4PMI

Crystal structure of Rev and Rev-response-element RNA complex

Summary for 4PMI

DescriptorRev-Response-Element RNA, Protein Rev, PHOSPHATE ION, ... (4 entities in total)
Functional Keywordsprotein-rna complex, helix-loop-helix, hiv, nuclear export, rna binding protein-rna complex, rna binding protein/rna
Biological sourceHuman immunodeficiency virus type 1 group M subtype B (HIV-1)
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Total number of polymer chains3
Total molecular weight29795.51
Authors
Jayaraman, B.,Crosby, D.C.,Homer, C.,Ribeiro, I.,Mavor, D.,Frankel, A.D. (deposition date: 2014-05-21, release date: 2014-12-24, Last modification date: 2019-02-13)
Primary citation
Jayaraman, B.,Crosby, D.C.,Homer, C.,Ribeiro, I.,Mavor, D.,Frankel, A.D.
RNA-directed remodeling of the HIV-1 protein Rev orchestrates assembly of the Rev-Rev response element complex.
Elife, 4:e04120-e04120, 2014
PubMed: 25486594 (PDB entries with the same primary citation)
DOI: 10.7554/eLife.04120
MImport into Mendeley
Experimental method
X-RAY DIFFRACTION (3.2 Å)
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Structure validation

RfreeClashscoreRamachandran outliersSidechain outliersRSRZ outliersRNA backbone 0.214300 0.7% 0.71MetricValuePercentile RanksWorseBetterPercentile relative to all X-ray structuresPercentile relative to X-ray structures of similar resolution

More Asymmetric unit images

Molmil generated image of 4pmi
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Molmil generated image of 4pmi
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Molmil generated image of 4pmi
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More Biological unit images

Molmil generated image of 4pmi
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Molmil generated image of 4pmi
rotated about x axis by 90°
Molmil generated image of 4pmi
rotated about y axis by 90°
(*)In the case of coarse surface representation, the asymmetric unit is shown as red ribbon representation.
Coordinate files for Biological unit (4pmi.pdb2.gz [445.62 KB])
Coordinate files for Biological unit (4pmi.pdb1.gz [223.79 KB])