Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 427 results

3T3Z
DownloadVisualize
BU of 3t3z by Molmil
Human Cytochrome P450 2E1 in complex with pilocarpine
Descriptor: (3S,4R)-3-ethyl-4-[(1-methyl-1H-imidazol-5-yl)methyl]dihydrofuran-2(3H)-one, Cytochrome P450 2E1, PROTOPORPHYRIN IX CONTAINING FE, ...
Authors:Meneely, K.M, DeVore, N.M, Scott, E.E.
Deposit date:2011-07-25
Release date:2011-12-07
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Structural comparison of cytochromes P450 2A6, 2A13, and 2E1 with pilocarpine.
Febs J., 279, 2012
1MDN
DownloadVisualize
BU of 1mdn by Molmil
WILD TYPE MYOGLOBIN WITH CO
Descriptor: PROTEIN (MYOGLOBIN), PROTOPORPHYRIN IX CONTAINING FE
Authors:Murshudov, G.N, Krzywda, S, Brzozowski, A.M, Jaskolski, M, Scott, E.E, Klizas, S.A, Gibson, Q.H, Olson, J.S, Wilkinson, A.J.
Deposit date:1998-08-12
Release date:1998-09-30
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.98 Å)
Cite:Stabilizing bound O2 in myoglobin by valine68 (E11) to asparagine substitution.
Biochemistry, 37, 1998
1M6M
DownloadVisualize
BU of 1m6m by Molmil
V68N MET MYOGLOBIN
Descriptor: PROTEIN (MYOGLOBIN), PROTOPORPHYRIN IX CONTAINING FE
Authors:Murshudov, G.N, Krzywda, S, Brzozowski, A.M, Jaskolski, M, Scott, E.E, Klizas, S.A, Gibson, Q.H, Olson, J.S, Wilkinson, A.J.
Deposit date:1998-08-13
Release date:1998-08-19
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Stabilizing bound O2 in myoglobin by valine68 (E11) to asparagine substitution.
Biochemistry, 37, 1998
1M6C
DownloadVisualize
BU of 1m6c by Molmil
V68N MYOGLOBIN WITH CO
Descriptor: CARBON MONOXIDE, PROTEIN (MYOGLOBIN), PROTOPORPHYRIN IX CONTAINING FE
Authors:Murshudov, G.N, Krzywda, S, Brzozowski, A.M, Jaskolski, M, Scott, E.E, Klizas, S.A, Gibson, Q.H, Olson, J.S, Wilkinson, A.J.
Deposit date:1998-08-12
Release date:1998-08-19
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Stabilizing bound O2 in myoglobin by valine68 (E11) to asparagine substitution.
Biochemistry, 37, 1998
1KCE
DownloadVisualize
BU of 1kce by Molmil
E. COLI THYMIDYLATE SYNTHASE MUTANT E58Q IN COMPLEX WITH CB3717 AND 2'-DEOXYURIDINE 5'-MONOPHOSPHATE (DUMP)
Descriptor: 10-PROPARGYL-5,8-DIDEAZAFOLIC ACID, 2'-DEOXYURIDINE 5'-MONOPHOSPHATE, THYMIDYLATE SYNTHASE
Authors:Sage, C.R, Rutenber, E.E, Stout, T.J, Stroud, R.M.
Deposit date:1996-10-22
Release date:1997-04-21
Last modified:2024-06-05
Method:X-RAY DIFFRACTION (2 Å)
Cite:An essential role for water in an enzyme reaction mechanism: the crystal structure of the thymidylate synthase mutant E58Q.
Biochemistry, 35, 1996
1MWC
DownloadVisualize
BU of 1mwc by Molmil
WILD TYPE MYOGLOBIN WITH CO
Descriptor: CARBON MONOXIDE, PROTEIN (MYOGLOBIN), PROTOPORPHYRIN IX CONTAINING FE
Authors:Murshudov, G.N, Krzywda, S, Brzozowski, A.M, Jaskolski, M, Scott, E.E, Klizas, S.A, Gibson, Q.H, Olson, J.S, Wilkinson, A.J.
Deposit date:1998-08-12
Release date:1998-08-19
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Stabilizing bound O2 in myoglobin by valine68 (E11) to asparagine substitution.
Biochemistry, 37, 1998
1MWD
DownloadVisualize
BU of 1mwd by Molmil
WILD TYPE DEOXY MYOGLOBIN
Descriptor: PROTEIN (MYOGLOBIN), PROTOPORPHYRIN IX CONTAINING FE
Authors:Murshudov, G.N, Krzywda, S, Brzozowski, A.M, Jaskolski, M, Scott, E.E, Klizas, A.A, Gibson, Q.H, Olson, J.S, Wilkinson, A.J.
Deposit date:1998-08-11
Release date:1998-08-19
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Stabilizing bound O2 in myoglobin by valine68 (E11) to asparagine substitution.
Biochemistry, 37, 1998
1P9M
DownloadVisualize
BU of 1p9m by Molmil
Crystal structure of the hexameric human IL-6/IL-6 alpha receptor/gp130 complex
Descriptor: Interleukin-6, Interleukin-6 receptor alpha chain, Interleukin-6 receptor beta chain
Authors:Boulanger, M.J, Chow, D.C, Brevnova, E.E, Garcia, K.C.
Deposit date:2003-05-12
Release date:2003-07-01
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (3.65 Å)
Cite:Hexameric Structure and Assembly of the Interleukin-6/IL-6 alpha-Receptor/gp130 Complex
Science, 300, 2003
1MNO
DownloadVisualize
BU of 1mno by Molmil
V68N MYOGLOBIN OXY FORM
Descriptor: OXYGEN MOLECULE, PROTEIN (MYOGLOBIN), PROTOPORPHYRIN IX CONTAINING FE
Authors:Murshudov, G.N, Krzywda, S, Brzozowski, A.M, Jaskolski, M, Scott, E.E, Klizas, S.A, Gibson, Q.H, Olson, J.S, Wilkinson, A.J.
Deposit date:1998-08-13
Release date:1998-08-19
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Stabilizing bound O2 in myoglobin by valine68 (E11) to asparagine substitution.
Biochemistry, 37, 1998
1OOP
DownloadVisualize
BU of 1oop by Molmil
The Crystal Structure of Swine Vesicular Disease Virus
Descriptor: Coat protein VP1, Coat protein VP2, Coat protein VP3, ...
Authors:Fry, E.E, Knowles, N.J, Newman, J.W.I, Wilsden, G, Rao, Z, King, A.M.Q, Stuart, D.I.
Deposit date:2003-03-04
Release date:2003-04-22
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (3 Å)
Cite:Crystal Structure of Swine Vesicular Disease Virus and Implications for Host Adaptation
J.Virol., 77, 2003
1EXJ
DownloadVisualize
BU of 1exj by Molmil
CRYSTAL STRUCTURE OF TRANSCRIPTION ACTIVATOR BMRR, FROM B. SUBTILIS, BOUND TO 21 BASE PAIR BMR OPERATOR AND TPP
Descriptor: DNA (5'-D(*AP*CP*CP*CP*TP*CP*CP*CP*CP*TP*TP*AP*GP*GP*GP*GP*AP*GP*GP*GP*T)-3'), MULTIDRUG-EFFLUX TRANSPORTER REGULATOR, SODIUM ION, ...
Authors:Zheleznova-Heldwein, E.E, Brennan, R.G.
Deposit date:2000-05-02
Release date:2001-01-24
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (3 Å)
Cite:Crystal structure of the transcription activator BmrR bound to DNA and a drug.
Nature, 409, 2001
1EXI
DownloadVisualize
BU of 1exi by Molmil
CRYSTAL STRUCTURE OF TRANSCRIPTION ACTIVATOR BMRR, FROM B. SUBTILIS, BOUND TO 21 BASE PAIR BMR OPERATOR AND TPSB
Descriptor: DNA (5'-D(*AP*CP*CP*CP*TP*CP*CP*CP*CP*TP*TP*AP*GP*GP*GP*GP*AP*GP*GP*GP*T)-3'), MULTIDRUG-EFFLUX TRANSPORTER REGULATOR, TETRAPHENYLANTIMONIUM ION, ...
Authors:Zheleznova-Heldwein, E.E, Brennan, R.G.
Deposit date:2000-05-02
Release date:2001-01-24
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (3.12 Å)
Cite:Crystal structure of the transcription activator BmrR bound to DNA and a drug.
Nature, 409, 2001
1BOW
DownloadVisualize
BU of 1bow by Molmil
MULTIDRUG-BINDING DOMAIN OF TRANSCRIPTION ACTIVATOR BMRR (APO FORM)
Descriptor: MANGANESE (II) ION, MULTIDRUG-EFFLUX TRANSPORTER 1 REGULATOR BMRR
Authors:Zheleznova, E.E, Markham, P.N, Neyfakh, A.A, Brennan, R.G.
Deposit date:1998-08-06
Release date:1999-08-06
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structural basis of multidrug recognition by BmrR, a transcription activator of a multidrug transporter.
Cell(Cambridge,Mass.), 96, 1999
7Z3Z
DownloadVisualize
BU of 7z3z by Molmil
Locked Wuhan SARS-CoV2 Prefusion Spike ectodomain with lipid bound
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, STEARIC ACID, ...
Authors:Duyvesteyn, H.M.E, Carrique, L, Ren, J, Stuart, D.I, Fry, E.E.
Deposit date:2022-03-03
Release date:2022-05-04
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:The SARS-CoV-2 Spike harbours a lipid binding pocket which modulates stability of the prefusion trimer
bioRxiv, 2020
2KU0
DownloadVisualize
BU of 2ku0 by Molmil
Inhibitor Induced Structural Change in the HCV IRES Domain IIa RNA
Descriptor: (7S)-7-[(dimethylamino)methyl]-1-[3-(dimethylamino)propyl]-7,8-dihydro-1H-furo[3,2-e]benzimidazol-2-amine, HCV IRES Domain IIa RNA
Authors:Paulsen, R.B, Seth, P.P, Swayze, E.E, Griffey, R.H, Skalicky, J.J, Cheatham III, T.E, Davis, D.R.
Deposit date:2010-02-10
Release date:2010-04-28
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Inhibitor-induced structural change in the HCV IRES domain IIa RNA.
Proc.Natl.Acad.Sci.USA, 107, 2010
2KNE
DownloadVisualize
BU of 2kne by Molmil
Calmodulin wraps around its binding domain in the plasma membrane CA2+ pump anchored by a novel 18-1 motif
Descriptor: ATPase, Ca++ transporting, plasma membrane 4, ...
Authors:Juranic, N, Atanasova, E, Filoteo, A.G, Macura, S, Prendergast, F.G, Penniston, J.T, Strehler, E.E.
Deposit date:2009-08-21
Release date:2009-11-24
Last modified:2024-05-08
Method:SOLUTION NMR
Cite:Calmodulin wraps around its binding domain in the plasma membrane Ca2+ pump anchored by a novel 18-1 motif.
J.Biol.Chem., 285, 2010
1R9K
DownloadVisualize
BU of 1r9k by Molmil
Representative solution structure of the catalytic domain of SopE2
Descriptor: TypeIII-secreted protein effector: invasion-associated protein
Authors:Williams, C, Galyov, E.E, Bagby, S.
Deposit date:2003-10-30
Release date:2004-09-28
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Solution Structure, Backbone Dynamics, and Interaction with Cdc42 of Salmonella Guanine Nucleotide Exchange Factor SopE2(,).
Biochemistry, 43, 2004
2MIU
DownloadVisualize
BU of 2miu by Molmil
Structure of FHL2 LIM adaptor and its Interaction with Ski
Descriptor: Four and a half LIM domains protein 2, ZINC ION
Authors:Yang, Y, Sun, Y, Medrano, E.E, Tian, X, Weiss, M.A.
Deposit date:2013-12-20
Release date:2014-01-15
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Structure of FHL2 LIM adaptor and its Interaction with Ski
To be Published
2JOL
DownloadVisualize
BU of 2jol by Molmil
Average NMR structure of the catalytic domain of guanine nucleotide exchange factor BopE from Burkholderia pseudomallei
Descriptor: Putative G-nucleotide exchange factor
Authors:Wu, H, Upadhyay, A, Williams, C, Galyov, E.E, van den Elsen, J.M.H, Bagby, S.
Deposit date:2007-03-14
Release date:2007-03-27
Last modified:2023-12-20
Method:SOLUTION NMR
Cite:The guanine-nucleotide-exchange factor BopE from Burkholderia pseudomallei adopts a compact version of the Salmonella SopE/SopE2 fold and undergoes a closed-to-open conformational change upon interaction with Cdc42
Biochem.J., 411, 2008
2JOK
DownloadVisualize
BU of 2jok by Molmil
NMR structure of the catalytic domain of guanine nucleotide exchange factor BopE from Burkholderia pseudomallei
Descriptor: Putative G-nucleotide exchange factor
Authors:Wu, H, Upadhyay, A, Williams, C, Galyov, E.E, van den Elsen, J.M.H, Bagby, S.
Deposit date:2007-03-14
Release date:2007-09-18
Last modified:2023-12-20
Method:SOLUTION NMR
Cite:The guanine-nucleotide-exchange factor BopE from Burkholderia pseudomallei adopts a compact version of the Salmonella SopE/SopE2 fold and undergoes a closed-to-open conformational change upon interaction with Cdc42
Biochem.J., 411, 2008
1SNM
DownloadVisualize
BU of 1snm by Molmil
ACTIVE SITE MUTANT GLU-43 (RIGHT ARROW) ASP IN STAPHYLOCOCCAL NUCLEASE DISPLAYS NONLOCAL STRUCTURAL CHANGES
Descriptor: CALCIUM ION, THERMONUCLEASE PRECURSOR, THYMIDINE-3',5'-DIPHOSPHATE
Authors:Loll, P.J, Lattman, E.E.
Deposit date:1990-02-15
Release date:1991-07-15
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.74 Å)
Cite:Active site mutant Glu-43 --> Asp in staphylococcal nuclease displays nonlocal structural changes.
Biochemistry, 29, 1990
1PO5
DownloadVisualize
BU of 1po5 by Molmil
Structure of mammalian cytochrome P450 2B4
Descriptor: Cytochrome P450 2B4, PROTOPORPHYRIN IX CONTAINING FE
Authors:Scott, E.E, He, Y.A, Wester, M.R, White, M.A, Chin, C.C, Halpert, J.R, Johnson, E.F, Stout, C.D.
Deposit date:2003-06-13
Release date:2003-10-07
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:An open conformation of mammalian cytochrome P450 2B4 at 1.6 A resolution
Proc.Natl.Acad.Sci.USA, 100, 2003
2K6U
DownloadVisualize
BU of 2k6u by Molmil
The Solution Structure of a Conformationally Restricted Fully Active Derivative of the Human Relaxin-like Factor (RLF)
Descriptor: Insulin-like 3 A chain, Insulin-like 3 B chain
Authors:Bullesbach, E.E, Hass, M.A.S, Jensen, M.R, Hansen, D.F, Kristensen, S.M, Schwabe, C, Led, J.J.
Deposit date:2008-07-24
Release date:2008-12-16
Last modified:2021-11-10
Method:SOLUTION NMR
Cite:Solution structure of a conformationally restricted fully active derivative of the human relaxin-like factor
Biochemistry, 47, 2008
2OHO
DownloadVisualize
BU of 2oho by Molmil
Structural Basis for Glutamate Racemase Inhibitor
Descriptor: Glutamate Racemase, SULFATE ION
Authors:Kim, E.E.
Deposit date:2007-01-10
Release date:2007-09-25
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Structural basis for glutamate racemase inhibition
J.Mol.Biol., 372, 2007
2KCE
DownloadVisualize
BU of 2kce by Molmil
BINDING OF THE ANTICANCER DRUG ZD1694 TO E. COLI THYMIDYLATE SYNTHASE: ASSESSING SPECIFICITY AND AFFINITY
Descriptor: 2'-DEOXYURIDINE 5'-MONOPHOSPHATE, THYMIDYLATE SYNTHASE, TOMUDEX
Authors:Rutenber, E.E, Stroud, R.M.
Deposit date:1997-06-09
Release date:1997-11-19
Last modified:2024-06-05
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Binding of the anticancer drug ZD1694 to E. coli thymidylate synthase: assessing specificity and affinity.
Structure, 4, 1996

223166

PDB entries from 2024-07-31

PDB statisticsPDBj update infoContact PDBjnumon