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PDB: 861 results

4KMD
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BU of 4kmd by Molmil
Crystal structure of Sufud60-Gli1p
Descriptor: 2,3-DIHYDROXY-1,4-DITHIOBUTANE, GLYCEROL, Sufu, ...
Authors:Zhang, Y, Qi, X, Zhang, Z, Wu, G.
Deposit date:2013-05-08
Release date:2013-11-20
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structural insight into the mutual recognition and regulation between Suppressor of Fused and Gli/Ci.
Nat Commun, 4, 2013
4KM9
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BU of 4km9 by Molmil
Crystal structure of human Suppressor of Fused
Descriptor: Suppressor of fused homolog
Authors:Zhang, Y, Qi, X, Zhang, Z, Wu, G.
Deposit date:2013-05-08
Release date:2013-11-20
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (3.19 Å)
Cite:Structural insight into the mutual recognition and regulation between Suppressor of Fused and Gli/Ci.
Nat Commun, 4, 2013
1SG0
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BU of 1sg0 by Molmil
Crystal structure analysis of QR2 in complex with resveratrol
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, NRH dehydrogenase [quinone] 2, RESVERATROL, ...
Authors:Buryanovskyy, L, Fu, Y, Boyd, M, Ma, Y, Tsieh, T.C, Wu, J.M, Zhang, Z.
Deposit date:2004-02-22
Release date:2005-01-25
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Crystal structure of quinone reductase 2 in complex with resveratrol
Biochemistry, 43, 2004
4KM8
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BU of 4km8 by Molmil
Crystal structure of Sufud60
Descriptor: Suppressor of fused homolog
Authors:Zhang, Y, Qi, X, Zhang, Z, Wu, G.
Deposit date:2013-05-08
Release date:2013-11-20
Last modified:2017-11-15
Method:X-RAY DIFFRACTION (2.26 Å)
Cite:Structural insight into the mutual recognition and regulation between Suppressor of Fused and Gli/Ci.
Nat Commun, 4, 2013
2MOX
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BU of 2mox by Molmil
solution structure of tandem SH3 domain of Sorbin and SH3 domain-containing protein 1
Descriptor: Sorbin and SH3 domain-containing protein 1
Authors:Zhao, D, Wang, C, Zhang, J, Wu, J, Shi, Y, Zhang, Z, Gong, Q.
Deposit date:2014-05-07
Release date:2014-05-28
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Structural investigation of the interaction between the tandem SH3 domains of c-Cbl-associated protein and vinculin
J.Struct.Biol., 187, 2014
2ASQ
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BU of 2asq by Molmil
Solution Structure of SUMO-1 in Complex with a SUMO-binding Motif (SBM)
Descriptor: Protein inhibitor of activated STAT2, Small ubiquitin-related modifier 1
Authors:Song, J, Zhang, Z, Hu, W, Chen, Y.
Deposit date:2005-08-23
Release date:2005-10-11
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Small Ubiquitin-like Modifier (SUMO) Recognition of a SUMO Binding Motif: A reversal of the bound orientation
J.Biol.Chem., 280, 2005
7E7Q
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BU of 7e7q by Molmil
Cryo-EM structure of human ABCA4 in ATP-bound state
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, ...
Authors:Xie, T, Zhang, Z.K, Gong, X.
Deposit date:2021-02-26
Release date:2021-06-30
Last modified:2021-07-07
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Structural basis of substrate recognition and translocation by human ABCA4.
Nat Commun, 12, 2021
7E7I
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BU of 7e7i by Molmil
Cryo-EM structure of human ABCA4 in the apo state
Descriptor: 1,2-Distearoyl-sn-glycerophosphoethanolamine, 2-acetamido-2-deoxy-beta-D-glucopyranose, Retinal-specific phospholipid-transporting ATPase ABCA4, ...
Authors:Xie, T, Zhang, Z.K, Gong, X.
Deposit date:2021-02-26
Release date:2021-06-30
Last modified:2021-07-07
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Structural basis of substrate recognition and translocation by human ABCA4.
Nat Commun, 12, 2021
7V9G
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BU of 7v9g by Molmil
Native BEN4 domain of protein Bend3 with DNA
Descriptor: BEN domain-containing protein 3, DNA (5'-D(*GP*CP*AP*CP*CP*GP*CP*GP*TP*GP*GP*GP*GP*CP*CP*A)-3'), DNA (5'-D(*TP*GP*GP*CP*CP*CP*CP*AP*CP*GP*CP*GP*GP*TP*GP*C)-3')
Authors:Zhang, J, Zhang, Y, You, Q, Huang, C, Zhang, T, Wang, M, Zhang, T, Yang, X, Xiong, J, Li, Y, Liu, C.P, Zhang, Z, Xu, R.M, Zhu, B.
Deposit date:2021-08-25
Release date:2022-02-16
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (3.5 Å)
Cite:Highly enriched BEND3 prevents the premature activation of bivalent genes during differentiation.
Science, 375, 2022
7V9I
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BU of 7v9i by Molmil
The Monomer mutant of BEN4 domain of protein Bend3 with DNA
Descriptor: BEN domain-containing protein 3, DNA (5'-D(*AP*CP*CP*GP*CP*GP*TP*GP*GP*GP*GP*C)-3'), DNA (5'-D(*GP*CP*CP*CP*CP*AP*CP*GP*CP*GP*GP*T)-3')
Authors:Zhang, J, Zhang, Y, You, Q, Huang, C, Zhang, T, Wang, M, Zhang, T, Yang, X, Xiong, J, Li, Y, Liu, C.P, Zhang, Z, Xu, R.M, Zhu, B.
Deposit date:2021-08-25
Release date:2022-02-16
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (3.5 Å)
Cite:Highly enriched BEND3 prevents the premature activation of bivalent genes during differentiation.
Science, 375, 2022
7V9H
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BU of 7v9h by Molmil
The BEN3 domain of protein Bend3
Descriptor: BEN domain-containing protein 3
Authors:Zhang, J, Zhang, Y, You, Q, Huang, C, Zhang, T, Wang, M, Zhang, T, Yang, X, Xiong, J, Li, Y, Liu, C.P, Zhang, Z, Xu, R.M, Zhu, B.
Deposit date:2021-08-25
Release date:2022-02-16
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (2.692 Å)
Cite:Highly enriched BEND3 prevents the premature activation of bivalent genes during differentiation.
Science, 375, 2022
7V9F
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BU of 7v9f by Molmil
Selenomethionine mutant (L740Sem) of BEN4 domain of protein Bend3 with DNA
Descriptor: BEN domain-containing protein 3, CITRIC ACID, DNA (5'-D(*GP*CP*AP*CP*CP*GP*CP*GP*TP*GP*GP*GP*GP*CP*CP*A)-3'), ...
Authors:Zhang, J, Zhang, Y, You, Q, Huang, C, Zhang, T, Wang, M, Zhang, T, Yang, X, Xiong, J, Li, Y, Liu, C.P, Zhang, Z, Xu, R.M, Zhu, B.
Deposit date:2021-08-25
Release date:2022-02-16
Last modified:2022-03-16
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Highly enriched BEND3 prevents the premature activation of bivalent genes during differentiation.
Science, 375, 2022
5XRF
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BU of 5xrf by Molmil
Crystal structure of Da-36, a thrombin-like enzyme from Deinagkistrodon acutus
Descriptor: DI(HYDROXYETHYL)ETHER, Snake venom serine protease Da-36, alpha-D-mannopyranose-(1-6)-beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Lin, C.-C, Wu, W.-G, Fan, Q, Tian, J, Zhang, Z, Zheng, Y.
Deposit date:2017-06-08
Release date:2018-06-13
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structure of Da-36, a thrombin-like enzyme from Deinagkistrodon acutus
To Be Published
2MNG
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BU of 2mng by Molmil
Apo Structure of human HCN4 CNBD solved by NMR
Descriptor: Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 4
Authors:Akimoto, M, Zhang, Z, Boulton, S, Selvaratnam, R, VanSchouwen, B, Gloyd, M, Accili, E.A, Lange, O.F, Melacini, G.
Deposit date:2014-04-03
Release date:2014-06-04
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:A mechanism for the auto-inhibition of hyperpolarization-activated cyclic nucleotide-gated (HCN) channel opening and its relief by cAMP.
J.Biol.Chem., 289, 2014
2IHL
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BU of 2ihl by Molmil
LYSOZYME (E.C.3.2.1.17) (JAPANESE QUAIL)
Descriptor: JAPANESE QUAIL EGG WHITE LYSOZYME, SODIUM ION
Authors:Houdusse, A, Bentley, G.A, Poljak, R.J, Souchon, H, Zhang, Z.
Deposit date:1993-06-29
Release date:1994-01-31
Last modified:2024-06-05
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Three-dimensional structure of a heteroclitic antigen-antibody cross-reaction complex.
Proc.Natl.Acad.Sci.Usa, 90, 1993
4HUH
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BU of 4huh by Molmil
Structure of the bacteriophage T4 tail terminator protein, gp15 (C-terminal truncation mutant 1-261).
Descriptor: Tail connector protein Gp15
Authors:Fokine, A, Zhang, Z, Kanamaru, S, Bowman, V.D, Aksyuk, A, Arisaka, F, Rao, V.B, Rossmann, M.G.
Deposit date:2012-11-02
Release date:2013-02-27
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:The molecular architecture of the bacteriophage t4 neck.
J.Mol.Biol., 425, 2013
7WZB
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BU of 7wzb by Molmil
lipopolysaccharide assembly protein LapB (open)
Descriptor: Lipopolysaccharide assembly protein B, TRIETHYLENE GLYCOL, ZINC ION
Authors:Yan, L, Dong, H, Li, H, Liu, X, Deng, Z, Dong, C, Zhang, Z.
Deposit date:2022-02-17
Release date:2023-03-01
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:lipopolysaccharide assembly protein LapB (open)
To Be Published
4J51
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BU of 4j51 by Molmil
Cyrstal structure of protein tyrosine phosphatase Lyp catalytic domain complex with small molecular inhibitor L75N04
Descriptor: 3-[(3-chlorophenyl)ethynyl]-2-{4-[2-(cyclopropylamino)-2-oxoethoxy]phenyl}-6-hydroxy-1-benzofuran-5-carboxylic acid, Tyrosine-protein phosphatase non-receptor type 22
Authors:Liu, D, He, Y, Zhang, Z.-Y.
Deposit date:2013-02-07
Release date:2013-07-24
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:A Potent and Selective Small-Molecule Inhibitor for the Lymphoid-Specific Tyrosine Phosphatase (LYP), a Target Associated with Autoimmune Diseases.
J.Med.Chem., 56, 2013
4JN9
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BU of 4jn9 by Molmil
Crystal structure of the DepH
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, DepH, ...
Authors:Li, J, Wang, C, Zhang, Z.M, Zhou, J.H, Cheng, E.
Deposit date:2013-03-14
Release date:2014-04-09
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:The structural basis of an NADP+-independent dithiol oxidase in FK228 biosynthesis.
Sci Rep, 4, 2014
7Y1T
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BU of 7y1t by Molmil
Complex of integrin alphaV/beta8 and L-TGF-beta1 at a ratio of 1:2
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Duan, Z, Zhang, Z.
Deposit date:2022-06-08
Release date:2022-08-31
Last modified:2022-09-07
Method:ELECTRON MICROSCOPY (3.24 Å)
Cite:Specificity of TGF-beta 1 signal designated by LRRC33 and integrin alpha V beta 8.
Nat Commun, 13, 2022
7Y1R
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BU of 7y1r by Molmil
Human L-TGF-beta1 in complex with the anchor protein LRRC33
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-3)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Duan, Z, Zhang, Z.
Deposit date:2022-06-08
Release date:2022-08-31
Last modified:2022-09-07
Method:ELECTRON MICROSCOPY (4.01 Å)
Cite:Specificity of TGF-beta 1 signal designated by LRRC33 and integrin alpha V beta 8.
Nat Commun, 13, 2022
4JNA
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BU of 4jna by Molmil
Crystal structure of the DepH complex with dimethyl-FK228
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, DepH, ...
Authors:Li, J, Wang, C, Zhang, Z.M, Zhou, J.H, Cheng, E.
Deposit date:2013-03-14
Release date:2014-03-05
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2 Å)
Cite:The structural basis of an NADP+-independent dithiol oxidase in FK228 biosynthesis.
Sci Rep, 4, 2014
2OEH
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BU of 2oeh by Molmil
Determination of the Three-dimensional Structure of the Mrf2-DNA Complex Using Paramagnetic Spin Labeling
Descriptor: 5'-D(P*CP*GP*AP*CP*GP*TP*TP*AP*TP*AP*TP*TP*GP*T)-3', 5'-D(P*TP*AP*CP*AP*AP*TP*AP*TP*AP*AP*CP*GP*TP*CP*G)-3', AT-rich interactive domain-containing protein 5B
Authors:Cai, S, Zhu, L, Zhang, Z.
Deposit date:2006-12-29
Release date:2007-08-07
Last modified:2023-12-27
Method:SOLUTION NMR
Cite:Determination of the three-dimensional structure of the Mrf2-DNA complex using paramagnetic spin labeling.
Biochemistry, 46, 2007
3L72
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BU of 3l72 by Molmil
Chicken cytochrome BC1 complex with kresoxim-I-dimethyl bound
Descriptor: 1,2-dioleoyl-sn-glycero-3-phosphoethanolamine, CARDIOLIPIN, CYTOCHROME B, ...
Authors:Huang, L, Zhang, Z, Berry, E.A.
Deposit date:2009-12-27
Release date:2010-02-02
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (3.06 Å)
Cite:Famoxadone and related inhibitors bind like methoxy acrylate inhibitors in the Qo site of the BC1 compl and fix the rieske iron-sulfur protein in a positio close to but distinct from that seen with stigmatellin and other "DISTAL" Qo inhibitors.
To be Published
1LCY
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BU of 1lcy by Molmil
Crystal Structure of the Mitochondrial Serine Protease HtrA2
Descriptor: HtrA2 serine protease
Authors:Li, W, Srinivasula, S.M, Chai, J, Li, P, Wu, J.W, Zhang, Z, Alnemri, E.S, Shi, Y.
Deposit date:2002-04-07
Release date:2002-05-22
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural insights into the pro-apoptotic function of mitochondrial serine protease HtrA2/Omi.
Nat.Struct.Biol., 9, 2002

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