Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 57 件

3BEP
DownloadVisualize
BU of 3bep by Molmil
Structure of a sliding clamp on DNA
分子名称: 1-(3-hydroxypropyl)-2-{(1E,3E,5E)-5-[1-(3-hydroxypropyl)-3,3-dimethyl-1,3-dihydro-2H-indol-2-ylidene]penta-1,3-dien-1-y l}-3,3-dimethyl-3H-indolium, DNA (5'-D(*DTP*DTP*DTP*DTP*DAP*DTP*DAP*DCP*DGP*DAP*DTP*DGP*DGP*DG)-3'), DNA (5'-D(P*DCP*DCP*DCP*DAP*DTP*DCP*DGP*DTP*DAP*DT)-3'), ...
著者Georgescu, R.E, Kim, S.S, Yurieva, O, Kuriyan, J, Kong, X.-P, O'Donnell, M.
登録日2007-11-19
公開日2008-01-29
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.92 Å)
主引用文献Structure of a sliding clamp on DNA
Cell(Cambridge,Mass.), 132, 2008
3D1E
DownloadVisualize
BU of 3d1e by Molmil
Crystal structure of E. coli sliding clamp (beta) bound to a polymerase II peptide
分子名称: DNA polymerase III subunit beta, decamer from polymerase II C-terminal
著者Georgescu, R.E, Yurieva, O, Seung-Sup, K, Kuriyan, J, Kong, X.-P, O'Donnell, M.
登録日2008-05-05
公開日2008-07-29
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structure of a small-molecule inhibitor of a DNA polymerase sliding clamp.
Proc.Natl.Acad.Sci.Usa, 105, 2008
3D1G
DownloadVisualize
BU of 3d1g by Molmil
Structure of a small molecule inhibitor bound to a DNA sliding clamp
分子名称: DNA polymerase III subunit beta, [(5R)-5-(2,3-dibromo-5-ethoxy-4-hydroxybenzyl)-4-oxo-2-thioxo-1,3-thiazolidin-3-yl]acetic acid
著者Georgescu, R.E, Yurieva, O, Seung-Sup, K, Kuriyan, J, Kong, X.-P, O'Donnell, M.
登録日2008-05-05
公開日2008-07-29
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.64 Å)
主引用文献Structure of a small-molecule inhibitor of a DNA polymerase sliding clamp.
Proc.Natl.Acad.Sci.Usa, 105, 2008
3D1F
DownloadVisualize
BU of 3d1f by Molmil
Crystal structure of E. coli sliding clamp (beta) bound to a polymerase III peptide
分子名称: 2-[3,6-bis(dimethylamino)xanthen-9-yl]-5-methanoyl-benzoate, DI(HYDROXYETHYL)ETHER, DNA polymerase III subunit beta, ...
著者Georgescu, R.E, Yurieva, O, Seung-Sup, K, Kuriyan, J, Kong, X.-P, O'Donnell, M.
登録日2008-05-05
公開日2008-07-29
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structure of a small-molecule inhibitor of a DNA polymerase sliding clamp.
Proc.Natl.Acad.Sci.Usa, 105, 2008
6WG7
DownloadVisualize
BU of 6wg7 by Molmil
Coordinates of NanR dimer fitted in Hexameric NanR-DNA hetero-complex cryo-EM map
分子名称: DNA (35-MER), HTH-type transcriptional repressor NanR
著者Hariprasad, V, Horne, C, Santosh, P, Amy, H, Emre, B, Rachel, N, Michael, G, Georg, R, Borries, D, Renwick, D.
登録日2020-04-05
公開日2021-03-10
最終更新日2024-03-06
実験手法ELECTRON MICROSCOPY (8.3 Å)
主引用文献Mechanism of NanR gene repression and allosteric induction of bacterial sialic acid metabolism.
Nat Commun, 12, 2021
6WFQ
DownloadVisualize
BU of 6wfq by Molmil
NanR dimer-DNA hetero-complex
分子名称: DNA (5'-D(P*GP*GP*TP*AP*TP*AP*AP*CP*AP*GP*GP*TP*AP*TP*A)-3'), DNA (5'-D(P*TP*AP*TP*AP*CP*CP*TP*GP*TP*TP*AP*TP*AP*CP*C)-3'), HTH-type transcriptional repressor NanR
著者Hariprasad, V, Horne, C, Santosh, P, Amy, H, Emre, B, Rachel, N, Michael, G, Georg, R, Borries, D, Renwick, D.
登録日2020-04-03
公開日2021-03-10
最終更新日2024-03-06
実験手法ELECTRON MICROSCOPY (3.9 Å)
主引用文献Mechanism of NanR gene repression and allosteric induction of bacterial sialic acid metabolism.
Nat Commun, 12, 2021
4UX8
DownloadVisualize
BU of 4ux8 by Molmil
RET recognition of GDNF-GFRalpha1 ligand by a composite binding site promotes membrane-proximal self-association
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, GDNF FAMILY RECEPTOR ALPHA-1, ...
著者Goodman, K, Kjaer, S, Beuron, F, Knowles, P, Nawrotek, A, Burns, E, Purkiss, A, George, R, Santoro, M, Morris, E.P, McDonald, N.Q.
登録日2014-08-19
公開日2014-10-01
最終更新日2020-07-29
実験手法ELECTRON MICROSCOPY (24 Å)
主引用文献Ret Recognition of Gdnf-Gfralpha1 Ligand by a Composite Binding Site Promotes Membrane-Proximal Self-Association.
Cell Rep., 8, 2014
6ZVQ
DownloadVisualize
BU of 6zvq by Molmil
Complex between SMAD2 MH2 domain and peptide from Ski corepressor
分子名称: D(-)-TARTARIC ACID, GLYCEROL, Mothers against decapentaplegic homolog 2, ...
著者Purkiss, A.G, Kjaer, S, George, R, Hill, C.S.
登録日2020-07-27
公開日2021-06-09
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.03 Å)
主引用文献Mutations in SKI in Shprintzen-Goldberg syndrome lead to attenuated TGF-beta responses through SKI stabilization.
Elife, 10, 2021
6YRF
DownloadVisualize
BU of 6yrf by Molmil
Vip3Bc1 tetramer
分子名称: Vegetative insecticidal protein
著者Thompson, R.F, Byrne, M.J, Iadanza, M.I, Arribas Perez, M, Maskell, D.P, George, R.M, Hesketh, E.L, Beales, P.A, Zack, M.D, Berry, C.
登録日2020-04-20
公開日2021-03-17
最終更新日2024-05-22
実験手法ELECTRON MICROSCOPY (3.9 Å)
主引用文献Cryo-EM structures of an insecticidal Bt toxin reveal its mechanism of action on the membrane.
Nat Commun, 12, 2021
1Q31
DownloadVisualize
BU of 1q31 by Molmil
Crystal Structure of the Tobacco Etch Virus Protease C151A mutant
分子名称: BETA-MERCAPTOETHANOL, Nuclear inclusion protein A
著者Nunn, C.M, Djordjevic, S, George, R.R, Urquhart, G.T, Chao, L.H, Tsuchiya, Y.
登録日2003-07-28
公開日2004-11-02
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Crystal structure of tobacco etch virus protease shows the protein C terminus bound within the active site.
J.Mol.Biol., 350, 2005
1NAX
DownloadVisualize
BU of 1nax by Molmil
Thyroid receptor beta1 in complex with a beta-selective ligand
分子名称: Thyroid hormone receptor beta-1, {3,5-DICHLORO-4-[4-HYDROXY-3-(PROPAN-2-YL)PHENOXY]PHENYL}ACETIC ACID
著者Ye, L, Li, Y.L, Mellstrom, K, Mellin, C, Bladh, L.G, Koehler, K, Garg, N, Garcia Collazo, A.M, Litten, C, Husman, B, Persson, K, Ljunggren, J, Grover, G, Sleph, P.G, George, R, Malm, J.
登録日2002-11-29
公開日2003-06-17
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Thyroid receptor ligands. 1. Agonist ligands selective for the thyroid receptor beta1.
J.Med.Chem., 46, 2003
1NAV
DownloadVisualize
BU of 1nav by Molmil
Thyroid Receptor Alpha in complex with an agonist selective for Thyroid Receptor Beta1
分子名称: SULFATE ION, hormone receptor alpha 1, THRA1, ...
著者Ye, L, Li, Y.L, Mellstrom, K, Mellin, C, Bladh, L.G, Koehler, K, Garg, N, Garcia Collazo, A.M, Litten, C, Husman, B, Persson, K, Ljunggren, J, Grover, G, Sleph, P.G, George, R, Malm, J.
登録日2002-11-29
公開日2003-06-17
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Thyroid receptor ligands. 1. Agonist ligands selective for the thyroid receptor beta1.
J.Med.Chem., 46, 2003
8R3Q
DownloadVisualize
BU of 8r3q by Molmil
Transketolase from Plasmodium falciparum in complex with thiamin pyrophosphate
分子名称: 1,2-ETHANEDIOL, CITRIC ACID, MAGNESIUM ION, ...
著者Ballut, L, Georges, R.N, Aghajari, N, Hecquet, L, Charmantray, F, Doumeche, B.
登録日2023-11-10
公開日2024-05-22
実験手法X-RAY DIFFRACTION (1.88 Å)
主引用文献Are Transketolases relevant Targets fighting Human Pathogens? A comparative Biochemical, Bioinformatic and Structural Study
To Be Published
8QMF
DownloadVisualize
BU of 8qmf by Molmil
Transketolase from Vibrio vulnificus in complex with thiamin pyrophosphate
分子名称: 1,2-ETHANEDIOL, MAGNESIUM ION, NICKEL (II) ION, ...
著者Ballut, L, Georges, R.N, Octobre, G, Charmantray, F, Doumeche, B.
登録日2023-09-22
公開日2024-02-07
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Structural determination and kinetic analysis of the transketolase from Vibrio vulnificus reveal unexpected cooperative behavior.
Protein Sci., 33, 2024
8R3O
DownloadVisualize
BU of 8r3o by Molmil
Transketolase from Haemophilus influenzae in complex with thiamin pyrophosphate
分子名称: 1,2-ETHANEDIOL, CITRIC ACID, MAGNESIUM ION, ...
著者Ballut, L, Georges, R.N, Aghajari, N, Hecquet, L, Charmantray, F, Doumeche, B.
登録日2023-11-10
公開日2024-05-22
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Are Transketolases relevant Targets fighting Human Pathogens? A comparative Biochemical, Bioinformatic and Structural Study
To Be Published
8R3R
DownloadVisualize
BU of 8r3r by Molmil
Transketolase from Streptococcus pneumoniae in complex with thiamin pyrophosphate
分子名称: 1,2-ETHANEDIOL, MAGNESIUM ION, Probable transketolase, ...
著者Ballut, L, Georges, R.N, Aghajari, N, Hecquet, L, Charmantray, F, Doumeche, B.
登録日2023-11-10
公開日2024-05-22
実験手法X-RAY DIFFRACTION (2.35 Å)
主引用文献Are Transketolases relevant Targets fighting Human Pathogens? A comparative Biochemical, Bioinformatic and Structural Study
To Be Published
8R3P
DownloadVisualize
BU of 8r3p by Molmil
Transketolase from Enterococcus faecium in complex with thiamin pyrophosphate
分子名称: MAGNESIUM ION, THIAMINE DIPHOSPHATE, Transketolase
著者Ballut, L, Georges, R.N, Aghajari, N, Hecquet, L, Charmantray, F, Doumeche, B.
登録日2023-11-10
公開日2024-05-22
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Are Transketolases relevant Targets fighting Human Pathogens? A comparative Biochemical, Bioinformatic and Structural Study
To Be Published
6PTO
DownloadVisualize
BU of 6pto by Molmil
Structure of Ctf4 trimer in complex with three CMG helicases
分子名称: ADENOSINE-5'-TRIPHOSPHATE, Cell division control protein 45, DNA polymerase alpha-binding protein, ...
著者Yuan, Z, Georgescu, R, Bai, L, Santos, R, Donnell, M, Li, H.
登録日2019-07-16
公開日2019-11-20
最終更新日2019-12-18
実験手法ELECTRON MICROSCOPY (7 Å)
主引用文献Ctf4 organizes sister replisomes and Pol alpha into a replication factory.
Elife, 8, 2019
6PTN
DownloadVisualize
BU of 6ptn by Molmil
Structure of Ctf4 trimer in complex with two CMG helicases
分子名称: ADENOSINE-5'-TRIPHOSPHATE, Cell division control protein 45, DNA polymerase alpha-binding protein, ...
著者Yuan, Z, Georgescu, R, Bai, L, Santos, R, Donnell, M, Li, H.
登録日2019-07-16
公開日2019-11-20
最終更新日2019-12-18
実験手法ELECTRON MICROSCOPY (5.8 Å)
主引用文献Ctf4 organizes sister replisomes and Pol alpha into a replication factory.
Elife, 8, 2019
6PTJ
DownloadVisualize
BU of 6ptj by Molmil
Structure of Ctf4 trimer in complex with one CMG helicase
分子名称: Cell division control protein 45, DNA polymerase alpha-binding protein, DNA replication complex GINS protein PSF1, ...
著者Yuan, Z, Georgescu, R, Bai, L, Santos, R, Donnell, M, Li, H.
登録日2019-07-15
公開日2019-11-20
最終更新日2019-12-18
実験手法ELECTRON MICROSCOPY (3.8 Å)
主引用文献Ctf4 organizes sister replisomes and Pol alpha into a replication factory.
Elife, 8, 2019
8THC
DownloadVisualize
BU of 8thc by Molmil
Structure of the Saccharomyces cerevisiae clamp unloader Elg1-RFC bound to a cracked PCNA
分子名称: ADENOSINE-5'-DIPHOSPHATE, ELG1 isoform 1, MAGNESIUM ION, ...
著者Zheng, F, Yao, Y.N, Georgescu, R, O'Donnell, M.E, Li, H.
登録日2023-07-14
公開日2024-05-22
最終更新日2024-05-29
実験手法ELECTRON MICROSCOPY (3.67 Å)
主引用文献Structure of the PCNA unloader Elg1-RFC.
Sci Adv, 10, 2024
8THD
DownloadVisualize
BU of 8thd by Molmil
Structure of the Saccharomyces cerevisiae clamp unloader Elg1-RFC bound to PCNA
分子名称: ADENOSINE-5'-DIPHOSPHATE, ELG1 isoform 1, MAGNESIUM ION, ...
著者Zheng, F, Yao, Y.N, Georgescu, R, O'Donnell, M.E, Li, H.
登録日2023-07-14
公開日2024-05-22
最終更新日2024-05-29
実験手法ELECTRON MICROSCOPY (3.25 Å)
主引用文献Structure of the PCNA unloader Elg1-RFC.
Sci Adv, 10, 2024
8THB
DownloadVisualize
BU of 8thb by Molmil
Structure of the Saccharomyces cerevisiae PCNA clamp unloader Elg1-RFC complex
分子名称: ADENOSINE-5'-DIPHOSPHATE, ELG1 isoform 1, MAGNESIUM ION, ...
著者Zheng, F, Yao, Y.N, Georgescu, R, O'Donnell, M.E, Li, H.
登録日2023-07-14
公開日2024-05-22
最終更新日2024-05-29
実験手法ELECTRON MICROSCOPY (3.2 Å)
主引用文献Structure of the PCNA unloader Elg1-RFC.
Sci Adv, 10, 2024
2HNH
DownloadVisualize
BU of 2hnh by Molmil
Crystal structure of the catalytic alpha subunit of E. coli replicative DNA polymerase III
分子名称: DNA polymerase III alpha subunit, PHOSPHATE ION
著者Meindert, M.H, Georgescu, R.E, Lee, S, O'Donnell, M, Kuriyan, J.
登録日2006-07-12
公開日2006-09-19
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Crystal Structure of the Catalytic alpha Subunit of E. coli Replicative DNA Polymerase III.
Cell(Cambridge,Mass.), 126, 2006
7SH2
DownloadVisualize
BU of 7sh2 by Molmil
Structure of the yeast Rad24-RFC loader bound to DNA and the open 9-1-1 clamp
分子名称: ADENOSINE-5'-DIPHOSPHATE, Checkpoint protein RAD24, Crick strand, ...
著者Zheng, F, Georgescu, R, Yao, Y.N, O'Donnell, M.E, Li, H.
登録日2021-10-07
公開日2022-03-23
最終更新日2024-06-05
実験手法ELECTRON MICROSCOPY (3.23 Å)
主引用文献DNA is loaded through the 9-1-1 DNA checkpoint clamp in the opposite direction of the PCNA clamp.
Nat.Struct.Mol.Biol., 29, 2022

 

123>

224572

件を2024-09-04に公開中

PDB statisticsPDBj update infoContact PDBjnumon