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PDB: 99 results

6IYF
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BU of 6iyf by Molmil
Structure of pSTING complex
Descriptor: (2R,3R,3aS,5R,7aR,9R,10R,10aS,12R,14aR)-2,9-bis(6-amino-9H-purin-9-yl)octahydro-2H,7H-difuro[3,2-d:3',2'-j][1,3,7,9,2,8 ]tetraoxadiphosphacyclododecine-3,5,10,12-tetrol 5,12-dioxide, SULFATE ION, Stimulator of interferon genes protein
Authors:Yuan, Z.L, Shang, G.J, Cong, X.Y, Gu, L.C.
Deposit date:2018-12-15
Release date:2019-06-19
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (1.764 Å)
Cite:Crystal structures of porcine STINGCBD-CDN complexes reveal the mechanism of ligand recognition and discrimination of STING proteins.
J.Biol.Chem., 294, 2019
5ZO5
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BU of 5zo5 by Molmil
active state of the nuclease
Descriptor: MANGANESE (II) ION, Putative 3'-5' exonuclease family protein, SULFATE ION
Authors:Yuan, Z.L, Gu, L.C.
Deposit date:2018-04-12
Release date:2019-04-10
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2.297 Å)
Cite:NrnC, an RNase D-Like Protein FromAgrobacterium, Is a Novel Octameric Nuclease That Specifically Degrades dsDNA but Leaves dsRNA Intact.
Front Microbiol, 9, 2018
3Q7J
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BU of 3q7j by Molmil
Engineered Thermoplasma Acidophilum F3 factor mimics human aminopeptidase N (APN) as a target for anticancer drug development
Descriptor: L-phenylalanyl-N6-[(benzyloxy)carbonyl]-N1-hydroxy-L-lysinamide, Tricorn protease-interacting factor F3, ZINC ION
Authors:Su, J, Wang, Q, Feng, J, Zhang, C, Zhu, D, We, T, Xu, W, Gu, L.
Deposit date:2011-01-05
Release date:2011-07-27
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.91 Å)
Cite:Engineered Thermoplasma acidophilum factor F3 mimics human aminopeptidase N (APN) as a target for anticancer drug development
Bioorg.Med.Chem., 19, 2011
3TLQ
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BU of 3tlq by Molmil
Crystal structure of EAL-like domain protein YdiV
Descriptor: GLYCEROL, PHOSPHATE ION, Regulatory protein YdiV
Authors:Li, B, Li, N, Wang, F, Guo, L, Liu, C, Zhu, D, Xu, S, Gu, L.
Deposit date:2011-08-30
Release date:2012-09-12
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.91 Å)
Cite:Structural insight of a concentration-dependent mechanism by which YdiV inhibits Escherichia coli flagellum biogenesis and motility
Nucleic Acids Res., 40, 2012
5ZO3
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BU of 5zo3 by Molmil
apo form of the nuclease
Descriptor: 1,2-ETHANEDIOL, Putative 3'-5' exonuclease family protein, SULFATE ION
Authors:Yuan, Z.L, Gu, L.C.
Deposit date:2018-04-12
Release date:2019-04-10
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (1.493 Å)
Cite:NrnC, an RNase D-Like Protein FromAgrobacterium, Is a Novel Octameric Nuclease That Specifically Degrades dsDNA but Leaves dsRNA Intact.
Front Microbiol, 9, 2018
5ZO4
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BU of 5zo4 by Molmil
inactive state of the nuclease
Descriptor: MANGANESE (II) ION, Putative 3'-5' exonuclease family protein, SULFATE ION
Authors:Yuan, Z.L, Gu, L.C.
Deposit date:2018-04-12
Release date:2019-04-10
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:NrnC, an RNase D-Like Protein FromAgrobacterium, Is a Novel Octameric Nuclease That Specifically Degrades dsDNA but Leaves dsRNA Intact.
Front Microbiol, 9, 2018
4WXW
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BU of 4wxw by Molmil
SadC (323-487) from Pseudomonas aeruginosa PAO1
Descriptor: MAGNESIUM ION, Uncharacterized protein
Authors:Liu, C, Liu, S, Gu, L.
Deposit date:2014-11-14
Release date:2015-11-18
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structure of SadC (323-487) from Pseudomonas aeruginosa PAO1
To Be Published
4WXO
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BU of 4wxo by Molmil
SadC (300-487) from Pseudomonas aeruginosa PAO1
Descriptor: Uncharacterized protein
Authors:Liu, C, Liu, S, Gu, L.
Deposit date:2014-11-14
Release date:2015-11-18
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.805 Å)
Cite:Crystal structure of SadC (300-487) from Pseudomonas aeruginosa PAO1
To Be Published
6A06
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BU of 6a06 by Molmil
Structure of pSTING complex
Descriptor: SULFATE ION, Stimulator of interferon genes protein, cGAMP
Authors:Yuan, Z.L, Shang, G.J, Cong, X.Y, Gu, L.C.
Deposit date:2018-06-05
Release date:2019-06-19
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (1.792 Å)
Cite:Crystal structures of porcine STINGCBD-CDN complexes reveal the mechanism of ligand recognition and discrimination of STING proteins.
J.Biol.Chem., 294, 2019
6A04
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BU of 6a04 by Molmil
Structure of pSTING complex
Descriptor: 9,9'-[(2R,3R,3aS,5S,7aR,9R,10R,10aS,12S,14aR)-3,5,10,12-tetrahydroxy-5,12-dioxidooctahydro-2H,7H-difuro[3,2-d:3',2'-j][1,3,7,9,2,8]tetraoxadiphosphacyclododecine-2,9-diyl]bis(2-amino-1,9-dihydro-6H-purin-6-one), SULFATE ION, Stimulator of interferon genes protein
Authors:Yuan, Z.L, Shang, G.J, Cong, X.Y, Gu, L.C.
Deposit date:2018-06-05
Release date:2019-06-19
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structures of porcine STINGCBD-CDN complexes reveal the mechanism of ligand recognition and discrimination of STING proteins.
J.Biol.Chem., 294, 2019
4ZMU
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BU of 4zmu by Molmil
Dcsbis, a diguanylate cyclase from Pseudomonas aeruginosa
Descriptor: diguanylate cyclase
Authors:Chen, Y, Liu, C, Liu, S, Chi, K, Gu, L.
Deposit date:2015-05-04
Release date:2016-05-04
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.502 Å)
Cite:crystal structure of Dcsbis from Pseudomonas aeruginosa
To Be Published
4ZMM
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BU of 4zmm by Molmil
GGDEF domain of Dcsbis complexed with c-di-GMP
Descriptor: 9,9'-[(2R,3R,3aS,5S,7aR,9R,10R,10aS,12S,14aR)-3,5,10,12-tetrahydroxy-5,12-dioxidooctahydro-2H,7H-difuro[3,2-d:3',2'-j][1,3,7,9,2,8]tetraoxadiphosphacyclododecine-2,9-diyl]bis(2-amino-1,9-dihydro-6H-purin-6-one), diguanylate cyclase
Authors:Chen, Y, Liu, C, Liu, S, Chi, K, Gu, L.
Deposit date:2015-05-04
Release date:2016-05-04
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.503 Å)
Cite:Crystal structure of Dcsbis GGDEF domain complexed with c-di-GMP
To Be Published
6A05
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BU of 6a05 by Molmil
Structure of pSTING complex
Descriptor: 2-amino-9-[(2R,3R,3aR,5S,7aS,9R,10R,10aR,12R,14aS)-9-(6-amino-9H-purin-9-yl)-3,5,10,12-tetrahydroxy-5,12-dioxidooctahydro-2H,7H-difuro[3,2-d:3',2'-j][1,3,7,9,2,8]tetraoxadiphosphacyclododecin-2-yl]-1,9-dihydro-6H-purin-6-one, SULFATE ION, Stimulator of interferon genes protein
Authors:Yuan, Z.L, Shang, G.J, Cong, X.Y, Gu, L.C.
Deposit date:2018-06-05
Release date:2019-06-19
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structures of porcine STINGCBD-CDN complexes reveal the mechanism of ligand recognition and discrimination of STING proteins.
J.Biol.Chem., 294, 2019
6A03
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BU of 6a03 by Molmil
Structure of pSTING complex
Descriptor: (2R,3R,3aS,5R,7aR,9R,10R,10aS,12R,14aR)-2,9-bis(6-amino-9H-purin-9-yl)octahydro-2H,7H-difuro[3,2-d:3',2'-j][1,3,7,9,2,8 ]tetraoxadiphosphacyclododecine-3,5,10,12-tetrol 5,12-dioxide, SULFATE ION, Stimulator of interferon genes protein
Authors:Yuan, Z.L, Shang, G.J, Cong, X.Y, Gu, L.C.
Deposit date:2018-06-05
Release date:2019-06-19
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2.597 Å)
Cite:Crystal structures of porcine STINGCBD-CDN complexes reveal the mechanism of ligand recognition and discrimination of STING proteins.
J.Biol.Chem., 294, 2019
3PFT
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BU of 3pft by Molmil
Crystal Structure of Untagged C54A Mutant Flavin Reductase (DszD) in Complex with FMN From Mycobacterium goodii
Descriptor: FLAVIN MONONUCLEOTIDE, Flavin reductase
Authors:Li, Q, Xu, P, Ma, C, Gu, L, Liu, X, Zhang, C, Li, N, Su, J, Li, B, Liu, S.
Deposit date:2010-10-29
Release date:2011-11-02
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.601 Å)
Cite:The flavin reductase DSZD from a desulfurizing mycobacterium goodii strain: systemic manipulation and investigation based on the crystal structure
To be Published
5CET
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BU of 5cet by Molmil
Crystal structure of Rv2837c
Descriptor: Bifunctional oligoribonuclease and PAP phosphatase NrnA, MANGANESE (II) ION
Authors:Wang, F, He, Q, Zhu, D, Liu, S, Gu, L.
Deposit date:2015-07-07
Release date:2015-12-23
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural and Biochemical Insight into the Mechanism of Rv2837c from Mycobacterium tuberculosis as a c-di-NMP Phosphodiesterase
J.Biol.Chem., 291, 2016
2NRF
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BU of 2nrf by Molmil
Crystal Structure of GlpG, a Rhomboid family intramembrane protease
Descriptor: Protein GlpG
Authors:Wu, Z, Yan, N, Feng, L, Yan, H, Gu, L, Shi, Y.
Deposit date:2006-11-02
Release date:2006-11-14
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structural analysis of a rhomboid family intramembrane protease reveals a gating mechanism for substrate entry.
Nat.Struct.Mol.Biol., 13, 2006
6NZS
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BU of 6nzs by Molmil
Dextranase AoDex KQ11
Descriptor: Dextranase
Authors:Ren, W, Yan, W, Gu, L, Feng, Y, Dong, D, Wang, S, Wang, C, Lyu, M.
Deposit date:2019-02-14
Release date:2019-02-27
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Crystal structure of thermophilic dextranase from Thermoanaerobacter pseudethanolicus
To Be Published
5DV9
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BU of 5dv9 by Molmil
Crystal structure of the Luciferase
Descriptor: Luciferin 4-monooxygenase
Authors:Su, J, Li, Z, Yuan, Z, Gu, L.
Deposit date:2015-09-21
Release date:2016-09-28
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal structure of the Luciferase
To Be Published
3HGK
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BU of 3hgk by Molmil
crystal structure of effect protein AvrptoB complexed with kinase Pto
Descriptor: Effector protein hopAB2, Protein kinase
Authors:Dong, J, Fan, F, Gu, L, Chai, J.
Deposit date:2009-05-14
Release date:2009-06-23
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:Crystal Structure of the Complex between Pseudomonas Effector AvrPtoB and the Tomato Pto Kinase Reveals Both a Shared and a Unique Interface Compared with AvrPto-Pto
Plant Cell, 21, 2009
3HGL
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BU of 3hgl by Molmil
crystal of AvrPtoB 121-205
Descriptor: Effector protein hopAB2
Authors:Dong, J, Xiao, F, Fan, F, Gu, L, Cang, H, Martin, G.B, Chai, J.
Deposit date:2009-05-14
Release date:2009-06-23
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal Structure of the Complex between Pseudomonas Effector AvrPtoB and the Tomato Pto Kinase Reveals Both a Shared and a Unique Interface Compared with AvrPto-Pto
Plant Cell, 21, 2009
5XLX
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BU of 5xlx by Molmil
Crystal structure of the C-terminal domain of CheR1 containing SAH
Descriptor: Chemotaxis protein methyltransferase 1, S-ADENOSYL-L-HOMOCYSTEINE
Authors:Yuan, Z, Zhu, Y, Gu, L.
Deposit date:2017-05-12
Release date:2017-08-23
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (1.969 Å)
Cite:Structural basis for the regulation of chemotaxis by MapZ in the presence of c-di-GMP
Acta Crystallogr D Struct Biol, 73, 2017
5DWV
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BU of 5dwv by Molmil
Crystal structure of the Luciferase complexed with substrate analogue
Descriptor: 2-[6-(cyclobuta-1,3-dien-1-ylamino)-1,3-benzothiazol-2-yl]-1,3-thiazol-4-ol, Luciferin 4-monooxygenase
Authors:Su, J, Li, Z, Yuan, Z, Gu, L.
Deposit date:2015-09-23
Release date:2016-09-28
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal structure of the Luciferase complexed with substrate analogue
To Be Published
3TGV
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BU of 3tgv by Molmil
Crystal structure of HutZ,the heme storsge protein from Vibrio cholerae
Descriptor: BENZOIC ACID, Heme-binding protein HutZ
Authors:Liu, X, Gong, J, Wang, Z, Du, Q, Wei, T, Zhu, D, Huang, Y, Xu, S, Gu, L.
Deposit date:2011-08-17
Release date:2012-08-22
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.999 Å)
Cite:Crystal structure of HutZ,the heme storsge protein from Vibrio cholerae
To be Published
3TLK
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BU of 3tlk by Molmil
Crystal structure of holo FepB
Descriptor: 1,4-DIETHYLENE DIOXIDE, FE (III) ION, Ferrienterobactin-binding periplasmic protein, ...
Authors:Li, N, Gu, L.
Deposit date:2011-08-30
Release date:2013-01-16
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.853 Å)
Cite:Crystal structure of holo FepB
To be Published

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PDB entries from 2024-07-17

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