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PDB: 679 results

6HD3
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BU of 6hd3 by Molmil
Common mode of remodeling AAA ATPases p97/CDC48 by their disassembly cofactors ASPL/PUX1
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Cell division control protein 48 homolog A, PHOSPHATE ION
Authors:Heinemann, U, Roske, Y, Banchenko, S, Arumughan, A, Petrovic, S.
Deposit date:2018-08-17
Release date:2019-08-28
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Common Mode of Remodeling AAA ATPases p97/CDC48 by Their Disassembling Cofactors ASPL/PUX1.
Structure, 27, 2019
1PVU
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BU of 1pvu by Molmil
THE CRYSTAL STRUCTURE OF PVUII ENDONUCLEASE REVEALS EXTENSIVE STRUCTURAL HOMOLOGIES TO ECORV
Descriptor: Pvu II
Authors:Vlassi, M, Athanasiadis, A.
Deposit date:1995-03-09
Release date:1995-03-31
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal structure of PvuII endonuclease reveals extensive structural homologies to EcoRV.
Nat.Struct.Biol., 1, 1994
3I6N
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BU of 3i6n by Molmil
Mode of Binding of the Tuberculosis Prodrug Isoniazid to Peroxidases: Crystal Structure of Bovine Lactoperoxidase with Isoniazid at 2.7 Resolution
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 4-(DIAZENYLCARBONYL)PYRIDINE, CALCIUM ION, ...
Authors:Singh, A.K, Kumar, R.P, Pandey, N, Singh, N, Sinha, M, Bhushan, A, Kaur, P, Sharma, S, Singh, T.P.
Deposit date:2009-07-07
Release date:2009-10-13
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Mode of binding of the tuberculosis prodrug isoniazid to heme peroxidases: binding studies and crystal structure of bovine lactoperoxidase with isoniazid at 2.7 A resolution.
J.Biol.Chem., 285, 2010
2R2K
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BU of 2r2k by Molmil
Crystal structure of the complex of camel peptidoglycan recognition protein with disaccharide at 3.2A resolution
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, L(+)-TARTARIC ACID, Peptidoglycan recognition protein
Authors:Sharma, P, Jain, R, Singh, N, Sharma, S, Bhushan, A, Kaur, P, Singh, T.P.
Deposit date:2007-08-26
Release date:2007-09-18
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (3.25 Å)
Cite:Crystal structure of the complex of camel peptidoglycan recognition protein with disaccharide at 3.2A resolution
To be Published
2Q8J
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BU of 2q8j by Molmil
Crystal Structure of the complex of C-lobe of bovine lactoferrin with Mannitol and Mannose at 2.7 A resolution
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CARBONATE ION, ...
Authors:Mir, R, Jain, R, Sinha, M, Singh, N, Sharma, S, Kaur, P, Bhushan, A, Singh, T.P.
Deposit date:2007-06-11
Release date:2007-06-19
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.71 Å)
Cite:Crystal structure of the complex of C-lobe of bovine lactoferrin with Mannitol and Mannose at 2.7 A resolution
To be Published
2O8D
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BU of 2o8d by Molmil
human MutSalpha (MSH2/MSH6) bound to ADP and a G dU mispair
Descriptor: 5'-D(*CP*CP*TP*AP*GP*CP*GP*(DU)P*GP*CP*GP*GP*TP*TP*C)-3', 5'-D(*GP*AP*AP*CP*CP*GP*CP*GP*CP*GP*CP*TP*AP*GP*G)-3', ADENOSINE-5'-DIPHOSPHATE, ...
Authors:Warren, J.J, Pohlhaus, T.J, Changela, A, Modrich, P.L, Beese, L.S.
Deposit date:2006-12-12
Release date:2007-06-05
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (3 Å)
Cite:Structure of the Human MutSalpha DNA Lesion Recognition Complex.
Mol.Cell, 26, 2007
2OLH
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BU of 2olh by Molmil
Crystal structure of a signalling protein (SPG-40) complex with cellobiose at 2.78 A resolution
Descriptor: Chitinase-3-like protein 1, alpha-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, beta-D-glucopyranose-(1-4)-beta-D-glucopyranose
Authors:Sharma, P, Singh, N, Sharma, S, Bhushan, A, Kaur, P, Singh, T.P.
Deposit date:2007-01-19
Release date:2007-02-13
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.78 Å)
Cite:Crystal structure of a signalling protein (SPG-40) complex with cellobiose at 2.78 A resolution
To be Published
2MP2
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BU of 2mp2 by Molmil
Solution structure of SUMO dimer in complex with SIM2-3 from RNF4
Descriptor: E3 ubiquitin-protein ligase RNF4, Small ubiquitin-related modifier 3
Authors:Xu, Y, Plechanovov, A, Simpson, P, Marchant, J, Leidecker, O, Sebastian, K, Hay, R.T, Matthews, S.J.
Deposit date:2014-05-09
Release date:2014-07-02
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Structural insight into SUMO chain recognition and manipulation by the ubiquitin ligase RNF4.
Nat Commun, 5, 2014
7L6D
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BU of 7l6d by Molmil
Crystal structure of the second bromodomain (BD2) of human BRD2 bound to bromosporine
Descriptor: 1,2-ETHANEDIOL, Bromodomain-containing protein 2, Bromosporine, ...
Authors:Karim, M.R, Bikowitz, M.J, Chan, A, Schonbrunn, E.
Deposit date:2020-12-23
Release date:2021-06-23
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Differential BET Bromodomain Inhibition by Dihydropteridinone and Pyrimidodiazepinone Kinase Inhibitors.
J.Med.Chem., 64, 2021
3E64
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BU of 3e64 by Molmil
Fragment based discovery of JAK-2 inhibitors
Descriptor: 4-(3-amino-1H-indazol-5-yl)-N-tert-butylbenzenesulfonamide, Tyrosine-protein kinase JAK2
Authors:Antonysamy, S, Fang, W, Hirst, G, Park, F, Russell, M, Smyth, L, Sprengeler, P, Stappenbeck, F, Steensma, R, Thompson, D.A, Wilson, M, Wong, M, Zhang, A, Zhang, F.
Deposit date:2008-08-14
Release date:2008-10-14
Last modified:2012-02-08
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Fragment-based discovery of JAK-2 inhibitors.
Bioorg.Med.Chem.Lett., 19, 2009
4I5I
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BU of 4i5i by Molmil
Crystal structure of the SIRT1 catalytic domain bound to NAD and an EX527 analog
Descriptor: (6S)-2-chloro-5,6,7,8,9,10-hexahydrocyclohepta[b]indole-6-carboxamide, NAD-dependent protein deacetylase sirtuin-1, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, ...
Authors:Zhao, X, Allison, D, Condon, B, Zhang, F, Gheyi, T, Zhang, A, Ashok, S, Russell, M, Macewan, I, Qian, Y, Jamison, J.A, Luz, J.G.
Deposit date:2012-11-28
Release date:2013-01-23
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:The 2.5 angstrom crystal structure of the SIRT1 catalytic domain bound to nicotinamide adenine dinucleotide (NAD+) and an indole (EX527 analogue) reveals a novel mechanism of histone deacetylase inhibition.
J.Med.Chem., 56, 2013
2A1W
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BU of 2a1w by Molmil
Anti-cocaine antibody 7.5.21, crystal form I
Descriptor: SULFATE ION, immunoglobulin heavy chain, immunoglobulin light chain kappa
Authors:Pozharski, E, Hewagama, A, Shanafelt, A, Ringe, D, Petsko, G.A.
Deposit date:2005-06-21
Release date:2005-06-28
Last modified:2017-10-11
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Flexibility Of Packing: Four Crystal Forms Of An Anti-Cocaine Antibody 7.5.21
To be Published
2XKQ
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BU of 2xkq by Molmil
Crystal structure of Streptococcus suis Dpr with manganese
Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, CALCIUM ION, CHLORIDE ION, ...
Authors:Haikarainen, T, Thanassoulas, A, Stavros, P, Nounesis, G, Haataja, S, Papageorgiou, A.C.
Deposit date:2010-07-12
Release date:2010-11-24
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structural and Thermodynamic Characterization of Metal Ion Binding in Streptococcus Suis Dpr.
J.Mol.Biol., 405, 2011
2CEJ
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BU of 2cej by Molmil
P1' Extended HIV-1 Protease Inhibitors Encompassing a Tertiary Alcohol in the Transition-State Mimicking Scaffold
Descriptor: 3-AMINO-3-BENZYL-[4.3.0]BICYCLO-1,6-DIAZANONAN-2-ONE, POL PROTEIN
Authors:Ginman, N, Ekegren, J.K, Johansson, A, Wallberg, H, Larhed, M, Samuelsson, B, Hallberg, A, Unge, T.
Deposit date:2006-02-07
Release date:2007-02-13
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Microwave-Accelerated Synthesis of P1'-Extended HIV-1 Protease Inhibitors Encompassing a Tertiary Alcohol in the Transition-State Mimicking Scaffold
J.Med.Chem., 49, 2006
1OWQ
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BU of 1owq by Molmil
Crystal structure of a 40 kDa signalling protein (SPC-40) secreted during involution
Descriptor: 2-acetamido-2-deoxy-alpha-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, signal processing protein
Authors:Kumar, J, Sharma, S, Jasti, J, Bhushan, A, Singh, T.P.
Deposit date:2003-03-29
Release date:2004-05-18
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of a 40 kDa signalling protein (SPC-40) secreted during involution
To be Published
3CXA
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BU of 3cxa by Molmil
Crystal structure of the complex of peptidoglycan recognition protein with alpha-D-glucopyranosyl alpha-D-glucopyranoside at 3.4 A resolution
Descriptor: L(+)-TARTARIC ACID, Peptidoglycan recognition protein, alpha-D-glucopyranose-(1-1)-alpha-D-glucopyranose
Authors:Balaji, K, Sharma, P, Singh, N, Sinha, M, Bhushan, A, Kaur, P, Sharma, S, Singh, T.P.
Deposit date:2008-04-24
Release date:2008-05-20
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (3.4 Å)
Cite:Crystal structure of the complex of peptidoglycan recognition protein with alpha-D-glucopyranosyl alpha-D-glucopyranoside at 3.4 A resolution
To be Published
4BKG
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BU of 4bkg by Molmil
crystal structure of human diSUMO-2
Descriptor: SMALL UBIQUITIN-RELATED MODIFIER 2
Authors:Keusekotten, K, Bade, V.N, Meyer-Teschendorf, K, Sriramachandran, A, Fischer-Schrader, K, Krause, A, Horst, C, Hofmann, K, Dohmen, R.J, Praefcke, G.J.K.
Deposit date:2013-04-25
Release date:2013-11-06
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.11 Å)
Cite:Multivalent Interactions of the Sumo-Interaction Motifs in the Ring-Finger Protein 4 (Rnf4) Determine the Specificity for Chains of the Small Ubiquitin-Related Modifier (Sumo).
Biochem.J., 457, 2014
2A77
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BU of 2a77 by Molmil
Anti-Cocaine Antibody 7.5.21, Crystal Form II
Descriptor: GLYCEROL, Immunoglobulin Heavy Chain, Immunoglobulin Light Chain, ...
Authors:Pozharski, E, Hewagama, A, Shanafelt, A, Ringe, D, Petsko, G.A.
Deposit date:2005-07-04
Release date:2005-07-12
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Flexibility of Packing: Four Crystal Forms of an Anti-Cocaine Antibody 7.5.21
To be Published
1Z58
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BU of 1z58 by Molmil
Crystal structure of a complex of the ribosome large subunit with rapamycin
Descriptor: 23S RIBOSOMAL RNA, RAPAMYCIN IMMUNOSUPPRESSANT DRUG
Authors:Amit, M, Berisio, R, Baram, D, Harms, J, Bashan, A, Yonath, A.
Deposit date:2005-03-17
Release date:2005-06-28
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (3.8 Å)
Cite:A crevice adjoining the ribosome tunnel: Hints for cotranslational folding.
Febs Lett., 579, 2005
2AAR
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BU of 2aar by Molmil
Structure of trigger factor binding domain in biologically homologous complex with eubacterial ribosome.
Descriptor: 23S ribosomal RNA, 50S ribosomal protein L23, 50S ribosomal protein L29, ...
Authors:Baram, D, Pyetan, E, Sittner, A, Auerbach-Nevo, T, Bashan, A, Yonath, A.
Deposit date:2005-07-14
Release date:2005-08-23
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (3.5 Å)
Cite:Structure of trigger factor binding domain in biologically homologous complex with eubacterial ribosome reveals its chaperone action
Proc.Natl.Acad.Sci.Usa, 102, 2005
4BNF
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BU of 4bnf by Molmil
Crystal structure of S. aureus FabI in complex with NADP and 2- phenoxy-5-propylphenol
Descriptor: 2-phenoxy-5-propyl-phenol, ENOYL-[ACYL-CARRIER-PROTEIN] REDUCTASE [NADPH], GLUTAMIC ACID, ...
Authors:Schiebel, J, Chang, A, Bommineni, G.R, Tonge, P.J, Kisker, C.
Deposit date:2013-05-15
Release date:2013-06-05
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Rational Optimization of Drug-Target Residence Time: Insights from Inhibitor Binding to the S. Aureus Fabi Enzyme-Product Complex.
Biochemistry, 52, 2013
4BNM
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BU of 4bnm by Molmil
Crystal structure of S. aureus FabI in complex with NADP and 5-hexyl- 2-(2-methylphenoxy)phenol
Descriptor: 5-HEXYL-2-(2-METHYLPHENOXY)PHENOL, ENOYL-[ACYL-CARRIER-PROTEIN] REDUCTASE [NADPH], GLUTAMIC ACID, ...
Authors:Schiebel, J, Chang, A, Bommineni, G.R, Tonge, P.J, Kisker, C.
Deposit date:2013-05-15
Release date:2013-06-05
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Rational Optimization of Drug-Target Residence Time: Insights from Inhibitor Binding to the S. Aureus Fabi Enzyme-Product Complex.
Biochemistry, 52, 2013
4BNK
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BU of 4bnk by Molmil
Crystal structure of S. aureus FabI in complex with NADP and 5-fluoro- 2-phenoxyphenol
Descriptor: 5-fluoro-2-phenoxyphenol, CHLORIDE ION, ENOYL-[ACYL-CARRIER-PROTEIN] REDUCTASE [NADPH], ...
Authors:Schiebel, J, Chang, A, Bommineni, G.R, Tonge, P.J, Kisker, C.
Deposit date:2013-05-15
Release date:2013-06-05
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Rational Optimization of Drug-Target Residence Time: Insights from Inhibitor Binding to the S. Aureus Fabi Enzyme-Product Complex.
Biochemistry, 52, 2013
4BNI
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BU of 4bni by Molmil
Crystal structure of S. aureus FabI in complex with NADP and 2-(2- aminophenoxy)-5-hexylphenol
Descriptor: 2-(2-azanylphenoxy)-5-hexyl-phenol, ENOYL-[ACYL-CARRIER-PROTEIN] REDUCTASE [NADPH], GLUTAMIC ACID, ...
Authors:Schiebel, J, Chang, A, Bommineni, G.R, Tonge, P.J, Kisker, C.
Deposit date:2013-05-15
Release date:2013-06-05
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Rational Optimization of Drug-Target Residence Time: Insights from Inhibitor Binding to the S. Aureus Fabi Enzyme-Product Complex.
Biochemistry, 52, 2013
2XJM
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BU of 2xjm by Molmil
Crystal structure of Streptococcus suis Dpr with cobalt
Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, CALCIUM ION, CHLORIDE ION, ...
Authors:Haikarainen, T, Thanassoulas, A, Stavros, P, Nounesis, G, Haataja, S, Papageorgiou, A.C.
Deposit date:2010-07-06
Release date:2010-11-24
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural and Thermodynamic Characterization of Metal Ion Binding in Streptococcus Suis Dpr.
J.Mol.Biol., 405, 2011

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