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PDB: 428 results

5C4W
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Crystal structure of coxsackievirus A16
Descriptor: CHLORIDE ION, POTASSIUM ION, SODIUM ION, ...
Authors:Ren, J, Wang, X, Zhu, L, Hu, Z, Gao, Q, Yang, P, Li, X, Wang, J, Shen, X, Fry, E.E, Rao, Z, Stuart, D.I.
Deposit date:2015-06-18
Release date:2015-08-26
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:Structures of Coxsackievirus A16 Capsids with Native Antigenicity: Implications for Particle Expansion, Receptor Binding, and Immunogenicity.
J.Virol., 89, 2015
5C9A
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BU of 5c9a by Molmil
Crystal structure of empty coxsackievirus A16 particle
Descriptor: CHLORIDE ION, POTASSIUM ION, SPHINGOSINE, ...
Authors:Ren, J, Wang, X, Zhu, L, Hu, Z, Gao, Q, Yang, P, Li, X, Wang, J, Shen, X, Fry, E.E, Rao, Z, Stuart, D.I.
Deposit date:2015-06-26
Release date:2015-08-26
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structures of Coxsackievirus A16 Capsids with Native Antigenicity: Implications for Particle Expansion, Receptor Binding, and Immunogenicity.
J.Virol., 89, 2015
3NW8
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BU of 3nw8 by Molmil
Glycoprotein B from Herpes simplex virus type 1, Y179S mutant, high-pH
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CHLORIDE ION, ...
Authors:Stampfer, S.D, Lou, H, Cohen, G.H, Eisenberg, R.J, Heldwein, E.E.
Deposit date:2010-07-09
Release date:2010-12-01
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.75915 Å)
Cite:Structural basis of local, pH-dependent conformational changes in glycoprotein B from herpes simplex virus type 1.
J.Virol., 84, 2010
4QPI
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BU of 4qpi by Molmil
Crystal structure of hepatitis A virus
Descriptor: CHLORIDE ION, Capsid protein VP1, Capsid protein VP2, ...
Authors:Wang, X, Ren, J, Gao, Q, Hu, Z, Sun, Y, Li, X, Rowlands, D.J, Yin, W, Wang, J, Stuart, D.I, Rao, Z, Fry, E.E.
Deposit date:2014-06-23
Release date:2014-10-15
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (3.01 Å)
Cite:Hepatitis A virus and the origins of picornaviruses.
Nature, 517, 2015
8EOH
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BU of 8eoh by Molmil
crystal structure of human Cytochrome P450 8B1 in complex with a C12-Pyridine Containing Steroid
Descriptor: 12-(pyridin-3-yl)-8alpha,10alpha,13alpha,14beta-androsta-4,11-diene-3,17-dione, 7-alpha-hydroxycholest-4-en-3-one 12-alpha-hydroxylase, PROTOPORPHYRIN IX CONTAINING FE
Authors:Liu, J, Scott, E.E.
Deposit date:2022-10-03
Release date:2023-08-02
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:Pyridine-containing substrate analogs are restricted from accessing the human cytochrome P450 8B1 active site by tryptophan 281.
J.Biol.Chem., 299, 2023
8FDA
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BU of 8fda by Molmil
Human Cytochrome P450 17A1 in complex with steroidal isonitrile inhibitor
Descriptor: PROTOPORPHYRIN IX CONTAINING FE, Steroid 17-alpha-hydroxylase/17,20 lyase, [(1~{R})-1-[(3~{S},5~{S},8~{R},9~{S},10~{S},13~{S},17~{R})-3-methanoyloxy-10,13-dimethyl-1,2,3,4,5,6,7,8,9,11,12,13,14,15,16,17-hexadecahydrocyclopenta[a]phenanthren-17-yl]ethyl]-methylidyne-azanium
Authors:Richard, A.M, Scott, E.E.
Deposit date:2022-12-02
Release date:2023-08-23
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Selective steroidogenic cytochrome P450 haem iron ligation by steroid-derived isonitriles.
Commun Chem, 6, 2023
7T7I
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BU of 7t7i by Molmil
EBV nuclear egress complex
Descriptor: Nuclear egress protein 1, Nuclear egress protein 2, ZINC ION
Authors:Thorsen, M.K, Heldwein, E.E.
Deposit date:2021-12-15
Release date:2022-07-06
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (3.97 Å)
Cite:The nuclear egress complex of Epstein-Barr virus buds membranes through an oligomerization-driven mechanism.
Plos Pathog., 18, 2022
4U4H
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BU of 4u4h by Molmil
Crystal Structure of HSV-1 UL21 N-terminal Domain
Descriptor: Tegument protein UL21
Authors:Metrick, C.M, Heldwein, E.E.
Deposit date:2014-07-23
Release date:2015-01-07
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:The Unusual Fold of Herpes Simplex Virus 1 UL21, a Multifunctional Tegument Protein.
J.Virol., 89, 2015
8GK3
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BU of 8gk3 by Molmil
Cytochrome P450 3A7 in complex with Dehydroepiandrosterone sulfate
Descriptor: 17-oxoandrost-5-en-3beta-yl hydrogen sulfate, Cytochrome P450 3A7, PROTOPORPHYRIN IX CONTAINING FE
Authors:Liu, J, Scott, E.E.
Deposit date:2023-03-16
Release date:2023-07-26
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Human cytochrome P450 3A7 binding four copies of its native substrate dehydroepiandrosterone 3-sulfate.
J.Biol.Chem., 299, 2023
5JIU
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BU of 5jiu by Molmil
The crystal structure of RanBPM/9 IUS-SPRY domain in complex with DDX-4 peptide
Descriptor: CHLORIDE ION, Probable ATP-dependent RNA helicase DDX4, Ran-binding protein 9
Authors:Hong, S.K, Kim, K.-H, Kim, E.E.
Deposit date:2016-04-22
Release date:2016-11-09
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.054 Å)
Cite:Structural Basis for the Interaction between the IUS-SPRY Domain of RanBPM and DDX-4 in Germ Cell Development.
J.Mol.Biol., 428, 2016
5JIA
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BU of 5jia by Molmil
The Crystal Structure Of IUS-SPRY Domain From RanBP10
Descriptor: IMIDAZOLE, Ran-binding protein 10
Authors:Hong, S.K, Kim, K.-H, Kim, E.E.
Deposit date:2016-04-22
Release date:2016-11-09
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural Basis for the Interaction between the IUS-SPRY Domain of RanBPM and DDX-4 in Germ Cell Development.
J.Mol.Biol., 428, 2016
6M9A
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BU of 6m9a by Molmil
Bordetella pertussis globin coupled sensor regulatory domain (BpeGReg)
Descriptor: CALCIUM ION, HYDROGEN PEROXIDE, PROTOPORPHYRIN IX CONTAINING FE, ...
Authors:Rivera, S.R, Hoffer, E.D, Dunham, C.M, Weinert, E.E.
Deposit date:2018-08-23
Release date:2018-11-14
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural Insights into Oxygen-Dependent Signal Transduction within Globin Coupled Sensors.
Inorg Chem, 57, 2018
6U96
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BU of 6u96 by Molmil
Actin phalloidin at BeFx state
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Actin, alpha skeletal muscle, ...
Authors:Das, S, Ge, P, Durer, Z.A.O, Grintsevich, E.E, Zhou, Z.H, Reisler, E.
Deposit date:2019-09-06
Release date:2020-05-13
Last modified:2020-05-20
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:D-loop Dynamics and Near-Atomic-Resolution Cryo-EM Structure of Phalloidin-Bound F-Actin.
Structure, 28, 2020
6UDL
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BU of 6udl by Molmil
Structure of Human Cytochrome P450 1A1 with Duocarmycin Prodrug (S) ICT-2700
Descriptor: Cytochrome P450 1A1, PROTOPORPHYRIN IX CONTAINING FE, [(1S)-1-(chloromethyl)-1,6-dihydropyrrolo[3,2-e]indol-3(2H)-yl](5-methoxy-1H-indol-2-yl)methanone
Authors:Bart, A.G, Scott, E.E.
Deposit date:2019-09-19
Release date:2020-09-23
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.85 Å)
Cite:Cytochrome P450 binding and bioactivation of tumor-targeted duocarmycin agents
Drug Metab.Dispos., 2021
6UDM
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BU of 6udm by Molmil
Structure of Human Cytochrome P450 1A1 with Duocarmycin Prodrug (S) ICT-2726
Descriptor: 3-[(3-CHOLAMIDOPROPYL)DIMETHYLAMMONIO]-1-PROPANESULFONATE, Cytochrome P450 1A1, PROTOPORPHYRIN IX CONTAINING FE, ...
Authors:Bart, A.G, Scott, E.E.
Deposit date:2019-09-19
Release date:2020-09-23
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (3.075 Å)
Cite:Cytochrome P450 binding and bioactivation of tumor-targeted duocarmycin agents
Drug Metab.Dispos., 2021
6M7X
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BU of 6m7x by Molmil
Structure of human CYP11B1 in complex with fadrozole
Descriptor: 4-[(5S)-5,6,7,8-tetrahydroimidazo[1,5-a]pyridin-5-yl]benzonitrile, Cytochrome P450 11B1, mitochondrial, ...
Authors:Scott, E.E, Brixius-Anderko, S.
Deposit date:2018-08-21
Release date:2018-11-21
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.095 Å)
Cite:Structure of human cortisol-producing cytochrome P450 11B1 bound to the breast cancer drug fadrozole provides insights for drug design.
J. Biol. Chem., 294, 2019
6MJ1
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BU of 6mj1 by Molmil
Crystal structure of RefZ (regulator of FtsZ) from Bacillus subtilis
Descriptor: Probable HTH-type transcriptional regulator YttP
Authors:Krieger, I.V, Brown, E.E, Herman, J.K, Sacchettini, J.C.
Deposit date:2018-09-20
Release date:2019-03-20
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:A DNA-Binding Protein Tunes Septum Placement during Bacillus subtilis Sporulation.
J.Bacteriol., 201, 2019
6TI6
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BU of 6ti6 by Molmil
Mixing Abeta(1-40) and Abeta(1-42) peptides generates unique amyloid fibrils
Descriptor: Amyloid-beta precursor protein
Authors:Cerofolini, L, Ravera, E, Bologna, S, Wiglenda, T, Boddrich, A, Purfurst, B, Benilova, A, Korsak, M, Gallo, G, Rizzo, D, Gonnelli, L, Fragai, M, De Strooper, B, Wanker, E.E, Luchinat, C.
Deposit date:2019-11-21
Release date:2020-07-22
Last modified:2024-06-19
Method:SOLID-STATE NMR
Cite:Mixing A beta (1-40) and A beta (1-42) peptides generates unique amyloid fibrils.
Chem.Commun.(Camb.), 56, 2020
5JI7
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BU of 5ji7 by Molmil
The Crystal Structure Of IUS-SPRY Domain From RanBPM/9
Descriptor: Ran-binding protein 9
Authors:Hong, S.K, Kim, K.-H, Kim, E.E.
Deposit date:2016-04-22
Release date:2016-11-09
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.51 Å)
Cite:Structural Basis for the Interaction between the IUS-SPRY Domain of RanBPM and DDX-4 in Germ Cell Development.
J.Mol.Biol., 428, 2016
5JI9
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BU of 5ji9 by Molmil
The Crystal Structure Of IUS-SPRY Domain From RanBPM/9
Descriptor: Ran-binding protein 9
Authors:Hong, S.K, Kim, K.-H, Kim, E.E.
Deposit date:2016-04-22
Release date:2016-11-09
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structural Basis for the Interaction between the IUS-SPRY Domain of RanBPM and DDX-4 in Germ Cell Development.
J.Mol.Biol., 428, 2016
6NZ8
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BU of 6nz8 by Molmil
Structure of carbamylated apo OXA-231 carbapenemase
Descriptor: Beta-lactamase OXA-231, CHLORIDE ION, SODIUM ION
Authors:Favaro, D.C, Llontop, E.E, Vasconcelos, F.N, Antunes, V.U, Farah, S.C, Lincopan, N.
Deposit date:2019-02-13
Release date:2020-02-19
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:Importance of the beta 5-beta 6 Loop for the Structure, Catalytic Efficiency, and Stability of Carbapenem-Hydrolyzing Class D beta-Lactamase Subfamily OXA-143.
Biochemistry, 58, 2019
2WFF
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BU of 2wff by Molmil
Equine Rhinitis A Virus
Descriptor: P1
Authors:Fry, E.E, Tuthill, T.J, Harlos, K, Walter, T.S, Knowles, N.J, Gropelli, E, Rowlands, D.J, Stuart, D.I.
Deposit date:2009-04-05
Release date:2010-05-05
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (4 Å)
Cite:Equine Rhinitis a Virus and its Low Ph Empty Particle: Clues Towards an Aphthovirus Entry Mechanism?
Plos Pathog., 5, 2009
6OYV
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BU of 6oyv by Molmil
Structure of an ancestral-reconstructed cytochrome P450 1B1 with estradiol
Descriptor: Cytochrome P450 1B1, ESTRADIOL, PROTOPORPHYRIN IX CONTAINING FE
Authors:Bart, A.G, Scott, E.E.
Deposit date:2019-05-15
Release date:2020-03-18
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (3.101 Å)
Cite:Structure of an ancestral mammalian family 1B1 cytochrome P450 with increased thermostability.
J.Biol.Chem., 295, 2020
6OYU
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BU of 6oyu by Molmil
Structure of an ancestral-reconstructed cytochrome P450 1B1 with alpha-naphthoflavone
Descriptor: 2-PHENYL-4H-BENZO[H]CHROMEN-4-ONE, Cytochrome P450 1B1, GLYCEROL, ...
Authors:Bart, A.G, Harris, K.L, Scott, E.E.
Deposit date:2019-05-15
Release date:2020-03-18
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.95 Å)
Cite:Structure of an ancestral mammalian family 1B1 cytochrome P450 with increased thermostability.
J.Biol.Chem., 295, 2020
2WS9
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Equine Rhinitis A Virus at Low pH
Descriptor: P1
Authors:Fry, E.E, Tuthill, T.J, Harlos, K, Walter, T.S, Knowles, N.J, Gropelli, E, Rowlands, D.J, Stuart, D.I.
Deposit date:2009-09-04
Release date:2010-08-25
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (3 Å)
Cite:Equine Rhinitis a Virus and its Low Ph Empty Particle: Clues Towards an Aphthovirus Entry Mechanism?
Plos Pathog., 5, 2009

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