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PDB: 612 件

6JZM
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The intermediate forming O-C10 bond formation in AsqJ-catalyzed epoxidation
分子名称: (3~{R},3'~{S})-4-methyl-3'-phenyl-spiro[1~{H}-1,4-benzodiazepine-3,2'-oxirane]-2,5-dione, FE (III) ION, Iron/alpha-ketoglutarate-dependent dioxygenase asqJ, ...
著者Liao, H.J, Chan, N.L.
登録日2019-05-02
公開日2020-03-18
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (1.88 Å)
主引用文献The intermediate forming O-C10 bond formation in AsqJ-catalyzed epoxidation
J.Am.Chem.Soc., 2020
6KD9
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Binding pose 1 of 2-CF3 bound AsqJ complex
分子名称: (3~{Z})-4-methyl-3-[[4-(trifluoromethyl)phenyl]methylidene]-1~{H}-1,4-benzodiazepine-2,5-dione, FE (III) ION, Iron/alpha-ketoglutarate-dependent dioxygenase asqJ, ...
著者Liao, H.J, Chan, N.L.
登録日2019-07-01
公開日2020-03-18
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.44 Å)
主引用文献Binding pose 1 of 2-CF3 bound AsqJ complex
J.Am.Chem.Soc., 2020
6K30
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BU of 6k30 by Molmil
Binding pose 2 of 2-CF3 bound AsqJ complex
分子名称: (3~{Z})-4-methyl-3-[[4-(trifluoromethyl)phenyl]methylidene]-1~{H}-1,4-benzodiazepine-2,5-dione, FE (III) ION, Iron/alpha-ketoglutarate-dependent dioxygenase asqJ, ...
著者Liao, H.J, Chan, N.L.
登録日2019-05-15
公開日2020-03-18
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (2.684 Å)
主引用文献Binding pose 2 of 2-CF3 bound AsqJ complex
J.Am.Chem.Soc., 2020
6K0F
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The crystal structure of cyclopenin-bound AsqJ quinary complex
分子名称: (3~{R},3'~{S})-4-methyl-3'-phenyl-spiro[1~{H}-1,4-benzodiazepine-3,2'-oxirane]-2,5-dione, 2-OXOGLUTARIC ACID, FE (III) ION, ...
著者Liao, H.J, Chan, N.L.
登録日2019-05-06
公開日2020-03-18
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.634 Å)
主引用文献The crystal structure of cyclopenin-bound AsqJ quinary complex
J.Am.Chem.Soc., 2020
4CRI
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BU of 4cri by Molmil
Crystal Structure of 53BP1 tandem tudor domains in complex with methylated K810 Rb peptide
分子名称: RB1 PROTEIN, TUMOR SUPPRESSOR P53-BINDING PROTEIN 1
著者Krojer, T, Johansson, C, Gileadi, C, Fedorov, O, Carr, S, La Thangue, N.B, Vollmar, M, Crawley, L, von Delft, F, Bountra, C, Arrowsmith, C.H, Edwards, A, Oppermann, U.
登録日2014-02-26
公開日2014-08-06
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2.35 Å)
主引用文献Lysine Methylation-Dependent Binding of 53BP1 to the Prb Tumor Suppressor.
Proc.Natl.Acad.Sci.USA, 111, 2014
6DXK
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BU of 6dxk by Molmil
Glucocorticoid Receptor in complex with Compound 11
分子名称: (8S,11R,13S,14S,17S)-11-[4-(dimethylamino)phenyl]-17-(3,3-dimethylbut-1-yn-1-yl)-17-hydroxy-13-methyl-1,2,6,7,8,11,12,13,14,15,16,17-dodecahydro-3H-cyclopenta[a]phenanthren-3-one (non-preferred name), Glucocorticoid receptor
著者Rew, Y, Du, X, Eksterowicz, J, Zhou, H, Jahchan, N, Zhu, L, Yan, X, Kawai, H, McGee, L.R, Medina, J.C, Huang, T, Chen, C, Zavorotinskaya, T, Sutimantanapi, D, Waszczuk, J, Jackson, E, Huang, E, Ye, Q, Fantin, V.R, Daqing, S.
登録日2018-06-29
公開日2018-10-03
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (3.05 Å)
主引用文献Discovery of a Potent and Selective Steroidal Glucocorticoid Receptor Antagonist (ORIC-101).
J. Med. Chem., 61, 2018
5GWK
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Human topoisomerase IIalpha in complex with DNA and etoposide
分子名称: (5S,5aR,8aR,9R)-9-(4-hydroxy-3,5-dimethoxyphenyl)-8-oxo-5,5a,6,8,8a,9-hexahydrofuro[3',4':6,7]naphtho[2,3-d][1,3]dioxol -5-yl 4,6-O-[(1R)-ethylidene]-beta-D-glucopyranoside, DNA (5'-D(P*AP*GP*CP*CP*GP*AP*GP*C)-3'), DNA (5'-D(P*TP*GP*CP*AP*GP*CP*TP*CP*GP*GP*CP*T)-3'), ...
著者Wang, Y.R, Wu, C.C, Chan, N.L.
登録日2016-09-12
公開日2017-08-23
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (3.152 Å)
主引用文献Producing irreversible topoisomerase II-mediated DNA breaks by site-specific Pt(II)-methionine coordination chemistry
Nucleic Acids Res., 45, 2017
6L8Z
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BU of 6l8z by Molmil
Crystal structure of ugt transferase mutant in complex with UPG
分子名称: Glycosyltransferase, URIDINE-5'-DIPHOSPHATE-GLUCOSE
著者Li, J, Shan, N, Yang, J.G, Liu, W.D, Sun, Y.X.
登録日2019-11-07
公開日2020-04-01
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Efficient O-Glycosylation of Triterpenes Enabled by Protein Engineering of Plant Glycosyltransferase UGT74AC1
Acs Catalysis, 2020
5H02
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Crystal structure of Methanohalophilus portucalensis glycine sarcosine N-methyltransferase tetramutant (H21G, E23T, E24N, L28S)
分子名称: Glycine sarcosine N-methyltransferase, S-ADENOSYL-L-HOMOCYSTEINE, TRIMETHYL GLYCINE
著者Lee, Y.R, Lin, T.S, Lai, S.J, Liu, M.S, Lai, M.C, Chan, N.L.
登録日2016-10-02
公開日2016-11-23
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.776 Å)
主引用文献Structural Analysis of Glycine Sarcosine N-methyltransferase from Methanohalophilus portucalensis Reveals Mechanistic Insights into the Regulation of Methyltransferase Activity.
Sci Rep, 6, 2016
5CKS
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BU of 5cks by Molmil
DAHP (3-deoxy-D-arabinoheptulosonate-7-phosphate) Synthase in complex with DAHP Oxime.
分子名称: DAHP Oxime, Phospho-2-dehydro-3-deoxyheptonate aldolase, Phe-sensitive, ...
著者Berti, P, Junop, M, Balachandran, N.
登録日2015-07-15
公開日2016-08-10
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.1181 Å)
主引用文献Potent Inhibition of 3-Deoxy-d-arabinoheptulosonate-7-phosphate (DAHP) Synthase by DAHP Oxime, a Phosphate Group Mimic.
Biochemistry, 55, 2016
3RBT
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BU of 3rbt by Molmil
Crystal structure of glutathione S-transferase Omega 3 from the silkworm Bombyx mori
分子名称: GLYCEROL, Glutathione transferase o1
著者Chen, B.-Y, Ma, X.-X, Tan, X, Yang, J.-P, Zhang, N.-N, Li, W.-F, Chen, Y, Xia, Q, Zhou, C.-Z.
登録日2011-03-29
公開日2011-08-10
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structure-guided activity restoration of the silkworm glutathione transferase Omega GSTO3-3
J.Mol.Biol., 412, 2011
5GWJ
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BU of 5gwj by Molmil
Structure of a Human topoisomerase IIbeta fragment in complex with DNA and E7873S
分子名称: DNA (5'-D(P*AP*GP*CP*CP*GP*AP*GP*C)-3'), DNA (5'-D(P*TP*GP*CP*AP*GP*CP*TP*CP*GP*GP*CP*T)-3'), DNA topoisomerase 2-beta, ...
著者Wang, Y.R, Chen, S.F, Wu, C.C, Chan, N.L.
登録日2016-09-12
公開日2017-08-23
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.566 Å)
主引用文献Producing irreversible topoisomerase II-mediated DNA breaks by site-specific Pt(II)-methionine coordination chemistry
Nucleic Acids Res., 45, 2017
5GWX
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BU of 5gwx by Molmil
Crystal structure of glycine sarcosine N-methyltransferase from Methanohalophilus portucalensis in complex with S-adenosylmethionine and sarcosine
分子名称: 1,2-ETHANEDIOL, Glycine sarcosine N-methyltransferase, S-ADENOSYLMETHIONINE, ...
著者Lee, Y.R, Lin, T.S, Lai, S.J, Liu, M.S, Lai, M.C, Chan, N.L.
登録日2016-09-14
公開日2016-11-23
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.205 Å)
主引用文献Structural Analysis of Glycine Sarcosine N-methyltransferase from Methanohalophilus portucalensis Reveals Mechanistic Insights into the Regulation of Methyltransferase Activity.
Sci Rep, 6, 2016
5HIL
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BU of 5hil by Molmil
Crystal structure of glycine sarcosine N-methyltransferase from Methanohalophilus portucalensis in complex with S-adenosylhomocysteine and sarcosine
分子名称: 1,2-ETHANEDIOL, Glycine sarcosine N-methyltransferase, S-ADENOSYL-L-HOMOCYSTEINE, ...
著者Lee, Y.R, Lin, T.S, Lai, S.J, Liu, M.S, Lai, M.C, Chan, N.L.
登録日2016-01-12
公開日2016-11-23
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.471 Å)
主引用文献Structural Analysis of Glycine Sarcosine N-methyltransferase from Methanohalophilus portucalensis Reveals Mechanistic Insights into the Regulation of Methyltransferase Activity
Sci Rep, 6, 2016
6L8W
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BU of 6l8w by Molmil
Crystal structure of ugt transferase mutant2
分子名称: Glycosyltransferase
著者Li, J, Shan, N, Yang, J.G, Liu, W.D, Sun, Y.X.
登録日2019-11-07
公開日2020-04-01
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献Efficient O-Glycosylation of Triterpenes Enabled by Protein Engineering of Plant Glycosyltransferase UGT74AC1
Acs Catalysis, 2020
6L90
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Crystal structure of ugt transferase enzyme
分子名称: Glycosyltransferase, SULFATE ION
著者Li, J, Shan, N, Yang, J.G, Liu, W.D, Sun, Y.X.
登録日2019-11-07
公開日2020-04-01
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.02 Å)
主引用文献Efficient O-Glycosylation of Triterpenes Enabled by Protein Engineering of Plant Glycosyltransferase UGT74AC1
Acs Catalysis, 2020
1RHB
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BU of 1rhb by Molmil
WATER DEPENDENT DOMAIN MOTION AND FLEXIBILITY IN RIBONUCLEASE A AND THE INVARIANT FEATURES IN ITS HYDRATION SHELL. AN X-RAY STUDY OF TWO LOW HUMIDITY CRYSTAL FORMS OF THE ENZYME
分子名称: RIBONUCLEASE A
著者Radha Kishan, K.V, Chandra, N.R, Sudarsanakumar, C, Suguna, K, Vijayan, M.
登録日1994-11-13
公開日1995-02-27
最終更新日2024-06-05
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Water-dependent domain motion and flexibility in ribonuclease A and the invariant features in its hydration shell. An X-ray study of two low-humidity crystal forms of the enzyme.
Acta Crystallogr.,Sect.D, 51, 1995
1RHA
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BU of 1rha by Molmil
WATER DEPENDENT DOMAIN MOTION AND FLEXIBILITY IN RIBONUCLEASE A AND THE INVARIANT FEATURES IN ITS HYDRATION SHELL. AN X-RAY STUDY OF TWO LOW HUMIDITY CRYSTAL FORMS OF THE ENZYME
分子名称: RIBONUCLEASE A
著者Radha Kishan, K.V, Chandra, N.R, Sudarsanakumar, C, Suguna, K, Vijayan, M.
登録日1994-11-13
公開日1995-02-27
最終更新日2024-06-05
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Water-dependent domain motion and flexibility in ribonuclease A and the invariant features in its hydration shell. An X-ray study of two low-humidity crystal forms of the enzyme.
Acta Crystallogr.,Sect.D, 51, 1995
6L8X
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Crystal structure of Siraitia grosvenorii ugt transferase mutant2
分子名称: Glycosyltransferase
著者Li, J, Shan, N, Yang, J.G, Liu, W.D, Sun, Y.X.
登録日2019-11-07
公開日2020-04-08
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献Efficient O-Glycosylation of Triterpenes Enabled by Protein Engineering of Plant Glycosyltransferase UGT74AC1
Acs Catalysis, 10, 2020
5HIK
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BU of 5hik by Molmil
Crystal structure of glycine sarcosine N-methyltransferase from Methanohalophilus portucalensis in complex with S-adenosylmethionine
分子名称: 1,2-ETHANEDIOL, Glycine sarcosine N-methyltransferase, S-ADENOSYLMETHIONINE
著者Lee, Y.R, Lin, T.S, Lai, S.J, Liu, M.S, Lai, M.C, Chan, N.L.
登録日2016-01-12
公開日2016-11-23
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.354 Å)
主引用文献Structural Analysis of Glycine Sarcosine N-methyltransferase from Methanohalophilus portucalensis Reveals Mechanistic Insights into the Regulation of Methyltransferase Activity
Sci Rep, 6, 2016
5HIJ
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BU of 5hij by Molmil
Crystal structure of glycine sarcosine N-methyltransferase from Methanohalophilus portucalensis in complex with betaine
分子名称: Glycine sarcosine N-methyltransferase, TRIMETHYL GLYCINE
著者Lee, Y.R, Lin, T.S, Lai, S.J, Liu, M.S, Lai, M.C, Chan, N.L.
登録日2016-01-12
公開日2016-11-23
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.93 Å)
主引用文献Structural Analysis of Glycine Sarcosine N-methyltransferase from Methanohalophilus portucalensis Reveals Mechanistic Insights into the Regulation of Methyltransferase Activity
Sci Rep, 6, 2016
5HII
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Crystal structure of glycine sarcosine N-methyltransferase (GSMT) from Methanohalophilus portucalensis (apo form)
分子名称: 1,2-ETHANEDIOL, Glycine sarcosine N-methyltransferase
著者Lee, Y.R, Lin, T.S, Lai, S.J, Liu, M.S, Lai, M.C, Chan, N.L.
登録日2016-01-12
公開日2016-11-23
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structural Analysis of Glycine Sarcosine N-methyltransferase from Methanohalophilus portucalensis Reveals Mechanistic Insights into the Regulation of Methyltransferase Activity
Sci Rep, 6, 2016
5EUI
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BU of 5eui by Molmil
Structure of predicted ancestral pika hemoglobin
分子名称: HBA protein, HBB protein, PROTOPORPHYRIN IX CONTAINING FE
著者Inoguchi, N, Chandrasekhar, N, Storz, J.F, Moriyama, H.
登録日2015-11-18
公開日2016-11-30
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.45 Å)
主引用文献structure of predicted pika ancestral hemoglobin at 1.45 Angstroms resolution.
To Be Published
6DJA
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BU of 6dja by Molmil
ZN-DEPENDENT 5/B/6 METALLO-BETA-LACTAMASE FROM BACILLUS CEREUS
分子名称: Metallo-beta-lactamase type 2, ZINC ION
著者Bui, A.A, Khan, N.H, Shaw, R.W, Sutton, R.B.
登録日2018-05-24
公開日2019-05-29
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.48 Å)
主引用文献A DNA aptamer reveals an allosteric site for inhibition in metallo-beta-lactamases.
Plos One, 14, 2019
6M05
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BU of 6m05 by Molmil
Trimolecular G-quadruplex
分子名称: DNA (5'-D(*GP*TP*TP*AP*GP*G)-3')
著者Jing, H.T, Fu, W.Q, Zhang, N.
登録日2020-02-20
公開日2021-01-20
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献NMR structural study on the self-trimerization of d(GTTAGG) into a dynamic trimolecular G-quadruplex assembly preferentially in Na+ solution with a moderate K+ tolerance.
Nucleic Acids Res., 49, 2021

222036

件を2024-07-03に公開中

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