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PDB: 160 件

8UDV
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The X-RAY co-crystal structure of human FGFR3 V555M and Compound 17
分子名称: 1,2-ETHANEDIOL, 3-[(6-chloro-1-cyclopropyl-1H-benzimidazol-5-yl)ethynyl]-1-[(3S,5S)-5-(methoxymethyl)-1-(prop-2-enoyl)pyrrolidin-3-yl]-5-(methylamino)-1H-pyrazole-4-carboxamide, Fibroblast growth factor receptor 3, ...
著者Tyhonas, J.S, Arnold, L.D, Cox, J, Franovic, A, Gardiner, E, Grandinetti, K, Kania, R, Kanouni, T, Lardy, M, Li, C, Martin, E.S, Miller, N, Mohan, A, Murphy, E.A, Perez, M, Soroceanu, L, Timple, N, Uryu, S, Womble, S, Kaldor, S.W.
登録日2023-09-29
公開日2024-02-07
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.348 Å)
主引用文献Discovery of KIN-3248, An Irreversible, Next Generation FGFR Inhibitor for the Treatment of Advanced Tumors Harboring FGFR2 and/or FGFR3 Gene Alterations.
J.Med.Chem., 67, 2024
8UDU
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The X-RAY co-crystal structure of human FGFR3 and Compound 17
分子名称: 3-[(6-chloro-1-cyclopropyl-1H-benzimidazol-5-yl)ethynyl]-1-[(3S,5S)-5-(methoxymethyl)-1-(prop-2-enoyl)pyrrolidin-3-yl]-5-(methylamino)-1H-pyrazole-4-carboxamide, CHLORIDE ION, Fibroblast growth factor receptor 3
著者Tyhonas, J.S, Arnold, L.D, Cox, J, Franovic, A, Gardiner, E, Grandinetti, K, Kania, R, Kanouni, T, Lardy, M, Li, C, Martin, E.S, Miller, N, Mohan, A, Murphy, E.A, Perez, M, Soroceanu, L, Timple, N, Uryu, S, Womble, S, Kaldor, S.W.
登録日2023-09-29
公開日2024-02-07
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.737 Å)
主引用文献Discovery of KIN-3248, An Irreversible, Next Generation FGFR Inhibitor for the Treatment of Advanced Tumors Harboring FGFR2 and/or FGFR3 Gene Alterations.
J.Med.Chem., 67, 2024
8UDT
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The X-RAY co-crystal structure of human FGFR3 and KIN-3248
分子名称: 3-[(1-cyclopropyl-4,6-difluoro-1H-benzimidazol-5-yl)ethynyl]-1-[(3R,5R)-5-(methoxymethyl)-1-propanoylpyrrolidin-3-yl]-5-(methylamino)-1H-pyrazole-4-carboxamide, D-MALATE, Fibroblast growth factor receptor 3
著者Tyhonas, J.S, Arnold, L.D, Cox, J, Franovic, A, Gardiner, E, Grandinetti, K, Kania, R, Kanouni, T, Lardy, M, Li, C, Martin, E.S, Miller, N, Mohan, A, Murphy, E.A, Perez, M, Soroceanu, L, Timple, N, Uryu, S, Womble, S, Kaldor, S.W.
登録日2023-09-29
公開日2024-02-07
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.829 Å)
主引用文献Discovery of KIN-3248, An Irreversible, Next Generation FGFR Inhibitor for the Treatment of Advanced Tumors Harboring FGFR2 and/or FGFR3 Gene Alterations.
J.Med.Chem., 67, 2024
3BNA
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REVERSIBLE BENDING AND HELIX GEOMETRY IN A B-DNA DODECAMER: CGCGAATTBRCGCG
分子名称: DNA (5'-D(*CP*GP*CP*GP*AP*AP*TP*TP*(CBR)P*GP*CP*G)-3')
著者Kopka, M.L, Fratini, A.V, Dickerson, R.E.
登録日1982-02-16
公開日1982-04-15
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Reversible bending and helix geometry in a B-DNA dodecamer: CGCGAATTBrCGCG.
J.Biol.Chem., 257, 1982
1MZ6
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Trypanosoma rangeli sialidase in complex with the inhibitor DANA
分子名称: 2-DEOXY-2,3-DEHYDRO-N-ACETYL-NEURAMINIC ACID, 2-acetamido-2-deoxy-beta-D-glucopyranose, sialidase
著者Buschiazzo, A, Tavares, G.A, Campetella, O, Spinelli, S, Cremona, M.L, Paris, G, Amaya, M.F, Frasch, A.C.C, Alzari, P.M.
登録日2002-10-05
公開日2002-10-16
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Structural basis of sialyltransferase activity in trypanosomal sialidases
Embo J., 19, 2000
1MZ5
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Trypanosoma rangeli sialidase
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, sialidase
著者Buschiazzo, A, Tavares, G.A, Campetella, O, Spinelli, S, Cremona, M.L, Paris, G, Amaya, M.F, Frasch, A.C.C, Alzari, P.M.
登録日2002-10-05
公開日2002-10-16
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structural basis of sialyltransferase activity in trypanosomal sialidases
Embo J., 19, 2000
1MLX
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Crystal Structure Analysis of a 2'-O-[2-(Methylthio)-ethyl]-Modified Oligodeoxynucleotide Duplex
分子名称: 5'-D(*GP*CP*GP*TP*AP*SMTP*AP*CP*GP*C)-3'
著者Prakash, T.P, Manoharan, M, Kawasaki, A.M, Fraser, A.S, Lesnik, E.A, Sioufi, N, Leeds, J.M, Teplova, M, Egli, M.
登録日2002-08-31
公開日2002-12-04
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (1.25 Å)
主引用文献2'-O-[2-(Methylthio)ethyl]-Modified Oligonucleotide: An Analogue of 2'-O-[2-(Methoxy)-ethyl]-Modified Oligonucleotide with Improved Protein Binding Properties and High Binding Affinity to Target RNA
Biochemistry, 41, 2002
1NMR
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BU of 1nmr by Molmil
Solution Structure of C-terminal Domain from Trypanosoma cruzi Poly(A)-Binding Protein
分子名称: poly(A)-binding protein
著者Siddiqui, N, Kozlov, G, D'Orso, I, Trempe, J.F, Frasch, A.C.C, Gehring, K.
登録日2003-01-10
公開日2003-09-09
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Solution Structure of the C-terminal Domain from poly(A)-binding protein in Trypanosoma cruzi: A vegetal PABC domain
Protein Sci., 12, 2003
1MS5
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Triclinic form of Trypanosoma cruzi trans-sialidase, soaked with N-acetylneuraminyl-a-2,3-thio-galactoside (NA-S-Gal)
分子名称: trans-sialidase
著者Buschiazzo, A, Amaya, M.F, Cremona, M.L, Frasch, A.C, Alzari, P.M.
登録日2002-09-19
公開日2003-03-25
最終更新日2021-10-27
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献The crystal structure and mode of action of trans-sialidase, a key enzyme in Trypanosoma cruzi pathogenesis
Mol.Cell, 10, 2002
1MS0
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Monoclinic form of Trypanosoma cruzi trans-sialidase, in complex with 3-deoxy-2,3-dehydro-N-acetylneuraminic acid (DANA)and lactose
分子名称: 2-DEOXY-2,3-DEHYDRO-N-ACETYL-NEURAMINIC ACID, beta-D-galactopyranose-(1-4)-beta-D-glucopyranose, trans-sialidase
著者Buschiazzo, A, Amaya, M.F, Cremona, M.L, Frasch, A.C, Alzari, P.M.
登録日2002-09-19
公開日2003-03-25
最終更新日2021-10-27
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献The crystal structure and mode of action of trans-sialidase, a key enzyme in Trypanosoma cruzi pathogenesis
Mol.Cell, 10, 2002
1MS3
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Monoclinic form of Trypanosoma cruzi trans-sialidase
分子名称: trans-sialidase
著者Buschiazzo, A, Amaya, M.F, Cremona, M.L, Frasch, A.C, Alzari, P.M.
登録日2002-09-19
公開日2003-03-25
最終更新日2021-10-27
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献The crystal structure and mode of action of trans-sialidase, a key enzyme in Trypanosoma cruzi pathogenesis
Mol.Cell, 10, 2002
1MS4
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BU of 1ms4 by Molmil
Triclinic form of Trypanosoma cruzi trans-sialidase
分子名称: trans-sialidase
著者Buschiazzo, A, Amaya, M.F, Cremona, M.L, Frasch, A.C, Alzari, P.M.
登録日2002-09-19
公開日2003-03-25
最終更新日2021-10-27
実験手法X-RAY DIFFRACTION (2.21 Å)
主引用文献The crystal structure and mode of action of trans-sialidase, a key enzyme in Trypanosoma cruzi pathogenesis
Mol.Cell, 10, 2002
1MS9
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Triclinic form of Trypanosoma cruzi trans-sialidase, in complex with lactose
分子名称: beta-D-galactopyranose-(1-4)-beta-D-glucopyranose, trans-sialidase
著者Buschiazzo, A, Amaya, M.F, Cremona, M.L, Frasch, A.C, Alzari, P.M.
登録日2002-09-19
公開日2003-03-25
最終更新日2021-10-27
実験手法X-RAY DIFFRACTION (1.58 Å)
主引用文献The crystal structure and mode of action of trans-sialidase, a key enzyme of Trypanosoma cruzi pathogenesis
Mol.Cell, 10, 2002
4BNA
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BU of 4bna by Molmil
REVERSIBLE BENDING AND HELIX GEOMETRY IN A B-DNA DODECAMER: CGCGAATTBRCGCG
分子名称: DNA (5'-D(*CP*GP*CP*GP*AP*AP*TP*TP*(CBR)P*GP*CP*G)-3')
著者Kopka, M.L, Fratini, A.V, Dickerson, R.E.
登録日1982-02-16
公開日1982-04-15
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Reversible bending and helix geometry in a B-DNA dodecamer: CGCGAATTBrCGCG.
J.Biol.Chem., 257, 1982
1MS1
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BU of 1ms1 by Molmil
Monoclinic form of Trypanosoma cruzi trans-sialidase, in complex with 3-deoxy-2,3-dehydro-N-acetylneuraminic acid (DANA)
分子名称: 2-DEOXY-2,3-DEHYDRO-N-ACETYL-NEURAMINIC ACID, GLYCEROL, trans-sialidase
著者Buschiazzo, A, Amaya, M.F, Cremona, M.L, Frasch, A.C, Alzari, P.M.
登録日2002-09-19
公開日2003-03-25
最終更新日2021-10-27
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献The crystal structure and mode of action of trans-sialidase, a key enzyme in Trypanosoma cruzi pathogenesis
Mol.Cell, 10, 2002
1MR5
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Orthorhombic form of Trypanosoma cruzi trans-sialidase
分子名称: trans-sialidase
著者Buschiazzo, A, Amaya, M.F, Cremona, M.L, Frasch, A.C, Alzari, P.M.
登録日2002-09-18
公開日2003-03-18
最終更新日2021-10-27
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献The crystal structure and mode of action of trans-sialidase, a key enzyme in Trypanosoma cruzi pathogenesis
Mol.Cell, 10, 2002
1MS8
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Triclinic form of Trypanosoma cruzi trans-sialidase, in complex with 3-deoxy-2,3-dehydro-N-acetylneuraminic acid (DANA)
分子名称: 2-DEOXY-2,3-DEHYDRO-N-ACETYL-NEURAMINIC ACID, trans-sialidase
著者Buschiazzo, A, Amaya, M.F, Cremona, M.L, Frasch, A.C, Alzari, P.M.
登録日2002-09-19
公開日2003-03-25
最終更新日2021-10-27
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献The crystal structure and mode of action of trans-sialidase, a key enzyme in Trypanosoma cruzi pathogenesis
Mol.Cell, 10, 2002
1MNB
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BIV TAT PEPTIDE (RESIDUES 68-81), NMR, MINIMIZED AVERAGE STRUCTURE
分子名称: BIV TAR RNA, BIV TAT PEPTIDE
著者Puglisi, J.D, Chen, L, Blanchard, S, Frankel, A.D.
登録日1996-07-25
公開日1997-01-27
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Solution structure of a bovine immunodeficiency virus Tat-TAR peptide-RNA complex.
Science, 270, 1995
6QDW
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BU of 6qdw by Molmil
Cryo-EM structure of the 50S ribosomal subunit at 2.83 Angstroms with modeled GBC SecM peptide
分子名称: 23S rRNA, 50S ribosomal protein L13, 50S ribosomal protein L14, ...
著者Schulte, L, Reitz, J, Hodirnau, V.V, Kudlinzki, D, Mao, J, Glaubitz, C, Frangakis, A, Schwalbe, H.
登録日2019-01-03
公開日2020-01-15
最終更新日2020-12-02
実験手法ELECTRON MICROSCOPY (2.83 Å)
主引用文献Cysteine oxidation and disulfide formation in the ribosomal exit tunnel.
Nat Commun, 11, 2020
4CSD
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BU of 4csd by Molmil
Structure of Monomeric Ralstonia solanacearum lectin
分子名称: FUCOSE-BINDING LECTIN PROTEIN, GLYCEROL, methyl alpha-L-fucopyranoside
著者Arnaud, J, Trundle, K, Claudinon, J, Audfray, A, Varrot, A, Romer, W, Imberty, A.
登録日2014-03-06
公開日2014-10-08
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (1.35 Å)
主引用文献Membrane Deformation by Neolectins with Engineered Glycolipid Binding Sites.
Angew.Chem.Int.Ed.Engl., 53, 2014
1ZBN
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Solution structure of BIV TAR hairpin complexed to JDV Tat arginine-rich motif
分子名称: BIV mRNA, JDV tat protein
著者Calabro, V, Daugherty, M.D, Frankel, A.D.
登録日2005-04-08
公開日2005-04-19
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献A single intermolecular contact mediates intramolecular stabilization of both RNA and protein.
Proc.Natl.Acad.Sci.Usa, 102, 2005
4LUZ
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Fragment-Based Discovery of a Potent Inhibitor of Replication Protein A Protein-Protein Interactions
分子名称: 5-(4-{[4-(5-carboxyfuran-2-yl)benzyl]oxy}phenyl)-1-(3-methylphenyl)-1H-pyrazole-3-carboxylic acid, Replication protein A 70 kDa DNA-binding subunit
著者Feldkamp, M.D, Frank, A.O, Kennedy, J.P, Waterson, A.G, Olejnczak, E.O, Pelz, N.F, Patrone, J.D, Vangamudi, B, Camper, D.V, Rossanese, O.W, Fesik, S.W, Chazin, W.J.
登録日2013-07-25
公開日2013-12-11
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Discovery of a potent inhibitor of replication protein a protein-protein interactions using a fragment-linking approach.
J.Med.Chem., 56, 2013
4NB3
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Crystal structure of RPA70N in complex with a 3,4 dichlorophenylalanine ATRIP derived peptide
分子名称: 3,4 dichlorophenylalanine ATRIP derived peptide, Replication protein A 70 kDa DNA-binding subunit
著者Feldkamp, M.D, Frank, A.O, Vangamudi, B, Souza-Fagundes, E.M, Luzwik, J.W, Cortez, D, Olejniczak, O.T, Waterson, A.G, Rossanese, O.W, Fesik, S.W, Chazin, W.J.
登録日2013-10-22
公開日2014-02-26
最終更新日2024-07-10
実験手法X-RAY DIFFRACTION (1.35 Å)
主引用文献Discovery of a Potent Stapled Helix Peptide That Binds to the 70N Domain of Replication Protein A.
J.Med.Chem., 57, 2014
2CE6
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Structure of Helix Pomatia agglutinin with no ligands
分子名称: HELIX POMATIA AGGLUTININ
著者Sanchez, J.-F, Lescar, J, Chazalet, V, Audfray, A, Gautier, C, Gagnon, J, Breton, C, Imberty, A, Mitchell, E.P.
登録日2006-02-03
公開日2006-05-15
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Biochemical and Structural Analysis of Helix Pomatia Agglutinin. A Hexameric Lectin with a Novel Fold.
J.Biol.Chem., 281, 2006
4PMI
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Crystal structure of Rev and Rev-response-element RNA complex
分子名称: PHOSPHATE ION, Protein Rev, Rev-Response-Element RNA
著者Jayaraman, B, Crosby, D.C, Homer, C, Ribeiro, I, Mavor, D, Frankel, A.D.
登録日2014-05-21
公開日2014-12-24
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献RNA-directed remodeling of the HIV-1 protein Rev orchestrates assembly of the Rev-Rev response element complex.
Elife, 4, 2014

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