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PDB: 1387 results

1Q0Y
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BU of 1q0y by Molmil
Anti-Morphine Antibody 9B1 Complexed with Morphine
Descriptor: (7R,7AS,12BS)-3-METHYL-2,3,4,4A,7,7A-HEXAHYDRO-1H-4,12-METHANO[1]BENZOFURO[3,2-E]ISOQUINOLINE-7,9-DIOL, Fab 9B1, Heavy chain, ...
Authors:Pozharski, E, Wilson, M.A, Hewagama, A, Shanafelt, A.B, Petsko, G, Ringe, D.
Deposit date:2003-07-17
Release date:2004-04-20
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2 Å)
Cite:Anchoring a cationic ligand: the structure of the Fab fragment of the anti-morphine antibody 9B1 and its complex with morphine
J.Mol.Biol., 337, 2004
2OTF
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BU of 2otf by Molmil
Crystal structure of the complex formed between phospholipase A2 and atenolol at 1.95 A resolution
Descriptor: 2-(4-(2-HYDROXY-3-(ISOPROPYLAMINO)PROPOXY)PHENYL)ETHANAMIDE, Phospholipase A2 VRV-PL-VIIIa
Authors:Kumar, S, Singh, N, Sharma, S, Bhushan, A, Kaur, P, Singh, T.P.
Deposit date:2007-02-08
Release date:2007-02-20
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Crystal structure of the complex formed between phospholipase A2 and atenolol at 1.95 A resolution
To be Published
2M18
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BU of 2m18 by Molmil
Structure of stacked G-quadruplex formed by human TERRA sequence in potassium solution
Descriptor: RNA (5'-R(*GP*GP*GP*UP*UP*AP*GP*GP*GP*U)-3')
Authors:Martadinata, H, Phan, A.T.
Deposit date:2012-11-20
Release date:2013-04-17
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Structure of Human Telomeric RNA (TERRA): Stacking of Two G-Quadruplex Blocks in K(+) Solution
Biochemistry, 52, 2013
2M4P
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BU of 2m4p by Molmil
Solution structure of an intramolecular propeller-type G-quadruplex containing a single bulge
Descriptor: DNA (5'-D(*TP*TP*GP*TP*GP*GP*TP*GP*GP*GP*TP*GP*GP*GP*TP*GP*GP*GP*T)-3')
Authors:Mukundan, V.T, Phan, A.T.
Deposit date:2013-02-08
Release date:2013-06-19
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Bulges in G-Quadruplexes: Broadening the Definition of G-Quadruplex-Forming Sequences.
J.Am.Chem.Soc., 135, 2013
4GLB
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BU of 4glb by Molmil
Structure of p-nitrobenzaldehyde inhibited lipase from Thermomyces lanuginosa at 2.69 A resolution
Descriptor: 4-nitrobenzaldehyde, GLYCEROL, Lipase
Authors:Kumar, M, Sinha, M, Mukherjee, J, Gupta, M.N, Bhushan, A, Kaur, P, Sharma, S, Singh, T.P.
Deposit date:2012-08-14
Release date:2012-09-05
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.69 Å)
Cite:Structure of p-nitrobenzaldehyde inhibited lipase from Thermomyces lanuginosa at 2.69 A resolution
TO BE PUBLISHED
3GI9
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BU of 3gi9 by Molmil
Crystal Structure of ApcT Transporter Bound to 7F11 Monoclonal Fab Fragment
Descriptor: 7F11 Anti-ApcT Monoclonal Fab Heavy Chain, 7F11 Anti-ApcT Monoclonal Fab Light Chain, Uncharacterized protein MJ0609
Authors:Shaffer, P.L, Goehring, A.S, Shankaranarayanan, A, Gouaux, E, New York Consortium on Membrane Protein Structure (NYCOMPS)
Deposit date:2009-03-05
Release date:2009-08-18
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (2.48 Å)
Cite:Structure and mechanism of a na+-independent amino Acid transporter.
Science, 325, 2009
1NKX
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BU of 1nkx by Molmil
CRYSTAL STRUCTURE OF A PROTEOLYTICALLY GENERATED FUNCTIONAL MONOFERRIC C-LOBE OF BOVINE LACTOFERRIN AT 1.9A RESOLUTION
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, CARBONATE ION, FE (III) ION, ...
Authors:Sharma, S, Jasti, J, Kumar, J, Mohanty, A.K, Singh, T.P.
Deposit date:2003-01-06
Release date:2003-09-02
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal Structure of a Proteolytically Generated Functional Monoferric C-lobe of Bovine Lactoferrin at 1.9A Resolution
J.Mol.Biol., 331, 2003
2JSQ
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BU of 2jsq by Molmil
Monomeric Human Telomere DNA Tetraplex with 3+1 Strand Fold Topology, Two Edgewise Loops and Double-Chain Reversal Loop, Form 2 15BrG, NMR, 10 Structures
Descriptor: HUMAN TELOMERE DNA
Authors:Kuryavyi, V.V, Phan, A.T, Luu, K.N, Patel, D.J.
Deposit date:2007-07-11
Release date:2008-07-15
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Structure of two intramolecular G-quadruplexes formed by natural human telomere sequences in K+ solution.
Nucleic Acids Res., 35, 2007
6AH9
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BU of 6ah9 by Molmil
Crystal structure of enoyl-ACP reductase from Acinetobacter baumannii in complex with NAD and Triclosan
Descriptor: Enoyl-[acyl-carrier-protein] reductase [NADH], NICOTINAMIDE-ADENINE-DINUCLEOTIDE, TRICLOSAN
Authors:Rani, S.T, Nataraj, V, Laxminarasimhan, A, Thomas, A, Krishnamurthy, N.
Deposit date:2018-08-17
Release date:2019-08-21
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.74 Å)
Cite:Crystal structure of enoyl-ACP reductase from Acinetobacter baumannii in complex with NAD and Triclosan
To Be Published
1Q72
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BU of 1q72 by Molmil
Anti-Cocaine Antibody M82G2 Complexed with Cocaine
Descriptor: COCAINE, Fab M82G2, Heavy chain, ...
Authors:Pozharski, E, Moulin, A, Hewagama, A, Shanafelt, A.B, Petsko, G.A, Ringe, D.
Deposit date:2003-08-15
Release date:2003-08-26
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Diversity in hapten recognition: structural study of an anti-cocaine antibody M82G2.
J.Mol.Biol., 349, 2005
1CY7
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BU of 1cy7 by Molmil
COMPLEX OF E.COLI DNA TOPOISOMERASE I WITH 5'-THYMIDINE MONOPHOSPHATE
Descriptor: DNA TOPOISOMERASE I, PHOSPHATE ION, THYMIDINE-5'-PHOSPHATE
Authors:Feinberg, H, Changela, A, Mondragon, A.
Deposit date:1999-08-31
Release date:2000-03-08
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Protein-nucleotide interactions in E. coli DNA topoisomerase I.
Nat.Struct.Biol., 6, 1999
3ERH
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BU of 3erh by Molmil
First structural evidence of substrate specificity in mammalian peroxidases: Crystal structures of substrate complexes with lactoperoxidases from two different species
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, IODIDE ION, ...
Authors:Sheikh, I.A, Singh, N, Singh, A.K, Sinha, M, Singh, S.B, Bhushan, A, Kaur, P, Srinivasan, A, Sharma, S, Singh, T.P.
Deposit date:2008-10-02
Release date:2009-03-31
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structural Evidence of Substrate Specificity in Mammalian Peroxidases: STRUCTURE OF THE THIOCYANATE COMPLEX WITH LACTOPEROXIDASE AND ITS INTERACTIONS AT 2.4 A RESOLUTION
J.Biol.Chem., 284, 2009
1H56
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BU of 1h56 by Molmil
Structural and biochemical characterization of a new magnesium ion binding site near Tyr94 in the restriction endonuclease PvuII
Descriptor: MAGNESIUM ION, TYPE II RESTRICTION ENZYME PVUII
Authors:Spyrida, A, Matzen, C, Lanio, T, Jeltsch, A, Simoncsits, A, Athanasiadis, A, Scheuring-Vanamee, E, Kokkinidis, M, Pingoud, A.
Deposit date:2001-05-20
Release date:2003-08-07
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (3 Å)
Cite:Structural and Biochemical Characterization of a New Mg(2+) Binding Site Near Tyr94 in the Restriction Endonuclease PvuII.
J.Mol.Biol., 331, 2003
1PVU
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BU of 1pvu by Molmil
THE CRYSTAL STRUCTURE OF PVUII ENDONUCLEASE REVEALS EXTENSIVE STRUCTURAL HOMOLOGIES TO ECORV
Descriptor: Pvu II
Authors:Vlassi, M, Athanasiadis, A.
Deposit date:1995-03-09
Release date:1995-03-31
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal structure of PvuII endonuclease reveals extensive structural homologies to EcoRV.
Nat.Struct.Biol., 1, 1994
2LLJ
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BU of 2llj by Molmil
Structure of a bis-naphthalene bound to a thymine-thymine DNA mismatch
Descriptor: 6,22-dioxa-3,9,19,25-tetraazoniapentacyclo[25.5.3.3~11,17~.0~14,37~.0~30,34~]octatriaconta-1(33),11(38),12,14(37),15,17(36),27,29,31,34-decaene, DNA (5'-D(*CP*GP*TP*CP*GP*TP*AP*GP*TP*GP*C)-3'), DNA (5'-D(*GP*CP*AP*CP*TP*TP*CP*GP*AP*CP*G)-3')
Authors:Jourdan, M, Granzhan, A, Guillot, R, Dumy, P, Teulade-Fichou, M.
Deposit date:2011-11-10
Release date:2013-02-20
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Double threading through DNA: NMR structural study of a bis-naphthalene macrocycle bound to a thymine-thymine mismatch.
Nucleic Acids Res., 40, 2012
3OSH
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BU of 3osh by Molmil
Crystal Structure of The Complex of Group 1 Phospholipase A2 With Atropin At 1.5 A Resolution
Descriptor: (1R,5S)-8-METHYL-8-AZABICYCLO[3.2.1]OCT-3-YL (2R)-3-HYDROXY-2-PHENYLPROPANOATE, CALCIUM ION, Phospholipase A2 isoform 3
Authors:Shukla, P.K, Kaushik, S, Sinha, M, Bhushan, A, Kaur, P, Sharma, S, Singh, T.P.
Deposit date:2010-09-09
Release date:2010-11-17
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Crystal Structure of The Complex of Group 1 Phospholipase A2 With Atropin At 1.5 A Resolution
To be Published
3GCI
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BU of 3gci by Molmil
Crystal Structure of the Complex Formed Between a New Isoform of Phospholipase A2 with C-terminal Amyloid Beta Heptapeptide at 2 A Resolution
Descriptor: CALCIUM ION, Heptapeptide from Amyloid beta A4 protein, Phospholipase A2 isoform 3
Authors:Mirza, Z, Vikram, G, Singh, N, Sinha, M, Bhushan, A, Sharma, S, Srinivasan, A, Kaur, P, Singh, T.P.
Deposit date:2009-02-22
Release date:2009-03-10
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.04 Å)
Cite:Crystal Structure of the Complex Formed Between a New Isoform of Phospholipase A2 with C-terminal Amyloid Beta Heptapeptide at 2 A Resolution
To be Published
2KM3
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BU of 2km3 by Molmil
Structure of an intramolecular G-quadruplex containing a G.C.G.C tetrad formed by human telomeric variant CTAGGG repeats
Descriptor: DNA (5'-D(*AP*GP*GP*GP*CP*TP*AP*GP*GP*GP*CP*TP*AP*GP*GP*GP*CP*TP*AP*GP*GP*G)-3')
Authors:Lim, K.W, Alberti, P, Guedin, A, Lacroix, L, Riou, J.F, Royle, N.J, Mergny, J.L, Phan, A.T.
Deposit date:2009-07-17
Release date:2009-11-03
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Sequence variant (CTAGGG)n in the human telomere favors a G-quadruplex structure containing a G.C.G.C tetrad
Nucleic Acids Res., 37, 2009
3GCL
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BU of 3gcl by Molmil
Mode of ligand binding and assignment of subsites in mammalian peroxidases: crystal structure of lactoperoxidase complexes with acetyl salycylic acid, salicylhydroxamic acid and benzylhydroxamic acid
Descriptor: 2-(ACETYLOXY)BENZOIC ACID, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, ...
Authors:Singh, A.K, Singh, N, Sinha, M, Bhushan, A, Kaur, P, Sharma, S, Singh, T.P.
Deposit date:2009-02-22
Release date:2009-03-31
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Binding modes of aromatic ligands to mammalian heme peroxidases with associated functional implications: crystal structures of lactoperoxidase complexes with acetylsalicylic acid, salicylhydroxamic acid, and benzylhydroxamic acid
J.Biol.Chem., 284, 2009
2KYO
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BU of 2kyo by Molmil
Dimeric human ckit-2 proto-oncogene promoter quadruplex DNA NMR, 10 structures
Descriptor: 5'-D(*CP*GP*GP*GP*CP*GP*GP*GP*CP*GP*CP*GP*AP*GP*GP*GP*AP*GP*GP*GP*T)-3'
Authors:Kuryavyi, V, Phan, A.T, Patel, D.J.
Deposit date:2010-06-05
Release date:2010-06-30
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Solution structures of all parallel-stranded monomeric and dimeric G-quadruplex scaffolds of the human c-kit2 promoter.
Nucleic Acids Res., 38, 2010
4I1K
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BU of 4i1k by Molmil
Crystal Structure of VRN1 (Residues 208-341)
Descriptor: B3 domain-containing transcription factor VRN1, CHLORIDE ION
Authors:King, G, Chanson, A.H, McCallum, E.J, Ohme-Takagi, M, Byriel, K, Hill, J.M, Martin, J.L, Mylne, J.S.
Deposit date:2012-11-21
Release date:2012-12-19
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:The Arabidopsis B3 Domain Protein VERNALIZATION1 (VRN1) Is Involved in Processes Essential for Development, with Structural and Mutational Studies Revealing Its DNA-binding Surface.
J.Biol.Chem., 288, 2013
4HSD
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BU of 4hsd by Molmil
Crystal structure of a new form of plant lectin from Cicer arietinum at 2.45 Angstrom resolution
Descriptor: Lectin, SODIUM ION
Authors:Kumar, S, Singh, A, Bhushan, A, Dey, S, Sharma, S, Singh, T.P.
Deposit date:2012-10-30
Release date:2012-11-14
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:Crystal structure of a new form of plant lectin from Cicer arietinum at 2.45 Angstrom resolution
to be published
2GKU
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BU of 2gku by Molmil
Monomeric human telomere DNA tetraplex with 3+1 strand fold topology, two edgewise loops and double-chain reversal loop, NMR, 12 structures
Descriptor: Human telomere DNA
Authors:Luu, K.N, Phan, A.T, Kuryavyi, V.V, Lacroix, L, Patel, D.J.
Deposit date:2006-04-03
Release date:2006-08-15
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Structure of the human telomere in k(+) solution: an intramolecular (3 + 1) g-quadruplex scaffold.
J.Am.Chem.Soc., 128, 2006
2N4Y
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BU of 2n4y by Molmil
Structure and possible function of a G-quadruplex in the long terminal repeat of the proviral HIV-1 genome
Descriptor: DNA_(5'-D(*CP*TP*GP*GP*GP*CP*GP*GP*GP*AP*CP*TP*GP*GP*GP*GP*AP*GP*TP*GP*GP*T)-3')
Authors:DeNicola, B, Lech, C.J, Heddi, B, Regmi, S, Frasson, I, Perrone, R, Richter, S.N, Phan, A.T.
Deposit date:2015-07-02
Release date:2016-06-29
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Structure and possible function of a G-quadruplex in the long terminal repeat of the proviral HIV-1 genome.
Nucleic Acids Res., 44, 2016
2MS9
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BU of 2ms9 by Molmil
Solution structure of a G-quadruplex
Descriptor: DNA (28-MER)
Authors:Chung, W.J, Heddi, B, Schmitt, E, Lim, K.W, Mechulam, Y, Phan, A.T.
Deposit date:2014-07-25
Release date:2015-02-18
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Structure of a left-handed DNA G-quadruplex
Proc.Natl.Acad.Sci.USA, 2015

226707

数据于2024-10-30公开中

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