Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 78 results

6I04
DownloadVisualize
BU of 6i04 by Molmil
Crystal structure of Sema domain of the Met receptor in complex with FAB
Descriptor: Fab heavy chain, Fab light chain, Hepatocyte growth factor receptor
Authors:Casaletto, J.B, Geddie, M.L, Abu-Yousif, A.O, Masson, K, Fulgham, A, Boudot, A, Maiwald, T, Kearns, J.D, Kohli, N, Su, S, Razlog, M, Raue, A, Kalra, A, Hakansson, M, Logan, D.T, Welin, M, Chattopadhyay, S, Harms, B.D, Nielsen, U.B, Schoeberl, B, Lugovskoy, A.A, MacBeath, G.
Deposit date:2018-10-25
Release date:2019-03-13
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:MM-131, a bispecific anti-Met/EpCAM mAb, inhibits HGF-dependent and HGF-independent Met signaling through concurrent binding to EpCAM.
Proc.Natl.Acad.Sci.USA, 116, 2019
6I07
DownloadVisualize
BU of 6i07 by Molmil
Crystal structure of EpCAM in complex with scFv
Descriptor: Epithelial cell adhesion molecule, GLYCEROL, Single chain Fv
Authors:Casaletto, J.B, Geddie, M.L, Abu-Yousif, A.O, Masson, K, Fulgham, A, Boudot, A, Maiwald, T, Kearns, J.D, Kohli, N, Su, S, Razlog, M, Raue, A, Kalra, A, Hakansson, M, Logan, D.T, Welin, M, Chattopadhyay, S, Harms, B.D, Nielsen, U.B, Schoeberl, B, Lugovskoy, A.A, MacBeath, G.
Deposit date:2018-10-25
Release date:2019-03-13
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:MM-131, a bispecific anti-Met/EpCAM mAb, inhibits HGF-dependent and HGF-independent Met signaling through concurrent binding to EpCAM.
Proc.Natl.Acad.Sci.USA, 116, 2019
6HYG
DownloadVisualize
BU of 6hyg by Molmil
Heteromeric tandem IgG4/IgG1 Fc
Descriptor: IgHG1 and IgHG4 hybrid, ZINC ION
Authors:Casaletto, J.B, Geddie, M.L, Abu-Yousif, A.O, Masson, K, Fulgham, A, Boudot, A, Maiwald, T, Kearns, J.D, Kohli, N, Su, S, Razlog, M, Raue, A, Kalra, A, Hakansson, M, Logan, D.T, Welin, M, Chattopadhyay, S, Harms, B.D, Nielsen, U.B, Schoeberl, B, Lugovskoy, A.A, MacBeath, G.
Deposit date:2018-10-21
Release date:2019-03-13
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.31 Å)
Cite:MM-131, a bispecific anti-Met/EpCAM mAb, inhibits HGF-dependent and HGF-independent Met signaling through concurrent binding to EpCAM.
Proc.Natl.Acad.Sci.USA, 116, 2019
2Y6K
DownloadVisualize
BU of 2y6k by Molmil
Xylotetraose bound to X-2 engineered mutated CBM4-2 Carbohydrate Binding Module from a Thermostable Rhodothermus marinus Xylanase
Descriptor: CALCIUM ION, CITRIC ACID, XYLANASE, ...
Authors:von Schantz, L, Hakansson, M, Logan, D.T, Walse, B, Osterlin, J, Nordberg-Karlsson, E, Ohlin, M.
Deposit date:2011-01-24
Release date:2012-03-07
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.36 Å)
Cite:Structural basis for carbohydrate-binding specificity--a comparative assessment of two engineered carbohydrate-binding modules.
Glycobiology, 22, 2012
2Y6J
DownloadVisualize
BU of 2y6j by Molmil
X-2 engineered mutated CBM4-2 Carbohydrate Binding Module from a Thermostable Rhodothermus marinus Xylanase
Descriptor: CALCIUM ION, XYLANASE
Authors:von Schantz, L, Hakansson, M, Logan, D.T, Walse, B, Osterlin, J, Nordberg-Karlsson, E, Ohlin, M.
Deposit date:2011-01-24
Release date:2012-03-07
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structural basis for carbohydrate-binding specificity--a comparative assessment of two engineered carbohydrate-binding modules.
Glycobiology, 22, 2012
2Y64
DownloadVisualize
BU of 2y64 by Molmil
Xylopentaose binding mutated (X-2 L110F) CBM4-2 Carbohydrate Binding Module from a Thermostable Rhodothermus marinus Xylanase
Descriptor: CALCIUM ION, XYLANASE, beta-D-xylopyranose-(1-4)-beta-D-xylopyranose-(1-4)-beta-D-xylopyranose-(1-4)-beta-D-xylopyranose-(1-4)-beta-D-xylopyranose
Authors:von Schantz, L, Hakansson, M, Logan, D.T, Walse, B, Osterlin, J, Nordberg-Karlsson, E, Ohlin, M.
Deposit date:2011-01-19
Release date:2012-03-07
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Structural basis for carbohydrate-binding specificity--a comparative assessment of two engineered carbohydrate-binding modules.
Glycobiology, 22, 2012
2Y6G
DownloadVisualize
BU of 2y6g by Molmil
Cellopentaose binding mutated (X-2 L110F) CBM4-2 Carbohydrate Binding Module from a Thermostable Rhodothermus marinus Xylanase
Descriptor: CALCIUM ION, XYLANASE, beta-D-glucopyranose-(1-4)-beta-D-glucopyranose-(1-4)-beta-D-glucopyranose
Authors:von Schantz, L, Hakansson, M, Logan, D.T, Walse, B, Osterlin, J, Nordberg-Karlsson, E, Ohlin, M.
Deposit date:2011-01-21
Release date:2012-03-07
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Structural basis for carbohydrate-binding specificity--a comparative assessment of two engineered carbohydrate-binding modules.
Glycobiology, 22, 2012
2Y6H
DownloadVisualize
BU of 2y6h by Molmil
X-2 L110F CBM4-2 Carbohydrate Binding Module from a Thermostable Rhodothermus marinus Xylanase
Descriptor: CALCIUM ION, XYLANASE
Authors:von Schantz, L, Hakansson, M, Logan, D.T, Walse, B, Osterlin, J, Nordberg-Karlsson, E, Ohlin, M.
Deposit date:2011-01-21
Release date:2012-03-07
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (1.08 Å)
Cite:Structural basis for carbohydrate-binding specificity--a comparative assessment of two engineered carbohydrate-binding modules.
Glycobiology, 22, 2012
2Y6L
DownloadVisualize
BU of 2y6l by Molmil
Xylopentaose binding X-2 engineered mutated CBM4-2 Carbohydrate Binding Module from a Thermostable Rhodothermus marinus Xylanase
Descriptor: CALCIUM ION, XYLANASE, beta-D-xylopyranose-(1-4)-beta-D-xylopyranose-(1-4)-beta-D-xylopyranose-(1-4)-beta-D-xylopyranose-(1-4)-beta-D-xylopyranose
Authors:von Schantz, L, Hakansson, M, Logan, D.T, Walse, B, Osterlin, J, Nordberg-Karlsson, E, Ohlin, M.
Deposit date:2011-01-24
Release date:2012-03-07
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.28 Å)
Cite:Structural basis for carbohydrate-binding specificity--a comparative assessment of two engineered carbohydrate-binding modules.
Glycobiology, 22, 2012
6FTE
DownloadVisualize
BU of 6fte by Molmil
Crystal structure of an (R)-selective amine transaminase from Exophiala xenobiotica
Descriptor: ACETATE ION, Amine transaminase (fold IV), GLYCEROL, ...
Authors:Telzerow, A, Hakansson, M, Schurrmann, M, Schwab, H, Steiner, K.
Deposit date:2018-02-21
Release date:2019-01-09
Last modified:2020-01-29
Method:X-RAY DIFFRACTION (1.52 Å)
Cite:Amine Transaminase from Exophiala xenobiotica - Crystal Structure and Engineering of a Fold IV Transaminase that Naturally Converts Biaryl Ketones
Acs Catalysis, 2018
2XG3
DownloadVisualize
BU of 2xg3 by Molmil
Human galectin-3 in complex with a benzamido-N-acetyllactoseamine inhibitor
Descriptor: BENZAMIDE, CHLORIDE ION, Galectin-3, ...
Authors:Diehl, C, Engstrom, O, Delaine, T, Hakansson, M, Genheden, S, Modig, K, Leffler, H, Ryde, U, Nilsson, U, Akke, M.
Deposit date:2010-05-30
Release date:2010-10-13
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:Protein flexibility and conformational entropy in ligand design targeting the carbohydrate recognition domain of galectin-3.
J. Am. Chem. Soc., 132, 2010
7ZQX
DownloadVisualize
BU of 7zqx by Molmil
Human galectin-3c in complex with a galactose derivative
Descriptor: (2~{R},3~{R},4~{S},5~{R},6~{R})-2-(5-bromanylpyridin-3-yl)sulfanyl-6-(hydroxymethyl)-4-[4-[3,4,5-tris(fluoranyl)phenyl]-1,2,3-triazol-1-yl]oxane-3,5-diol, CHLORIDE ION, GLYCEROL, ...
Authors:Zetterberg, F, Nilsson, U.J, Hakansson, M, Logan, D.T.
Deposit date:2022-05-03
Release date:2022-11-02
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.05 Å)
Cite:Discovery and Optimization of the First Highly Effective and Orally Available Galectin-3 Inhibitors for Treatment of Fibrotic Disease.
J.Med.Chem., 65, 2022
4A6R
DownloadVisualize
BU of 4a6r by Molmil
Crystal structure of the omega transaminase from Chromobacterium violaceum in the apo form, crystallised from polyacrylic acid
Descriptor: OMEGA TRANSAMINASE, POLYACRYLIC ACID
Authors:Logan, D.T, Hakansson, M, Yengo, K, Svedendahl Humble, M, Engelmark Cassimjee, K, Walse, B, Abedi, V, Federsel, H.-J, Berglund, P.
Deposit date:2011-11-08
Release date:2012-01-25
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.349 Å)
Cite:Crystal Structures of the Chromobacterium Violaceum Omega-Transaminase Reveal Major Structural Rearrangements Upon Binding of Coenzyme Plp.
FEBS J., 279, 2012
4A6U
DownloadVisualize
BU of 4a6u by Molmil
Crystal structure of the omega transaminase from Chromobacterium violaceum in the apo form, crystallised from PEG 3350
Descriptor: OMEGA TRANSAMINASE, SODIUM ION, THIOCYANATE ION
Authors:Logan, D.T, Hakansson, M, Yengo, K, Svedendahl Humble, M, Engelmark Cassimjee, K, Walse, B, Abedi, V, Federsel, H.-J, Berglund, P.
Deposit date:2011-11-08
Release date:2012-01-25
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.687 Å)
Cite:Crystal Structures of the Chromobacterium Violaceum Omega-Transaminase Reveal Major Structural Rearrangements Upon Binding of Coenzyme Plp.
FEBS J., 279, 2012
4A6T
DownloadVisualize
BU of 4a6t by Molmil
Crystal structure of the omega transaminase from Chromobacterium violaceum in complex with PLP
Descriptor: OMEGA TRANSAMINASE, PYRIDOXAL-5'-PHOSPHATE
Authors:Logan, D.T, Hakansson, M, Yengo, K, Svedendahl Humble, M, Engelmark Cassimjee, K, Walse, B, Abedi, V, Federsel, H.-J, Berglund, P.
Deposit date:2011-11-08
Release date:2012-01-25
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal Structures of the Chromobacterium Violaceum Omega-Transaminase Reveal Major Structural Rearrangements Upon Binding of Coenzyme Plp.
FEBS J., 279, 2012
4A72
DownloadVisualize
BU of 4a72 by Molmil
Crystal structure of the omega transaminase from Chromobacterium violaceum in a mixture of apo and PLP-bound states
Descriptor: OMEGA TRANSAMINASE, PYRIDOXAL-5'-PHOSPHATE
Authors:Logan, D.T, Hakansson, M, Yengo, K, Svedendahl Humble, M, Engelmark Cassimjee, K, Walse, B, Abedi, V, Federsel, H.-J, Berglund, P.
Deposit date:2011-11-10
Release date:2012-01-25
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal Structures of the Chromobacterium Violaceum Omega-Transaminase Reveal Major Structural Rearrangements Upon Binding of Coenzyme Plp.
FEBS J., 279, 2012
4BJ0
DownloadVisualize
BU of 4bj0 by Molmil
Xyloglucan binding module (CBM4-2 X2-L110F) in complex with branched xyloses
Descriptor: CALCIUM ION, XYLANASE, alpha-D-glucopyranose, ...
Authors:Schantz, L, Hakansson, M, Logan, D.T, Nordberg-Karlsson, E, Ohlin, M.
Deposit date:2013-04-15
Release date:2014-04-23
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1 Å)
Cite:Carbohydrate Binding Module Recognition of Xyloglucan Defined by Polar Contacts with Branching Xyloses and Ch-Pi Interactions.
Proteins, 82, 2014
1HXY
DownloadVisualize
BU of 1hxy by Molmil
CRYSTAL STRUCTURE OF STAPHYLOCOCCAL ENTEROTOXIN H IN COMPLEX WITH HUMAN MHC CLASS II
Descriptor: ENTEROTOXIN H, HEMAGGLUTININ, HLA CLASS II HISTOCOMPATIBILITY ANTIGEN, ...
Authors:Petersson, K, Hakansson, M, Nilsson, H, Forsberg, G, Svensson, L.A, Liljas, A, Walse, B.
Deposit date:2001-01-17
Release date:2001-06-27
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Crystal Structure of a Superantigen Bound to MHC Class II Displays Zinc and Peptide Dependence
Embo J., 20, 2001
6ZBA
DownloadVisualize
BU of 6zba by Molmil
Crystal structure of PDE4D2 in complex with inhibitor LEO39652
Descriptor: 1,2-ETHANEDIOL, 2-methylpropyl 1-[8-methoxy-5-(1-oxidanylidene-3~{H}-2-benzofuran-5-yl)-[1,2,4]triazolo[1,5-a]pyridin-2-yl]cyclopropane-1-carboxylate, DIMETHYL SULFOXIDE, ...
Authors:Akutsu, M, Hakansson, M, Welin, M, Svensson, A, Logan, D.T, Sorensen, M.D.
Deposit date:2020-06-08
Release date:2020-09-23
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Discovery and Early Clinical Development of Isobutyl 1-[8-Methoxy-5-(1-oxo-3 H -isobenzofuran-5-yl)-[1,2,4]triazolo[1,5- a ]pyridin-2-yl]cyclopropanecarboxylate (LEO 39652), a Novel "Dual-Soft" PDE4 Inhibitor for Topical Treatment of Atopic Dermatitis.
J.Med.Chem., 63, 2020
3ZSJ
DownloadVisualize
BU of 3zsj by Molmil
Crystal structure of Human Galectin-3 CRD in complex with Lactose at 0.86 angstrom resolution
Descriptor: GALECTIN-3, beta-D-galactopyranose-(1-4)-beta-D-glucopyranose
Authors:Saraboji, K, Hakansson, M, Diehl, C, Nilsson, U.J, Leffler, H, Akke, M, Logan, D.T.
Deposit date:2011-06-28
Release date:2011-12-14
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (0.86 Å)
Cite:The Carbohydrate-Binding Site in Galectin-3 is Pre-Organized to Recognize a Sugar-Like Framework of Oxygens: Ultra-High Resolution Structures and Water Dynamics.
Biochemistry, 51, 2012
3ZSL
DownloadVisualize
BU of 3zsl by Molmil
Crystal structure of Apo Human Galectin-3 CRD at 1.08 angstrom resolution, at cryogenic temperature
Descriptor: GALECTIN-3
Authors:Saraboji, K, Hakansson, M, Diehl, C, Nilsson, U.J, Leffler, H, Akke, M, Logan, D.T.
Deposit date:2011-06-28
Release date:2011-12-14
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.08 Å)
Cite:The Carbohydrate-Binding Site in Galectin-3 is Pre-Organized to Recognize a Sugar-Like Framework of Oxygens: Ultra-High Resolution Structures and Water Dynamics.
Biochemistry, 51, 2012
3ZSM
DownloadVisualize
BU of 3zsm by Molmil
Crystal structure of Apo Human Galectin-3 CRD at 1.25 angstrom resolution, at room temperature
Descriptor: GALECTIN-3
Authors:Saraboji, K, Hakansson, M, Diehl, C, Nilsson, U.J, Leffler, H, Akke, M, Logan, D.T.
Deposit date:2011-06-28
Release date:2011-12-14
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.25 Å)
Cite:The Carbohydrate-Binding Site in Galectin-3 is Pre-Organized to Recognize a Sugar-Like Framework of Oxygens: Ultra-High Resolution Structures and Water Dynamics.
Biochemistry, 51, 2012
3ZSK
DownloadVisualize
BU of 3zsk by Molmil
Crystal structure of Human Galectin-3 CRD with glycerol bound at 0.90 angstrom resolution
Descriptor: GALECTIN-3, GLYCEROL
Authors:Saraboji, K, Hakansson, M, Diehl, C, Nilsson, U.J, Leffler, H, Akke, M, Logan, D.T.
Deposit date:2011-06-28
Release date:2011-12-14
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (0.9 Å)
Cite:The Carbohydrate-Binding Site in Galectin-3 is Pre-Organized to Recognize a Sugar-Like Framework of Oxygens: Ultra-High Resolution Structures and Water Dynamics.
Biochemistry, 51, 2012
4BFC
DownloadVisualize
BU of 4bfc by Molmil
Crystal structure of the C-terminal CMP-Kdo binding domain of WaaA from Acinetobacter baumannii
Descriptor: 3-DEOXY-D-MANNO-OCTULOSONIC-ACID TRANSFERASE, BETA-MERCAPTOETHANOL, SULFATE ION
Authors:Kimbung, Y.R, Hakansson, M, Logan, D, Wang, P.F, Schulz, M, Mamat, U, Woodard, R.W.
Deposit date:2013-03-18
Release date:2014-04-02
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystal Structure of the C-Terminal Cmp-Kdo Binding Domain of Waaa from Acinetobacter Baumannii
To be Published
4BLI
DownloadVisualize
BU of 4bli by Molmil
Galectin-3c in complex with Bisamido-thiogalactoside derivate 1
Descriptor: (3-Deoxy-3-(3-methoxy-benzamido)-b-D-galactopyranosyl)-(3-deoxy-3-(3-methoxy-benzamido)-2-O-sulfo-b-D-galactopyranosyl)-sulfide, GALECTIN-3
Authors:Noresson, A.L, Oberg, C.T, Engstrom, O, Hakansson, M, Logan, D.T, Leffler, H, Nilsson, U.J.
Deposit date:2013-05-03
Release date:2014-05-21
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.08 Å)
Cite:Controlling Protein Conformation Through Electronic Fine-Tuning of Arginine-Arene Interactions: Synthetic, Structural, and Biological Studies
To be Published

219869

PDB entries from 2024-05-15

PDB statisticsPDBj update infoContact PDBjnumon