名称: COBALT (II) ION, DNA/RNA (5'-R(*GP*GP*AP*GP*C)-D(P*T)-R(P*A)-3'), MAGNESIUM ION, ...
著者Luo, Z, Sheng, J.
登録日2016-11-26
公開日2017-11-29
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.43 Å)
主引用文献RNA-DNA heptamer duplex with one 2'-5'-linkage
To Be Published
5NWY
DownloadVisualize
BU of 5nwy by Molmil
2.9 A cryo-EM structure of VemP-stalled ribosome-nascent chain complex
分子名称: 16S rRNA, 23S rRNA, 30S ribosomal protein S10, ...
著者Su, T, Cheng, J, Sohmen, D, Hedman, R, Berninghausen, O, von Heijne, G, Wilson, D.N, Beckmann, R.
登録日2017-05-08
公開日2017-07-19
最終更新日2019-12-11
実験手法ELECTRON MICROSCOPY (2.93 Å)
主引用文献The force-sensing peptide VemP employs extreme compaction and secondary structure formation to induce ribosomal stalling.
Elife, 6, 2017
1APM
DownloadVisualize
BU of 1apm by Molmil
2.0 ANGSTROM REFINED CRYSTAL STRUCTURE OF THE CATALYTIC SUBUNIT OF CAMP-DEPENDENT PROTEIN KINASE COMPLEXED WITH A PEPTIDE INHIBITOR AND DETERGENT
分子名称: N-OCTANE, PEPTIDE INHIBITOR PKI(5-24), cAMP-DEPENDENT PROTEIN KINASE
著者Knighton, D.R, Bell, S.M, Zheng, J, Teneyck, L.F, Xuong, N.-H, Taylor, S.S, Sowadski, J.M.
登録日1993-01-18
公開日1993-04-15
最終更新日2021-11-03
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献2.0 A refined crystal structure of the catalytic subunit of cAMP-dependent protein kinase complexed with a peptide inhibitor and detergent.
Acta Crystallogr.,Sect.D, 49, 1993
6Z18
DownloadVisualize
BU of 6z18 by Molmil
Crystal structure of RNA-10mer: CCGG(N4,N4-dimethyl-C)GCCGG; R32 form
分子名称: RNA-10mer: CCGG(N4,N4-dimethyl-C)GCCGG
著者Ruszkowski, M, Sekula, B, Mao, S, Haruehanroengra, P, Sheng, J.
登録日2020-05-12
公開日2020-09-02
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (1.81 Å)
主引用文献Base pairing, structural and functional insights into N4-methylcytidine (m4C) and N4,N4-dimethylcytidine (m42C) modified RNA.
Nucleic Acids Res., 48, 2020
3NAO
DownloadVisualize
BU of 3nao by Molmil
A DNA Crystal Designed to Contain Two Molecules per Asymmetric Unit Cell
分子名称: DNA (5'-D(*AP*GP*CP*CP*TP*AP*CP*CP*TP*GP*CP*GP*TP*GP*GP*AP*CP*AP*GP*AP*C)-3'), DNA (5'-D(*CP*TP*TP*GP*AP*TP*GP*T)-3'), DNA (5'-D(*GP*AP*GP*CP*AP*GP*CP*CP*TP*GP*TP*AP*CP*GP*GP*AP*CP*AP*TP*CP*A)-3'), ...
著者Wang, T, Sha, R, Birktoft, J.J, Zheng, J, Mao, M, Seeman, N.C.
登録日2010-06-02
公開日2011-11-30
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (5.03 Å)
主引用文献A DNA crystal designed to contain two molecules per asymmetric unit.
J.Am.Chem.Soc., 132, 2010
2MX6
DownloadVisualize
BU of 2mx6 by Molmil
Complex structure of Dvl PDZ domain with ligand
分子名称: (PHQ)WV peptide, Segment polarity protein dishevelled homolog DVL-1
著者Zhang, X, Zheng, J.J.
登録日2014-12-15
公開日2015-12-30
実験手法SOLUTION NMR
主引用文献Protein-ligand interaction decoded by NMR chemical shift analysis
To be Published
2CPK
DownloadVisualize
BU of 2cpk by Molmil
CRYSTAL STRUCTURE OF THE CATALYTIC SUBUNIT OF CYCLIC ADENOSINE MONOPHOSPHATE-DEPENDENT PROTEIN KINASE
分子名称: PEPTIDE INHIBITOR 20-MER, cAMP-DEPENDENT PROTEIN KINASE, CATALYTIC SUBUNIT
著者Knighton, D.R, Zheng, J, Teneyck, L.F, Ashford, V.A, Xuong, N.-H, Taylor, S.S, Sowadski, J.M.
登録日1992-10-21
公開日1993-01-15
最終更新日2024-06-05
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Crystal structure of the catalytic subunit of cyclic adenosine monophosphate-dependent protein kinase.
Science, 253, 1991
2JTK
DownloadVisualize
BU of 2jtk by Molmil
A functional domain of a Wnt signal protein
分子名称: Dickkopf-related protein 2
著者Chen, L, Shao, Y, Huang, J, Zheng, J.
登録日2007-08-02
公開日2008-07-08
最終更新日2022-03-16
実験手法SOLUTION NMR
主引用文献Structural insight into the mechanisms of wnt signaling antagonism by dkk
J.Biol.Chem., 283, 2008
2R28
DownloadVisualize
BU of 2r28 by Molmil
The complex Structure of Calmodulin Bound to a Calcineurin Peptide
分子名称: CALCIUM ION, Calmodulin, Serine/threonine-protein phosphatase 2B catalytic subunit alpha isoform
著者Ye, Q, Zheng, J, Jia, Z.
登録日2007-08-24
公開日2008-07-01
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.86 Å)
主引用文献The complex structure of calmodulin bound to a calcineurin peptide.
Proteins, 73, 2008
6EZ8
DownloadVisualize
BU of 6ez8 by Molmil
Human Huntingtin-HAP40 complex structure
分子名称: Factor VIII intron 22 protein, Huntingtin
著者Guo, Q, Bin, H, Cheng, J, Pfeifer, G, Baumeister, W, Fernandez-Busnadiego, R, Kochanek, S.
登録日2017-11-14
公開日2018-02-21
最終更新日2019-12-11
実験手法ELECTRON MICROSCOPY (4 Å)
主引用文献The cryo-electron microscopy structure of huntingtin.
Nature, 555, 2018

223166

件を2024-07-31に公開中

PDB statisticsPDBj update infoContact PDBjnumon