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PDB: 162 results

4F46
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Crystal structure of wild type human CD38 in complex with NAADP and ADPRP
Descriptor: ADP-ribosyl cyclase 1, [[(2R,3R,4R,5R)-5-(6-aminopurin-9-yl)-3-oxidanyl-4-phosphonooxy-oxolan-2-yl]methoxy-oxidanyl-phosphoryl] [(2R,3S,4R,5R)-5-(3-carboxypyridin-1-ium-1-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methyl phosphate, [[(2R,3R,4R,5R)-5-(6-aminopurin-9-yl)-3-oxidanyl-4-phosphonooxy-oxolan-2-yl]methoxy-oxidanyl-phosphoryl] [(2R,3S,4R,5S)-3,4,5-tris(oxidanyl)oxolan-2-yl]methyl hydrogen phosphate
Authors:Zhang, H, Lee, H.C, Hao, Q.
Deposit date:2012-05-10
Release date:2013-04-03
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.69 Å)
Cite:Crystal Structures of Human CD38 in Complex with NAADP and ADPRP
MESSENGER, 2, 2013
4F45
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Crystal structure of human CD38 E226Q mutant in complex with NAADP
Descriptor: ADP-ribosyl cyclase 1, [[(2R,3R,4R,5R)-5-(6-aminopurin-9-yl)-3-oxidanyl-4-phosphonooxy-oxolan-2-yl]methoxy-oxidanyl-phosphoryl] [(2R,3S,4R,5R)-5-(3-carboxypyridin-1-ium-1-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methyl phosphate
Authors:Zhang, H, Lee, H.C, Hao, Q.
Deposit date:2012-05-10
Release date:2013-04-03
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal Structures of Human CD38 in Complex with NAADP and ADPRP
MESSENGER, 2, 2013
4F56
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The bicyclic intermediate structure provides insights into the desuccinylation mechanism of SIRT5
Descriptor: 3-[(2R,3aR,5R,6R,6aR)-5-({[(S)-{[(S)-{[(2R,3S,4R,5R)-5-(6-amino-9H-purin-9-yl)-3,4-dihydroxytetrahydrofuran-2-yl]methoxy}(hydroxy)phosphoryl]oxy}(hydroxy)phosphoryl]oxy}methyl)-2,6-dihydroxytetrahydrofuro[2,3-d][1,3]oxathiol-2-yl]propanoic acid, NAD-dependent lysine demalonylase and desuccinylase sirtuin-5, mitochondrial, ...
Authors:Zhou, Y, Hao, Q.
Deposit date:2012-05-11
Release date:2012-06-20
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:The Bicyclic Intermediate Structure Provides Insights into the Desuccinylation Mechanism of Human Sirtuin 5 (SIRT5)
J.Biol.Chem., 287, 2012
1REO
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L-amino acid oxidase from Agkistrodon halys pallas
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, AHPLAAO, CITRIC ACID, ...
Authors:Zhang, H, Teng, M, Niu, L, Wang, Y, Wang, Y, Liu, Q, Huang, Q, Hao, Q, Dong, Y, Liu, P.
Deposit date:2003-11-07
Release date:2004-05-04
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.31 Å)
Cite:Purification, partial characterization, crystallization and structural determination of AHP-LAAO, a novel L-amino-acid oxidase with cell apoptosis-inducing activity from Agkistrodon halys pallas venom.
Acta Crystallogr.,Sect.D, 60, 2004
1SK9
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Crystallographic snapshots of Aspergillus fumigatus phytase revealing its enzymatic dynamics
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 3-phytase A, PHOSPHATE ION
Authors:Liu, Q, Huang, Q, Lei, X.G, Hao, Q.
Deposit date:2004-03-04
Release date:2004-09-28
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (1.64 Å)
Cite:Crystallographic Snapshots of Aspergillus fumigatus Phytase, Revealing Its Enzymatic Dynamics
Structure, 12, 2004
1SKA
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Crystallographic snapshots of Aspergillus fumigatus phytase revealing its enzymatic dynamics
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 3-phytase A
Authors:Liu, Q, Huang, Q, Lei, X.G, Hao, Q.
Deposit date:2004-03-04
Release date:2004-09-28
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (1.69 Å)
Cite:Crystallographic Snapshots of Aspergillus fumigatus Phytase, Revealing Its Enzymatic Dynamics
Structure, 12, 2004
1RSG
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Crystal structure of the polyamine oxidase Fms1 from yeast
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, FMS1 protein
Authors:Huang, Q, Liu, Q, Hao, Q.
Deposit date:2003-12-09
Release date:2005-02-15
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structures of fms1 and its complex with spermine reveal substrate specificity.
J.Mol.Biol., 348, 2005
1V6P
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Crystal structure of Cobrotoxin
Descriptor: CHLORIDE ION, COPPER (II) ION, Cobrotoxin, ...
Authors:Lou, X, Tu, X, Wang, J, Teng, M, Niu, L, Liu, Q, Huang, Q, Hao, Q.
Deposit date:2003-12-03
Release date:2004-12-21
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (0.87 Å)
Cite:The atomic resolution crystal structure of atratoxin determined by single wavelength anomalous diffraction phasing
J.Biol.Chem., 279, 2004
1VB0
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Atomic resolution structure of atratoxin-b, one short-chain neurotoxin from Naja atra
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Cobrotoxin b, SULFATE ION
Authors:Lou, X, Liu, Q, Teng, M, Niu, L, Huang, Q, Hao, Q.
Deposit date:2004-02-20
Release date:2004-12-21
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (0.92 Å)
Cite:The atomic resolution crystal structure of atratoxin determined by single wavelength anomalous diffraction phasing
J.Biol.Chem., 279, 2004
1SKB
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Crystallographic snapshots of Aspergillus fumigatus phytase revealing its enzymatic dynamics
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 3-phytase A
Authors:Liu, Q, Huang, Q, Lei, X.G, Hao, Q.
Deposit date:2004-03-04
Release date:2004-09-28
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (1.58 Å)
Cite:Crystallographic Snapshots of Aspergillus fumigatus Phytase, Revealing Its Enzymatic Dynamics
Structure, 12, 2004
4X3O
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Sirt2 in complex with a myristoyl peptide
Descriptor: 1,2-ETHANEDIOL, NAD-dependent protein deacetylase sirtuin-2, ZINC ION, ...
Authors:Wang, Y, Zhang, W.Z, Hao, Q.
Deposit date:2014-12-01
Release date:2016-01-13
Last modified:2022-04-20
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Deacylation Mechanism by SIRT2 Revealed in the 1'-SH-2'-O-Myristoyl Intermediate Structure.
Cell Chem Biol, 24, 2017
4X3P
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Sirt2 in complex with a myristoyl peptide
Descriptor: 1,2-ETHANEDIOL, CARBA-NICOTINAMIDE-ADENINE-DINUCLEOTIDE, NAD-dependent protein deacetylase sirtuin-2, ...
Authors:Wang, Y, Zhang, W, Hao, Q.
Deposit date:2014-12-01
Release date:2016-01-13
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Deacylation Mechanism by SIRT2 Revealed in the 1'-SH-2'-O-Myristoyl Intermediate Structure.
Cell Chem Biol, 24, 2017
1ZL9
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BU of 1zl9 by Molmil
Crystal Structure of a major nematode C.elegans specific GST (CE01613)
Descriptor: GLUTATHIONE, glutathione S-transferase 5
Authors:Kriksunov, I.A, Liu, Q, Schuller, D.J, Campbell, A.M, Barrett, J, Brophy, P.M, Hao, Q.
Deposit date:2005-05-05
Release date:2005-05-17
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.01 Å)
Cite:Crystal structure of a major nematode C.elegans specific GST (CE01613)
To be Published
1YH3
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BU of 1yh3 by Molmil
Crystal structure of human CD38 extracellular domain
Descriptor: ADP-ribosyl cyclase 1
Authors:Liu, Q, Kriksunov, I.A, Graeff, R, Munshi, C, Lee, H.C, Hao, Q.
Deposit date:2005-01-06
Release date:2005-09-27
Last modified:2021-10-20
Method:X-RAY DIFFRACTION (1.91 Å)
Cite:Crystal structure of human CD38 extracellular domain.
Structure, 13, 2005
2A5Y
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BU of 2a5y by Molmil
Structure of a CED-4/CED-9 complex
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, Apoptosis regulator ced-9, MAGNESIUM ION, ...
Authors:Yan, N, Liu, Q, Hao, Q, Gu, L, Shi, Y.
Deposit date:2005-07-01
Release date:2005-10-11
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structure of the CED-4-CED-9 complex provides insights into programmed cell death in Caenorhabditis elegans.
Nature, 437, 2005
4TMF
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BU of 4tmf by Molmil
Crystal structure of human CD38 in complex with hydrolysed compound JMS713
Descriptor: 5-O-[(R)-{[(S)-[4-(8-amino-6-oxo-1,6-dihydro-9H-purin-9-yl)butoxy](hydroxy)phosphoryl]oxy}(hydroxy)phosphoryl]-alpha-D- ribofuranose, ADP-ribosyl cyclase/cyclic ADP-ribose hydrolase 1
Authors:Zhang, H, Swarbrick, J, Potter, B, Hao, Q.
Deposit date:2014-06-01
Release date:2015-05-13
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Cyclic adenosine 5'-diphosphate ribose analogs without a "southern" ribose inhibit ADP-ribosyl cyclase-hydrolase CD38.
J.Med.Chem., 57, 2014
1SK8
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BU of 1sk8 by Molmil
Crystallographic snapshots of Aspergillus fumigatus phytase revealing its enzymatic dynamics
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 3-phytase A, PHOSPHATE ION
Authors:Liu, Q, Huang, Q.Q, Lei, X.G, Hao, Q.
Deposit date:2004-03-04
Release date:2005-02-08
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Crystallographic Snapshots of Aspergillus fumigatus Phytase, Revealing Its Enzymatic Dynamics
Structure, 12, 2004
2INF
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BU of 2inf by Molmil
Crystal Structure of Uroporphyrinogen Decarboxylase from Bacillus subtilis
Descriptor: Uroporphyrinogen decarboxylase
Authors:Fan, J, Liu, Q, Hao, Q, Teng, M.K, Niu, L.W.
Deposit date:2006-10-06
Release date:2006-10-24
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal structure of uroporphyrinogen decarboxylase from Bacillus subtilis
J.Bacteriol., 189, 2007
2I67
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Structural Basis for the Mechanistic Understanding Human CD38 Controlled Multiple Catalysis
Descriptor: ADENOSINE-5-DIPHOSPHORIBOSE, ADP-ribosyl cyclase 1
Authors:Liu, Q, Kriksunov, I.A, Graeff, R, Munshi, C, Lee, H.C, Hao, Q.
Deposit date:2006-08-28
Release date:2006-09-05
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.71 Å)
Cite:Structural basis for the mechanistic understanding of human CD38-controlled multiple catalysis.
J.Biol.Chem., 281, 2006
2HCT
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Acidic residues at the active sites of CD38 and ADP-ribosyl cyclase determine NAAPD synthesis and hydrolysis activities
Descriptor: ADP-ribosyl cyclase 1, BETA-NICOTINAMIDE RIBOSE MONOPHOSPHATE
Authors:Liu, Q, Kriksunov, I.A, Hao, Q, Graeff, R, Lee, H.C.
Deposit date:2006-06-18
Release date:2006-08-22
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Acidic residues at the active sites of CD38 and ADP-ribosyl cyclase determine nicotinic acid adenine dinucleotide phosphate (NAADP) synthesis and hydrolysis activities.
J.Biol.Chem., 281, 2006
2I66
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Structural Basis for the Mechanistic Understanding Human CD38 Controlled Multiple Catalysis
Descriptor: ADP-ribosyl cyclase 1, [(2R,3R,4R,5R)-5-(2-AMINO-6-OXO-1,6-DIHYDRO-9H-PURIN-9-YL)-3,4-DIHYDROXYTETRAHYDROFURAN-2-YL]METHYL [(2R,3S,4R,5S)-3,4,5-TRIHYDROXYTETRAHYDROFURAN-2-YL]METHYL DIHYDROGEN DIPHOSPHATE, [(2R,3R,4R,5R)-5-(2-AMINO-6-OXO-1,6-DIHYDRO-9H-PURIN-9-YL)-3,4-DIHYDROXYTETRAHYDROFURAN-2-YL]METHYL [(2R,3S,4S)-3,4-DIHYDROXYTETRAHYDROFURAN-2-YL]METHYL DIHYDROGEN DIPHOSPHATE
Authors:Liu, Q, Kriksunov, I.A, Graeff, R, Munshi, C, Lee, H.C, Hao, Q.
Deposit date:2006-08-28
Release date:2006-09-05
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structural basis for the mechanistic understanding of human CD38-controlled multiple catalysis.
J.Biol.Chem., 281, 2006
2I65
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Structural Basis for the Mechanistic Understanding Human CD38 Controlled Multiple Catalysis
Descriptor: ADP-ribosyl cyclase 1, NICOTINAMIDE-ADENINE-DINUCLEOTIDE
Authors:Liu, Q, Kriksunov, I.A, Graeff, R, Munshi, C, Lee, H.C, Hao, Q.
Deposit date:2006-08-28
Release date:2006-09-05
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural basis for the mechanistic understanding of human CD38-controlled multiple catalysis.
J.Biol.Chem., 281, 2006
5BNF
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Apo structure of porcine CD38
Descriptor: Uncharacterized protein
Authors:Ting, K.Y, Leung, C.P.F, Graeff, R.M, Lee, H.C, Hao, Q, Kotaka, M.
Deposit date:2015-05-26
Release date:2016-05-25
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Porcine CD38 exhibits prominent secondary NAD(+) cyclase activity.
Protein Sci., 25, 2016
5B7B
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Crystal structure of Nucleoprotein-nucleozin complex
Descriptor: Nucleoprotein, [4-(2-chloro-4-nitrophenyl)piperazin-1-yl](5-methyl-3-phenyl-1,2-oxazol-4-yl)methanone
Authors:Pang, B, Zhang, W.Z, Zhang, H.M, Hao, Q.
Deposit date:2016-06-06
Release date:2016-07-06
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (3 Å)
Cite:Structural Characterization of H1N1 Nucleoprotein-Nucleozin Binding Sites
Sci Rep, 6, 2016
7UFG
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BU of 7ufg by Molmil
Cryo-EM structure of PAPP-A in complex with IGFBP5
Descriptor: Insulin-like growth factor-binding protein 5, Pappalysin-1, ZINC ION
Authors:Judge, R.A, Jain, R, Hao, Q, Ouch, C, Sridar, J, Smith, C.L, Wang, J.C.K, Eaton, D.
Deposit date:2022-03-22
Release date:2022-09-28
Method:ELECTRON MICROSCOPY (3.28 Å)
Cite:Structure of the PAPP-ABP5 complex reveals mechanism of substrate recognition
Nat Commun, 13, 2022

221051

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