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PDB: 158 results

8CVT
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BU of 8cvt by Molmil
Human 19S-20S proteasome, state SD2
Descriptor: 26S protease regulatory subunit 10B, 26S protease regulatory subunit 8, 26S proteasome complex subunit SEM1, ...
Authors:Zhao, J.
Deposit date:2022-05-18
Release date:2022-11-02
Method:ELECTRON MICROSCOPY (3 Å)
Cite:Structural insights into the human PA28-20S proteasome enabled by efficient tagging and purification of endogenous proteins.
Proc.Natl.Acad.Sci.USA, 119, 2022
8CVR
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BU of 8cvr by Molmil
Human 20S proteasome with MG-132
Descriptor: N-[(benzyloxy)carbonyl]-L-leucyl-N-[(2S)-4-methyl-1-oxopentan-2-yl]-L-leucinamide, Proteasome subunit alpha type-1, Proteasome subunit alpha type-2, ...
Authors:Zhao, J.
Deposit date:2022-05-18
Release date:2022-11-02
Last modified:2024-06-12
Method:ELECTRON MICROSCOPY (2.7 Å)
Cite:Structural insights into the human PA28-20S proteasome enabled by efficient tagging and purification of endogenous proteins.
Proc.Natl.Acad.Sci.USA, 119, 2022
8CVS
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BU of 8cvs by Molmil
Human PA200-20S proteasome with MG-132
Descriptor: INOSITOL HEXAKISPHOSPHATE, N-[(benzyloxy)carbonyl]-L-leucyl-N-[(2S)-4-methyl-1-oxopentan-2-yl]-L-leucinamide, Proteasome activator complex subunit 4, ...
Authors:Zhao, J.
Deposit date:2022-05-18
Release date:2022-11-02
Last modified:2024-06-12
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Structural insights into the human PA28-20S proteasome enabled by efficient tagging and purification of endogenous proteins.
Proc.Natl.Acad.Sci.USA, 119, 2022
8CXB
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BU of 8cxb by Molmil
Human PA28-20S (PA28-4a3b)
Descriptor: Proteasome activator complex subunit 1, Proteasome activator complex subunit 2, Proteasome subunit alpha type-1, ...
Authors:Zhao, J, Makhija, S, Huang, B, Cheng, Y.
Deposit date:2022-05-20
Release date:2022-11-02
Last modified:2024-06-12
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:Structural insights into the human PA28-20S proteasome enabled by efficient tagging and purification of endogenous proteins.
Proc.Natl.Acad.Sci.USA, 119, 2022
3J9T
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BU of 3j9t by Molmil
Yeast V-ATPase state 1
Descriptor: V-type proton ATPase catalytic subunit A, V-type proton ATPase subunit B, V-type proton ATPase subunit C, ...
Authors:Zhao, J, Benlekbir, S, Rubinstein, J.L.
Deposit date:2015-02-23
Release date:2015-05-13
Last modified:2024-02-21
Method:ELECTRON MICROSCOPY (6.9 Å)
Cite:Electron cryomicroscopy observation of rotational states in a eukaryotic V-ATPase.
Nature, 521, 2015
3J9V
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BU of 3j9v by Molmil
Yeast V-ATPase state 3
Descriptor: V-type proton ATPase catalytic subunit A, V-type proton ATPase subunit B, V-type proton ATPase subunit C, ...
Authors:Zhao, J, Benlekbir, S, Rubinstein, J.L.
Deposit date:2015-02-23
Release date:2015-05-13
Last modified:2024-02-21
Method:ELECTRON MICROSCOPY (8.3 Å)
Cite:Electron cryomicroscopy observation of rotational states in a eukaryotic V-ATPase.
Nature, 521, 2015
3J9U
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BU of 3j9u by Molmil
Yeast V-ATPase state 2
Descriptor: V-type proton ATPase catalytic subunit A, V-type proton ATPase subunit B, V-type proton ATPase subunit C, ...
Authors:Zhao, J, Benlekbir, S, Rubinstein, J.L.
Deposit date:2015-02-23
Release date:2015-05-13
Last modified:2024-02-21
Method:ELECTRON MICROSCOPY (7.6 Å)
Cite:Electron cryomicroscopy observation of rotational states in a eukaryotic V-ATPase.
Nature, 521, 2015
5I8I
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BU of 5i8i by Molmil
Crystal Structure of the K. lactis Urea Amidolyase
Descriptor: Urea Amidolyase
Authors:Zhao, J, Xiang, S.
Deposit date:2016-02-19
Release date:2017-04-05
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (6.5 Å)
Cite:Structure and function of urea amidolyase.
Biosci. Rep., 38, 2018
3OK5
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BU of 3ok5 by Molmil
Structure of the H55D mutant of dehaloperoxidase-hemoglobin A from Amphitriti ornata with 4-Bromophenol inhibitor
Descriptor: 4-BROMOPHENOL, Dehaloperoxidase A, PROTOPORPHYRIN IX CONTAINING FE, ...
Authors:Zhao, J, De Serrano, V.S, Franzen, S.
Deposit date:2010-08-24
Release date:2011-09-07
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.72 Å)
Cite:Effect of the H55D mutation on the kinetics and structure of dehaloperoxidase-hemoglobin A
To be Published
3OJ1
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BU of 3oj1 by Molmil
Structure of the H55D mutant of dehaloperoxidase-hemoglobin A from Amphitrite ornata
Descriptor: Dehaloperoxidase A, PROTOPORPHYRIN IX CONTAINING FE, SULFATE ION
Authors:Zhao, J, De Serrano, V.S, Franzen, S.
Deposit date:2010-08-20
Release date:2011-08-24
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.52 Å)
Cite:Effect of the H55D mutation on the kinetics and structure of dehaloperoxidase-hemoglobin A
To be Published
7FB5
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BU of 7fb5 by Molmil
Crystal structure of FAM134B/GABARAP complex
Descriptor: Gamma-aminobutyric acid receptor-associated protein, Reticulophagy regulator 1
Authors:Zhao, J, Li, J.
Deposit date:2021-07-08
Release date:2022-03-23
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.84 Å)
Cite:The crystal structure of the FAM134B-GABARAP complex provides mechanistic insights into the selective binding of FAM134 to the GABARAP subfamily.
Febs Open Bio, 12, 2022
2L54
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BU of 2l54 by Molmil
Solution structure of the Zalpha domain mutant of ADAR1 (N43A,Y47A)
Descriptor: Double-stranded RNA-specific adenosine deaminase
Authors:Zhao, J, Pervushin, K, Feng, S, Droge, P.
Deposit date:2010-10-24
Release date:2011-01-12
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Alternate rRNA secondary structures as regulators of translation
Nat.Struct.Mol.Biol., 18, 2011
4GZG
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BU of 4gzg by Molmil
Crystal structures of DHPA-CO complex
Descriptor: CARBON MONOXIDE, Dehaloperoxidase A, PROTOPORPHYRIN IX CONTAINING FE, ...
Authors:Zhao, J, Franzen, S.
Deposit date:2012-09-06
Release date:2013-09-11
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.49 Å)
Cite:The role of distal histidine in carbonmonoxide DHP structure
To be Published
5VOX
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BU of 5vox by Molmil
Yeast V-ATPase in complex with Legionella pneumophila effector SidK (rotational state 1)
Descriptor: V-type proton ATPase catalytic subunit A,V-type proton ATPase catalytic subunit A, V-type proton ATPase subunit B, V-type proton ATPase subunit C, ...
Authors:Zhao, J.
Deposit date:2017-05-03
Release date:2017-06-21
Last modified:2024-03-13
Method:ELECTRON MICROSCOPY (6.8 Å)
Cite:Molecular basis for the binding and modulation of V-ATPase by a bacterial effector protein.
PLoS Pathog., 13, 2017
4JYQ
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BU of 4jyq by Molmil
DHP-CO crystal structure
Descriptor: CARBON MONOXIDE, Dehaloperoxidase A, PROTOPORPHYRIN IX CONTAINING FE, ...
Authors:Zhao, J, Srajer, V, Franzen, S.
Deposit date:2013-03-31
Release date:2014-04-23
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Observation of protein valves for the control of the internal flow of small molecules using time-resolved X-ray crystallography
To be Published
7M5T
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BU of 7m5t by Molmil
Solution NMR structure of de novo designed protein 0515
Descriptor: De novo designed protein 0515
Authors:Ramelot, T.A, Hao, J, Baker, D, Montelione, G.T.
Deposit date:2021-03-24
Release date:2021-12-15
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:De novo protein design by deep network hallucination.
Nature, 600, 2021
6E5V
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BU of 6e5v by Molmil
human mGlu8 receptor amino terminal domain in complex with (S)-3,4-Dicarboxyphenylglycine (DCPG)
Descriptor: 4-[(S)-amino(carboxy)methyl]benzene-1,2-dicarboxylic acid, CHLORIDE ION, Metabotropic glutamate receptor 8
Authors:Chen, Q, Ho, J.D, Ashok, S, Vargas, M.C, Wang, J, Atwell, S, Bures, M, Schkeryantz, J.M, Monn, J.A, Hao, J.
Deposit date:2018-07-23
Release date:2018-11-07
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.95 Å)
Cite:Structural Basis for ( S)-3,4-Dicarboxyphenylglycine (DCPG) As a Potent and Subtype Selective Agonist of the mGlu8Receptor.
J. Med. Chem., 61, 2018
7JYZ
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BU of 7jyz by Molmil
Solution NMR structure and dynamics of human Brd3 ET in complex with MLV IN CTD
Descriptor: Bromodomain-containing protein 3, Integrase
Authors:Aiyer, S, Liu, G, Swapna, G.V.T, Hao, J, Ma, L.C, Roth, M.J, Montelione, G.T.
Deposit date:2020-09-01
Release date:2021-06-23
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:A common binding motif in the ET domain of BRD3 forms polymorphic structural interfaces with host and viral proteins.
Structure, 29, 2021
6BT5
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BU of 6bt5 by Molmil
Human mGlu8 Receptor complexed with L-AP4
Descriptor: (2S)-2-amino-4-phosphonobutanoic acid, 2-acetamido-2-deoxy-beta-D-glucopyranose, Metabotropic glutamate receptor 8
Authors:Schkeryantz, J.M, Chen, Q, Ho, J.D, Atwell, S, Zhang, A, Vargas, M.C, Wang, J, Monn, J.A, Hao, J.
Deposit date:2017-12-05
Release date:2018-02-07
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.92 Å)
Cite:Determination of L-AP4-bound human mGlu8 receptor amino terminal domain structure and the molecular basis for L-AP4's group III mGlu receptor functional potency and selectivity.
Bioorg. Med. Chem. Lett., 28, 2018
6BSZ
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BU of 6bsz by Molmil
Human mGlu8 Receptor complexed with glutamate
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, GLUTAMIC ACID, Metabotropic glutamate receptor 8, ...
Authors:Schkeryantz, J.M, Chen, Q, Ho, J.D, Atwell, S, Zhang, A, Vargas, M.C, Wang, J, Monn, J.A, Hao, J.
Deposit date:2017-12-04
Release date:2018-02-07
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:Determination of L-AP4-bound human mGlu8 receptor amino terminal domain structure and the molecular basis for L-AP4's group III mGlu receptor functional potency and selectivity.
Bioorg. Med. Chem. Lett., 28, 2018
7YQD
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BU of 7yqd by Molmil
EM structure of human PA28gamma (wild-type)
Descriptor: Proteasome activator complex subunit 3
Authors:Chen, D.-D, Hao, J, Yun, C.-H.
Deposit date:2022-08-06
Release date:2022-09-21
Last modified:2024-07-03
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Atomic resolution Cryo-EM structure of human proteasome activator PA28 gamma.
Int.J.Biol.Macromol., 219, 2022
7YQC
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BU of 7yqc by Molmil
EM structure of human PA28gamma
Descriptor: Proteasome activator complex subunit 3
Authors:Chen, D.-D, Hao, J, Shen, C.-H, Yun, C.-H.
Deposit date:2022-08-06
Release date:2022-09-21
Last modified:2024-07-03
Method:ELECTRON MICROSCOPY (2.82 Å)
Cite:Atomic resolution Cryo-EM structure of human proteasome activator PA28 gamma.
Int.J.Biol.Macromol., 219, 2022
5DO2
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BU of 5do2 by Molmil
Complex structure of MERS-RBD bound with 4C2 antibody
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 4C2 heavy chain, 4C2 light chain, ...
Authors:Li, Y, Wan, Y, Liu, P, Zhao, J, Lu, G, Qi, J, Wang, Q, Lu, X, Wu, Y, Liu, W, Yuen, K.Y, Perlman, S, Gao, G.F, Yan, J.
Deposit date:2015-09-10
Release date:2015-10-14
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.409 Å)
Cite:A humanized neutralizing antibody against MERS-CoV targeting the receptor-binding domain of the spike protein.
Cell Res., 25, 2015
8GX3
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BU of 8gx3 by Molmil
The crystal structure of human Calpain-1 protease core in complex with 14c
Descriptor: CALCIUM ION, Calpain-1 catalytic subunit, N-[(2S)-3-cyclohexyl-1-[[(2S,3S)-4-(cyclopropylamino)-3-oxidanyl-4-oxidanylidene-1-[(3S)-2-oxidanylidenepiperidin-3-yl]butan-2-yl]amino]-1-oxidanylidene-propan-2-yl]-1-benzofuran-2-carboxamide
Authors:Zhao, Y, Zhao, J, Shao, M, Yang, H, Rao, Z.
Deposit date:2022-09-18
Release date:2023-09-20
Method:X-RAY DIFFRACTION (1.99 Å)
Cite:The crystal structure of human Calpain-1 protease core in complex with 14c
To Be Published
8GX2
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BU of 8gx2 by Molmil
The crystal structure of human CtsL in complex with 14c
Descriptor: DIMETHYL SULFOXIDE, N-[(2S)-3-cyclohexyl-1-[[(2S,3S)-4-(cyclopropylamino)-3-oxidanyl-4-oxidanylidene-1-[(3S)-2-oxidanylidenepiperidin-3-yl]butan-2-yl]amino]-1-oxidanylidene-propan-2-yl]-1-benzofuran-2-carboxamide, Procathepsin L
Authors:Zhao, Y, Shao, M, Zhao, J, Yang, H, Rao, Z.
Deposit date:2022-09-18
Release date:2023-09-20
Method:X-RAY DIFFRACTION (2 Å)
Cite:The crystal structure of human CtsL in complex with 14a
To Be Published

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