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PDB: 16 件

6XWX
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BU of 6xwx by Molmil
Crystal structure of the Tof1-Csm3 complex
分子名称: Chromosome segregation in meiosis protein, Uncharacterized protein,Uncharacterized protein
著者Grabarczyk, D.B.
登録日2020-01-24
公開日2020-05-27
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (3.1 Å)
主引用文献Crystal structure and interactions of the Tof1-Csm3 (Timeless-Tipin) fork protection complex.
Nucleic Acids Res., 48, 2020
4V2K
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BU of 4v2k by Molmil
Crystal structure of the thiosulfate dehydrogenase TsdA in complex with thiosulfate
分子名称: HEME C, THIOSULFATE, THIOSULFATE DEHYDROGENASE
著者Grabarczyk, D.B, Chappell, P.E, Eisel, B, Johnson, S, Lea, S.M, Berks, B.C.
登録日2014-10-10
公開日2015-02-18
最終更新日2024-11-06
実験手法X-RAY DIFFRACTION (1.29 Å)
主引用文献Mechanism of Thiosulfate Oxidation in the Soxa Family of Cysteine-Ligated Cytochromes
J.Biol.Chem., 290, 2015
4UWQ
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BU of 4uwq by Molmil
Crystal structure of the disulfide-linked complex of the thiosulfodyrolase SoxB with the carrier-protein SoxYZ from Thermus thermophilus
分子名称: MANGANESE (II) ION, SOXY PROTEIN, SOXZ, ...
著者Grabarczyk, D.B, Chappell, P.E, Johnson, S, Stelzl, L.S, Lea, S.M, Berks, B.C.
登録日2014-08-14
公開日2015-12-09
最終更新日2024-10-23
実験手法X-RAY DIFFRACTION (3.28 Å)
主引用文献Structural Basis for Specificity and Promiscuity in a Carrier Protein/Enzyme System from the Sulfur Cycle
Proc.Natl.Acad.Sci.USA, 112, 2015
7OIK
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BU of 7oik by Molmil
Mouse RNF213:UBE2L3 transthiolation intermediate, chemically stabilized
分子名称: ADENOSINE-5'-TRIPHOSPHATE, E3 ubiquitin-protein ligase RNF213, MAGNESIUM ION, ...
著者Grabarczyk, D, Ahel, J, Clausen, T.
登録日2021-05-11
公開日2022-06-01
最終更新日2024-10-09
実験手法ELECTRON MICROSCOPY (3.5 Å)
主引用文献E3 ubiquitin ligase RNF213 employs a non-canonical zinc finger active site and is allosterically regulated by ATP
To Be Published
7OIM
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BU of 7oim by Molmil
Mouse RNF213, with mixed nucleotides bound
分子名称: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, E3 ubiquitin-protein ligase RNF213, ...
著者Grabarczyk, D, Ahel, J, Clausen, T.
登録日2021-05-11
公開日2022-06-01
最終更新日2024-10-23
実験手法ELECTRON MICROSCOPY (4 Å)
主引用文献E3 ubiquitin ligase RNF213 employs a non-canonical zinc finger active site and is allosterically regulated by ATP
To Be Published
7BII
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BU of 7bii by Molmil
Crystal structure of Nematocida HUWE1
分子名称: E3 ubiquitin-protein ligase HUWE1
著者Grabarczyk, D.B, Petrova, O.A, Meinhart, A, Kessler, D, Clausen, T.
登録日2021-01-12
公開日2021-07-28
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (3.037 Å)
主引用文献HUWE1 employs a giant substrate-binding ring to feed and regulate its HECT E3 domain.
Nat.Chem.Biol., 17, 2021
5OKC
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BU of 5okc by Molmil
Crystal structure of the Ctf18-1-8 module from Ctf18-RFC
分子名称: 1,2-ETHANEDIOL, Chromosome transmission fidelity protein 18, Chromosome transmission fidelity protein 8, ...
著者Grabarczyk, D.B, Kisker, C.
登録日2017-07-25
公開日2017-12-20
最終更新日2024-11-06
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structural Basis for the Recruitment of Ctf18-RFC to the Replisome.
Structure, 26, 2018
6S2F
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BU of 6s2f by Molmil
Cryo-EM structure of Ctf18-1-8 in complex with the catalytic domain of DNA polymerase epsilon (Class 2)
分子名称: Chromosome transmission fidelity protein 18, Chromosome transmission fidelity protein 8, DNA polymerase epsilon catalytic subunit A, ...
著者Grabarczyk, D.B, Song, B.
登録日2019-06-20
公開日2020-07-08
最終更新日2024-05-22
実験手法ELECTRON MICROSCOPY (5.8 Å)
主引用文献Ctf18-RFC and DNA Pol ε form a stable leading strand polymerase/clamp loader complex required for normal and perturbed DNA replication.
Nucleic Acids Res., 48, 2020
6S2E
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BU of 6s2e by Molmil
Cryo-EM structure of Ctf18-1-8 in complex with the catalytic domain of DNA polymerase epsilon
分子名称: Chromosome transmission fidelity protein 18, Chromosome transmission fidelity protein 8, DNA polymerase epsilon catalytic subunit A, ...
著者Grabarczyk, D.B, Song, B.
登録日2019-06-20
公開日2020-07-08
最終更新日2024-07-10
実験手法ELECTRON MICROSCOPY (4.2 Å)
主引用文献Ctf18-RFC and DNA Pol ε form a stable leading strand polymerase/clamp loader complex required for normal and perturbed DNA replication.
Nucleic Acids Res., 48, 2020
6S1C
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BU of 6s1c by Molmil
P3221 crystal form of the Ctf18-1-8/Pol2(1-528) complex
分子名称: Chromosome transmission fidelity protein 18, Chromosome transmission fidelity protein 8, DNA polymerase epsilon catalytic subunit A, ...
著者Grabarczyk, D.B.
登録日2019-06-18
公開日2020-07-08
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (6.1 Å)
主引用文献Ctf18-RFC and DNA Pol ε form a stable leading strand polymerase/clamp loader complex required for normal and perturbed DNA replication.
Nucleic Acids Res., 48, 2020
5OKI
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BU of 5oki by Molmil
Crystal structure of the Ctf18-1-8 module from Ctf18-RFC in complex with a 63 kDa fragment of DNA Polymerase epsilon
分子名称: Chromosome transmission fidelity protein 18, Chromosome transmission fidelity protein 8, DNA polymerase epsilon catalytic subunit A, ...
著者Grabarczyk, D.B, Kisker, C.
登録日2017-07-25
公開日2017-12-20
最終更新日2024-11-13
実験手法X-RAY DIFFRACTION (4.5 Å)
主引用文献Structural Basis for the Recruitment of Ctf18-RFC to the Replisome.
Structure, 26, 2018
8ATX
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BU of 8atx by Molmil
Cryo-EM structure of human BIRC6 - no substrate
分子名称: Baculoviral IAP repeat-containing protein 6, ZINC ION
著者Ehrmann, J.F, Grabarczyk, D.B, Clausen, T.
登録日2022-08-24
公開日2023-02-15
最終更新日2024-07-24
実験手法ELECTRON MICROSCOPY (7 Å)
主引用文献Structural basis for regulation of apoptosis and autophagy by the BIRC6/SMAC complex.
Science, 379, 2023
8ATU
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BU of 8atu by Molmil
Cryo-EM structure of human BIRC6
分子名称: Baculoviral IAP repeat-containing protein 6, ZINC ION
著者Ehrmann, J.F, Grabarczyk, D.B, Clausen, T.
登録日2022-08-24
公開日2023-02-15
最終更新日2024-07-24
実験手法ELECTRON MICROSCOPY (3.3 Å)
主引用文献Structural basis for regulation of apoptosis and autophagy by the BIRC6/SMAC complex.
Science, 379, 2023
8AUW
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BU of 8auw by Molmil
Cryo-EM structure of human BIRC6 in complex with SMAC.
分子名称: Baculoviral IAP repeat-containing protein 6, Diablo IAP-binding mitochondrial protein, ZINC ION
著者Ehrmann, J.F, Grabarczyk, D.B, Clausen, T.
登録日2022-08-25
公開日2023-02-15
最終更新日2024-10-16
実験手法ELECTRON MICROSCOPY (7.2 Å)
主引用文献Structural basis for regulation of apoptosis and autophagy by the BIRC6/SMAC complex.
Science, 379, 2023
8AUK
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BU of 8auk by Molmil
Cryo-EM structure of human BIRC6 in complex with HTRA2.
分子名称: Baculoviral IAP repeat-containing protein 6, Serine protease HTRA2, mitochondrial, ...
著者Ehrmann, J.F, Grabarczyk, D.B, Clausen, T.
登録日2022-08-25
公開日2023-02-15
最終更新日2024-07-24
実験手法ELECTRON MICROSCOPY (6.2 Å)
主引用文献Structural basis for regulation of apoptosis and autophagy by the BIRC6/SMAC complex.
Science, 379, 2023
7NH3
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BU of 7nh3 by Molmil
Nematocida Huwe1 in open conformation.
分子名称: E3 ubiquitin-protein ligase HUWE1
著者Petrova, O, Grishkovskaya, I, Grabarczyk, D.B, Kessler, D, Haselbach, D, Clausen, T.
登録日2021-02-09
公開日2022-03-02
最終更新日2024-07-10
実験手法ELECTRON MICROSCOPY (6.37 Å)
主引用文献Crystal structure of HUWE1: One ring to ubiquitinate them all
To Be Published

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件を2024-11-13に公開中

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