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PDB: 41371 results

8C1Y
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BU of 8c1y by Molmil
Small molecule stabilizer for 14-3-3/ChREBP (Cmd 30)
Descriptor: 14-3-3 protein sigma, Carbohydrate-responsive element-binding protein, [2-[2-[[2,2-bis(fluoranyl)-2-phenyl-ethyl]amino]-2-oxidanylidene-ethoxy]phenyl]phosphonic acid
Authors:Pennings, M.A.M, Visser, E.J, Ottmann, C.
Deposit date:2022-12-21
Release date:2024-05-01
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Molecular glues of the regulatory ChREBP/14-3-3 complex protect beta cells from glucolipotoxicity.
Biorxiv, 2024
5L7U
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BU of 5l7u by Molmil
Crystal structure of BvGH123 with bound GalNAc
Descriptor: 2-acetamido-2-deoxy-beta-D-galactopyranose, CHLORIDE ION, Glycoside hydrolase
Authors:Roth, C, Petricevic, M, John, A, Goddard-Borger, E.D, Davies, G.J, Williams, S.J.
Deposit date:2016-06-03
Release date:2017-03-22
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural and mechanistic insights into a Bacteroides vulgatus retaining N-acetyl-beta-galactosaminidase that uses neighbouring group participation.
Chem. Commun. (Camb.), 52, 2016
6TCV
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BU of 6tcv by Molmil
Crystal structure of Bacteroides thetaiotamicron EndoBT-3987 in complex with Man9GlcNAc2Asn substrate
Descriptor: ASPARAGINE, Endo-beta-N-acetylglucosaminidase F1, GLYCEROL, ...
Authors:Trastoy, B, Du, J.J, Klontz, E.H, Cifuente, J.O, Sundberg, E.J, Guerin, M.E.
Deposit date:2019-11-06
Release date:2020-02-26
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.311 Å)
Cite:Structural basis of mammalian high-mannose N-glycan processing by human gut Bacteroides.
Nat Commun, 11, 2020
8BVX
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BU of 8bvx by Molmil
Structure of the mouse 8-oxoguanine DNA Glycosylase mOGG1 in complex with ligand TH13264
Descriptor: 1,2-ETHANEDIOL, N-glycosylase/DNA lyase, NICKEL (II) ION, ...
Authors:Scaletti, E, Stenmark, P.
Deposit date:2022-12-05
Release date:2024-05-15
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Structure of the mouse 8-oxoguanine DNA Glycosylase mOGG1 in complex with ligand TH13264
To Be Published
8VPN
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BU of 8vpn by Molmil
Phosphorylated human NCC in complex with indapamide
Descriptor: 4-chloro-N-[(2S)-2-methyl-2,3-dihydro-1H-indol-1-yl]-3-sulfamoylbenzamide, ADENOSINE-5'-TRIPHOSPHATE, Solute carrier family 12 member 3
Authors:Zhao, Y.X, Cao, E.H.
Deposit date:2024-01-16
Release date:2024-09-04
Last modified:2024-10-16
Method:ELECTRON MICROSCOPY (2.7 Å)
Cite:Structural bases for Na + -Cl - cotransporter inhibition by thiazide diuretic drugs and activation by kinases.
Nat Commun, 15, 2024
8CHA
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BU of 8cha by Molmil
Fc gamma RIIa 27W/131H variant ectodomain
Descriptor: 1,2-DIMETHOXYETHANE, 2-[2-(2-ethoxyethoxy)ethoxy]ethanol, 3,6,9,12,15,18-HEXAOXAICOSANE, ...
Authors:Foy, E.G, Thomsen, M, Goldman, A, Robinson, J.I.
Deposit date:2023-02-07
Release date:2024-05-22
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (1.81 Å)
Cite:Fc gamma RIIa 27W/131H variant ectodomain
To Be Published
8BWN
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BU of 8bwn by Molmil
Crystal structure of human Twisted gastrulation protein homolog 1 (TWSG1) in complex with human Growth Differentiation Factor 5 (GDF5) and calcium, long-wavelength X-ray dataset (4010 eV)
Descriptor: CALCIUM ION, Growth/differentiation factor 5, Twisted gastrulation protein homolog 1
Authors:Malinauskas, T, Rudolf, A.F, Moore, G, Eggington, H, Belnoue-Davis, H, El Omari, K, Woolley, R.E, Griffiths, S.C, Duman, R, Wagner, A, Leedham, S.J, Baldock, C, Ashe, H, Siebold, C.
Deposit date:2022-12-07
Release date:2024-06-19
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (2.57 Å)
Cite:Molecular mechanism of BMP signal control by Twisted gastrulation.
Nat Commun, 15, 2024
8BWL
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BU of 8bwl by Molmil
Crystal structure of human Twisted gastrulation protein homolog 1 (TWSG1) in complex with human Growth Differentiation factor 5 (GDF5) and calcium
Descriptor: CALCIUM ION, Growth/differentiation factor 5, Twisted gastrulation protein homolog 1
Authors:Malinauskas, T, Rudolf, A.F, Moore, G, Eggington, H, Belnoue-Davis, H, El Omari, K, Woolley, R.E, Griffiths, S.C, Duman, R, Wagner, A, Leedham, S.J, Baldock, C, Ashe, H, Siebold, C.
Deposit date:2022-12-06
Release date:2024-06-19
Method:X-RAY DIFFRACTION (1.96 Å)
Cite:Molecular mechanism of BMP signal control by Twisted gastrulation.
Nat Commun, 15, 2024
8BWM
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BU of 8bwm by Molmil
Crystal structure of human Twisted gastrulation protein homolog 1 (TWSG1) in complex with human Growth Differentiation factor 5 (GDF5) and calcium, long-wavelength X-ray dataset (4042 eV)
Descriptor: CALCIUM ION, Growth/differentiation factor 5, Twisted gastrulation protein homolog 1
Authors:Malinauskas, T, Rudolf, A.F, Moore, G, Eggington, H, Belnoue-Davis, H, El Omari, K, Woolley, R.E, Griffiths, S.C, Duman, R, Wagner, A, Leedham, S.J, Baldock, C, Ashe, H, Siebold, C.
Deposit date:2022-12-07
Release date:2024-06-19
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Molecular mechanism of BMP signal control by Twisted gastrulation.
Nat Commun, 15, 2024
8BZG
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BU of 8bzg by Molmil
FC-31 stabilizer of 14-3-3 and ERalpha
Descriptor: 14-3-3 protein sigma, ERalpha peptide, Fusicoccin 31, ...
Authors:Visser, E.J, Ottmann, C.
Deposit date:2022-12-14
Release date:2024-06-26
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (1.49 Å)
Cite:Stabilization of the Estrogen receptor alpha - 14-3-3 interaction as a potential intervention strategy for endocrine resistance in breast cancer
To Be Published
7Q6X
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BU of 7q6x by Molmil
OleP mutant S240Y in complex with 6DEB
Descriptor: 6-DEOXYERYTHRONOLIDE B, Cytochrome P-450, FORMIC ACID, ...
Authors:Savino, C, Montemiglio, L.C, Vallone, B, Exertier, C, Freda, I, Gugole, E.
Deposit date:2021-11-09
Release date:2022-01-26
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Point Mutations at a Key Site Alter the Cytochrome P450 OleP Structural Dynamics.
Biomolecules, 12, 2021
7Q89
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BU of 7q89 by Molmil
OleP mutant G92W in complex with 6DEB
Descriptor: 6-DEOXYERYTHRONOLIDE B, Cytochrome P-450, FORMIC ACID, ...
Authors:Savino, C, Montemiglio, L.C, Vallone, B, Exertier, C, Freda, I, Gugole, E.
Deposit date:2021-11-10
Release date:2022-01-26
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.08 Å)
Cite:Point Mutations at a Key Site Alter the Cytochrome P450 OleP Structural Dynamics.
Biomolecules, 12, 2021
8BWA
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BU of 8bwa by Molmil
Crystal structure of human Twisted gastrulation protein homolog 1 (TWSG1) in complex with platinum
Descriptor: PLATINUM (II) ION, Twisted gastrulation protein homolog 1
Authors:Malinauskas, T, Rudolf, A.F, Moore, G, Eggington, H, Belnoue-Davis, H, El Omari, K, Woolley, R.E, Griffiths, S.C, Duman, R, Wagner, A, Leedham, S.J, Baldock, C, Ashe, H, Siebold, C.
Deposit date:2022-12-06
Release date:2024-06-19
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (3.61 Å)
Cite:Molecular mechanism of BMP signal control by Twisted gastrulation.
Nat Commun, 15, 2024
5KTI
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BU of 5kti by Molmil
Structure of cow mincle complexed with KMJ1
Descriptor: 2,3-dimethoxybenzoic acid, CALCIUM ION, TRIETHYLENE GLYCOL, ...
Authors:Feinberg, H, Rambaruth, N.D.S, Jegouzo, S.A.F, Jacobsen, K.M, Djurhuus, R, Poulsen, T.B, Taylor, M.E, Drickamer, K, Weis, W.I.
Deposit date:2016-07-11
Release date:2016-08-31
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Binding Sites for Acylated Trehalose Analogs of Glycolipid Ligands on an Extended Carbohydrate Recognition Domain of the Macrophage Receptor Mincle.
J.Biol.Chem., 291, 2016
8SNI
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BU of 8sni by Molmil
Hydroxynitrile Lyase from Hevea brasiliensis with Forty Mutations
Descriptor: (S)-hydroxynitrile lyase, 1,2-ETHANEDIOL, BENZOIC ACID, ...
Authors:Walsh, M.E, Greenberg, L.R, Kazlauskas, R.J, Pierce, C.T, Aihara, H, Evans, R.L, Shi, K.
Deposit date:2023-04-27
Release date:2024-02-28
Method:X-RAY DIFFRACTION (1.99 Å)
Cite:To be published
To Be Published
5KTP
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BU of 5ktp by Molmil
Crystal structure of Pyrococcus horikoshii quinolinate synthase (NadA) with bound itaconate and Fe4S4 cluster
Descriptor: 2-methylidenebutanedioic acid, AMMONIUM ION, CHLORIDE ION, ...
Authors:Fenwick, M.K, Ealick, S.E.
Deposit date:2016-07-12
Release date:2016-07-27
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.542 Å)
Cite:Crystal Structures of the Iron-Sulfur Cluster-Dependent Quinolinate Synthase in Complex with Dihydroxyacetone Phosphate, Iminoaspartate Analogues, and Quinolinate.
Biochemistry, 55, 2016
8C0L
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BU of 8c0l by Molmil
FC-THF stabilizer of 14-3-3 and ERalpha
Descriptor: 14-3-3 protein sigma, ERalpha peptide, Fusicoccin A-THF
Authors:Visser, E.J, Ottmann, C.
Deposit date:2022-12-17
Release date:2024-07-10
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Stabilization of the Estrogen receptor alpha - 14-3-3 interaction as a potential intervention strategy for endocrine resistance in breast cancer
To Be Published
5KUB
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BU of 5kub by Molmil
Bacillus cereus DNA glycosylase AlkD bound to 7-methylguanine nucleobase and DNA containing an oxocarbenium-intermediate analog
Descriptor: 2-amino-7-methyl-1,7-dihydro-6H-purin-6-one, DNA (5'-D(*CP*CP*CP*GP*AP*(NRI)P*AP*GP*TP*CP*CP*G)-3'), DNA (5'-D(*CP*GP*GP*AP*CP*TP*CP*TP*CP*GP*GP*G)-3'), ...
Authors:Mullins, E.A, Eichman, B.F.
Deposit date:2016-07-13
Release date:2016-09-14
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.73 Å)
Cite:A Catalytic Role for C-H/ pi Interactions in Base Excision Repair by Bacillus cereus DNA Glycosylase AlkD.
J.Am.Chem.Soc., 138, 2016
8C0P
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BU of 8c0p by Molmil
Crystal structure of S. aureus BlaR1 sensor domain in complex with a boronate inhibitor
Descriptor: Regulatory protein BlaR1, [1-[[2,4-bis(trifluoromethyl)phenyl]methyl]benzimidazol-2-yl]sulfanylmethyl-$l^{3}-oxidanyl-bis(oxidanyl)boron
Authors:Miguel-Ruano, V, Jimenez-Faraco, E, Hermoso, J.A.
Deposit date:2022-12-19
Release date:2024-07-10
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (1.97 Å)
Cite:Restoring susceptibility to beta-lactam antibiotics in methicillin-resistant Staphylococcus aureus.
Nat.Chem.Biol., 2024
7Q6R
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BU of 7q6r by Molmil
OleP mutant E89Y in complex with 6DEB
Descriptor: 6-DEOXYERYTHRONOLIDE B, Cytochrome P-450, FORMIC ACID, ...
Authors:Savino, C, Montemiglio, L.C, Vallone, B, Exertier, C, Freda, I, Gugole, E.
Deposit date:2021-11-09
Release date:2022-01-26
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.44 Å)
Cite:Point Mutations at a Key Site Alter the Cytochrome P450 OleP Structural Dynamics.
Biomolecules, 12, 2021
4XBO
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BU of 4xbo by Molmil
Crystal structure of full length E.coli TrmJ in complex with SAH
Descriptor: S-ADENOSYL-L-HOMOCYSTEINE, tRNA (cytidine/uridine-2'-O-)-methyltransferase TrmJ
Authors:Liu, R.J, Long, T, Zhou, M, Wang, E.D.
Deposit date:2014-12-17
Release date:2015-12-23
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:tRNA recognition by a bacterial tRNA Xm32 modification enzyme from the SPOUT methyltransferase superfamily
Nucleic Acids Res., 43, 2015
7TB9
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BU of 7tb9 by Molmil
Structural characterization of the biological synthetic peptide pCEMP1
Descriptor: CEMP1-p1
Authors:Lopez Giraldo, A, del Rio Portilla, F, Nidome Campos, M, Romo Arevalo, E, Arzate, H.
Deposit date:2021-12-21
Release date:2023-01-18
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Solution NMR structure of cementum protein 1 derived peptide (CEMP1-p1) and its role in the mineralization process.
J.Pept.Sci., 29, 2023
6THM
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BU of 6thm by Molmil
Linalool Dehydratase Isomerase M125A mutant
Descriptor: 1,2-ETHANEDIOL, Linalool dehydratase-isomerase protein LDI, MALONATE ION
Authors:Cuetos, A, Zukic, E, Danesh-Azari, H.R, Grogan, G.
Deposit date:2019-11-20
Release date:2020-10-07
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.99 Å)
Cite:Mutational Analysis of Linalool Dehydratase Isomerase Suggests That Alcohol and Alkene Transformations Are Catalyzed Using Noncovalent Mechanisms
Acs Catalysis, 2020
5ZMA
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BU of 5zma by Molmil
Structural basis for an allosteric Eya2 phosphatase inhibitor
Descriptor: 3-fluoro-N'-[(E)-{5-[(pyrimidin-2-yl)sulfanyl]furan-2-yl}methylidene]benzohydrazide, Eyes absent homolog 2
Authors:Anantharajan, J, Jansson, A.E, Kang, C.
Deposit date:2018-04-02
Release date:2019-06-05
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (3.175 Å)
Cite:Structural and Functional Analyses of an Allosteric EYA2 Phosphatase Inhibitor That Has On-Target Effects in Human Lung Cancer Cells.
Mol.Cancer Ther., 18, 2019
8W2J
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BU of 8w2j by Molmil
Human liver phosphofructokinase-1 filament in the T-state conformation
Descriptor: 1,6-di-O-phosphono-beta-D-fructofuranose, ADENOSINE-5'-TRIPHOSPHATE, ATP-dependent 6-phosphofructokinase, ...
Authors:Lynch, E.M, Kollman, J.M, Webb, B.A.
Deposit date:2024-02-20
Release date:2024-09-11
Last modified:2024-09-25
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Structural basis for allosteric regulation of human phosphofructokinase-1.
Nat Commun, 15, 2024

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PDB entries from 2024-11-13

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