Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 40736 results

6OSX
DownloadVisualize
BU of 6osx by Molmil
Crystal structure of uncharacterized protein ECL_02694
Descriptor: ACETATE ION, DI(HYDROXYETHYL)ETHER, Protein YmbA, ...
Authors:Chang, C, Evdokimova, E, Savchenko, A, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2019-05-02
Release date:2019-05-15
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Crystal structure of uncharacterized protein ECL_02694
To Be Published
8ED0
DownloadVisualize
BU of 8ed0 by Molmil
Cryo-EM Structure of the P74-26 Tail Tube
Descriptor: Tail Tube Protein gp93
Authors:Agnello, E, Pajak, J, Liu, X, Kelch, B.
Deposit date:2022-09-02
Release date:2023-03-08
Last modified:2024-06-19
Method:ELECTRON MICROSCOPY (2.72 Å)
Cite:Conformational dynamics control assembly of an extremely long bacteriophage tail tube.
J.Biol.Chem., 299, 2023
5IS0
DownloadVisualize
BU of 5is0 by Molmil
Structure of TRPV1 in complex with capsazepine, determined in lipid nanodisc
Descriptor: Transient receptor potential cation channel subfamily V member 1, capsazepine
Authors:Gao, Y, Cao, E, Julius, D, Cheng, Y.
Deposit date:2016-03-15
Release date:2016-05-25
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (3.43 Å)
Cite:TRPV1 structures in nanodiscs reveal mechanisms of ligand and lipid action.
Nature, 534, 2016
8EDX
DownloadVisualize
BU of 8edx by Molmil
Cryo-EM Structure of P74-26 tail-like tubes
Descriptor: Tail Tube Protein gp93
Authors:Agnello, E, Pajak, J, Liu, X, Kelch, B.
Deposit date:2022-09-06
Release date:2023-03-08
Last modified:2024-06-19
Method:ELECTRON MICROSCOPY (2.81 Å)
Cite:Conformational dynamics control assembly of an extremely long bacteriophage tail tube.
J.Biol.Chem., 299, 2023
7OKV
DownloadVisualize
BU of 7okv by Molmil
Crystal structure of soluble EPCR after exposure to the nonionic surfactant Polysorbate 20
Descriptor: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, DECANE, ...
Authors:Erausquin, E, Dichiara, M.G, Lopez-Sagaseta, J.
Deposit date:2021-05-18
Release date:2022-07-06
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Identification of a broad lipid repertoire associated to the endothelial cell protein C receptor (EPCR).
Sci Rep, 12, 2022
6OT9
DownloadVisualize
BU of 6ot9 by Molmil
Bimetallic dodecameric cage design 1 (BMC1) from cytochrome cb562
Descriptor: ACETOHYDROXAMIC ACID, FE (III) ION, HEME C, ...
Authors:Golub, E, Esselborn, J, Bailey, J.B, Tezcan, F.A.
Deposit date:2019-05-02
Release date:2020-01-29
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Constructing protein polyhedra via orthogonal chemical interactions.
Nature, 578, 2020
4WPM
DownloadVisualize
BU of 4wpm by Molmil
Structure of the Chaetomium thermophilum Mex67:Mtr2 Complex
Descriptor: SULFATE ION, mRNA export protein
Authors:Aibara, S, Valkov, E, Stewart, M.
Deposit date:2014-10-20
Release date:2015-07-15
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structural characterization of the principal mRNA-export factor Mex67-Mtr2 from Chaetomium thermophilum.
Acta Crystallogr.,Sect.F, 71, 2015
4WQ2
DownloadVisualize
BU of 4wq2 by Molmil
Human calpain PEF(S) with (Z)-3-(6-bromondol-3-yl)-2-mercaptoacrylic acid bound
Descriptor: (2Z)-3-(6-bromo-1H-indol-3-yl)-2-sulfanylprop-2-enoic acid, 1,2-ETHANEDIOL, CALCIUM ION, ...
Authors:Adams, S.E, Rizkallah, P.J, Miller, D.J, Hallett, M.B, Allemann, R.K.
Deposit date:2014-10-21
Release date:2015-09-02
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.64 Å)
Cite:Conformationally restricted calpain inhibitors.
Chem Sci, 6, 2015
8G4W
DownloadVisualize
BU of 8g4w by Molmil
Cryo-EM consensus structure of Escherichia coli que-PEC (paused elongation complex) RNA Polymerase plus preQ1 ligand
Descriptor: 7-DEAZA-7-AMINOMETHYL-GUANINE, DNA (31-MER), DNA (39-mer), ...
Authors:Porta, J.C, Chauvier, A, Deb, I, Ellinger, E, Frank, A.T, Meze, K, Ohi, M.D, Walter, N.G.
Deposit date:2023-02-10
Release date:2023-06-21
Last modified:2024-06-19
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:Structural basis for control of bacterial RNA polymerase pausing by a riboswitch and its ligand.
Nat.Struct.Mol.Biol., 30, 2023
7P4K
DownloadVisualize
BU of 7p4k by Molmil
Soluble epoxide hydrolase in complex with FL217
Descriptor: Bifunctional epoxide hydrolase 2, ~{N}-[[4-(cyclopropylsulfonylamino)-2-(trifluoromethyl)phenyl]methyl]-1-[(3-fluorophenyl)methyl]indole-5-carboxamide
Authors:Ni, X, Kramer, J.S, Lillich, F, Proschak, E, Chaikuad, A, Knapp, S, Structural Genomics Consortium (SGC)
Deposit date:2021-07-11
Release date:2022-07-06
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Structure-Based Design of Dual Partial Peroxisome Proliferator-Activated Receptor gamma Agonists/Soluble Epoxide Hydrolase Inhibitors.
J.Med.Chem., 64, 2021
8E51
DownloadVisualize
BU of 8e51 by Molmil
Crystal Structure of Iridescent Shark Catfish Cadherin-23 EC1-2 and Protocadherin-15 EC1-2
Descriptor: CALCIUM ION, Cadherin-23, POTASSIUM ION, ...
Authors:Scheib, E, Nisler, C.R, Sotomayor, M.
Deposit date:2022-08-19
Release date:2023-03-22
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.594 Å)
Cite:Interpreting the Evolutionary Echoes of a Protein Complex Essential for Inner-Ear Mechanosensation.
Mol.Biol.Evol., 40, 2023
6J5G
DownloadVisualize
BU of 6j5g by Molmil
Complex structure of MAb 4.2-scFv with tick-borne encephalitis virus envelope protein
Descriptor: Envelope protein E, antibody heavy chain, antibody light chain
Authors:Yang, X, Qi, J, Peng, R, Dai, L, Gould, E.A, Tien, P, Gao, G.F.
Deposit date:2019-01-10
Release date:2019-02-06
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (3.291 Å)
Cite:Molecular Basis of a Protective/Neutralizing Monoclonal Antibody Targeting Envelope Proteins of both Tick-Borne Encephalitis Virus and Louping Ill Virus.
J. Virol., 93, 2019
2AU0
DownloadVisualize
BU of 2au0 by Molmil
Unmodified preinsertion binary complex
Descriptor: 5'-D(*CP*TP*AP*AP*CP*G*CP*TP*AP*CP*CP*AP*TP*CP*CP*AP*AP*CP*C)-3', 5'-D(*GP*GP*TP*TP*GP*GP*AP*TP*GP*GP*TP*AP*(DDG))-3', CALCIUM ION, ...
Authors:Rechkoblit, O, Malinina, L, Cheng, Y, Kuryavyi, V, Broyde, S, Geacintov, N.E, Patel, D.J.
Deposit date:2005-08-26
Release date:2006-01-10
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Stepwise Translocation of Dpo4 Polymerase during Error-Free Bypass of an oxoG Lesion
Plos Biol., 4, 2006
3GLY
DownloadVisualize
BU of 3gly by Molmil
REFINED CRYSTAL STRUCTURES OF GLUCOAMYLASE FROM ASPERGILLUS AWAMORI VAR. X100
Descriptor: GLUCOAMYLASE-471, alpha-D-mannopyranose, alpha-D-mannopyranose-(1-2)-alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-6)]alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Aleshin, A.E, Hoffman, C, Firsov, L.M, Honzatko, R.B.
Deposit date:1994-06-03
Release date:1994-11-01
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Refined crystal structures of glucoamylase from Aspergillus awamori var. X100.
J.Mol.Biol., 238, 1994
6OEF
DownloadVisualize
BU of 6oef by Molmil
PolyAla Model of the O-layer from the Type 4 Secretion System of H. pylori
Descriptor: PolyAla Model of OMCC O-Layer
Authors:Chung, J.M, Sheedlo, M.J, Campbell, A, Sawhney, N, Frick-Cheng, A.E, Lacy, D.B, Cover, T.L, Ohi, M.D.
Deposit date:2019-03-27
Release date:2019-07-03
Last modified:2024-03-13
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:Structure of the Helicobacter pylori Cag type IV secretion system.
Elife, 8, 2019
1BEN
DownloadVisualize
BU of 1ben by Molmil
INSULIN COMPLEXED WITH 4-HYDROXYBENZAMIDE
Descriptor: 4-HYDROXYBENZAMIDE, CHLORIDE ION, HUMAN INSULIN, ...
Authors:Smith, G.D, Ciszak, E, Pangborn, W.
Deposit date:1996-02-15
Release date:1996-07-11
Last modified:2024-06-05
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:A novel complex of a phenolic derivative with insulin: structural features related to the T-->R transition.
Protein Sci., 5, 1996
5I0V
DownloadVisualize
BU of 5i0v by Molmil
IRON AND COPPER-BOUND P19 FROM CAMPYLOBACTER JEJUNI UNDER OXIDIZING CONDITIONS
Descriptor: CHLORIDE ION, COPPER (II) ION, FE (III) ION, ...
Authors:Chan, A.C, Murphy, M.E.
Deposit date:2016-02-04
Release date:2017-02-08
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:A copper site is required for iron transport by the periplasmic proteins P19 and FetP.
Metallomics, 12, 2020
5B6M
DownloadVisualize
BU of 5b6m by Molmil
Crystal structure of human peroxiredoxin 6 in reduced state
Descriptor: Peroxiredoxin-6
Authors:Kim, K.H, Lee, W.T, Kim, E.E.
Deposit date:2016-05-30
Release date:2016-07-13
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.496 Å)
Cite:Crystal structures of human peroxiredoxin 6 in different oxidation states
Biochem.Biophys.Res.Commun., 477, 2016
2R0I
DownloadVisualize
BU of 2r0i by Molmil
Crystal structure of a kinase MARK2/Par-1 mutant
Descriptor: Serine/threonine-protein kinase MARK2
Authors:Panneerselvam, S, Marx, A, Mandelkow, E.-M, Mandelkow, E.
Deposit date:2007-08-20
Release date:2008-08-26
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.202 Å)
Cite:Crystal structure of a kinase MARK2/Par-1 mutant
To be Published
6LR6
DownloadVisualize
BU of 6lr6 by Molmil
The crystal structure of human cytoplasmic LRS
Descriptor: 4-Chloro-3-aminomethyl-7-[ethoxy]-3H-benzo[C][1,2]oxaborol-1-ol modified adenosine, 5'-O-(L-leucylsulfamoyl)adenosine, Leucine--tRNA ligase, ...
Authors:Liu, R.J, Long, T, Li, H, Li, J, Zhao, J.H, Lin, J.Z, Palencia, A, Wang, M.Z, Cusack, S, Wang, E.D.
Deposit date:2020-01-15
Release date:2020-03-25
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (3.009 Å)
Cite:Molecular basis of the multifaceted functions of human leucyl-tRNA synthetase in protein synthesis and beyond.
Nucleic Acids Res., 48, 2020
8DMI
DownloadVisualize
BU of 8dmi by Molmil
Lymphocytic choriomeningitis virus glycoprotein
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Glycoprotein G1, ...
Authors:Moon-Walker, A, Hastie, K.M, Zyla, D.S, Saphire, E.O.
Deposit date:2022-07-08
Release date:2023-04-12
Last modified:2023-05-03
Method:ELECTRON MICROSCOPY (3.26 Å)
Cite:Structural basis for antibody-mediated neutralization of lymphocytic choriomeningitis virus.
Cell Chem Biol, 30, 2023
5I6Z
DownloadVisualize
BU of 5i6z by Molmil
X-ray structure of the ts2 human serotonin transporter
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 8B6 antibody, heavy chain, ...
Authors:Coleman, J.A, Green, E.M, Gouaux, E.
Deposit date:2016-02-16
Release date:2016-04-13
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (4.53 Å)
Cite:X-ray structures and mechanism of the human serotonin transporter.
Nature, 532, 2016
4X2H
DownloadVisualize
BU of 4x2h by Molmil
Sac3N peptide bound to Mex67:Mtr2
Descriptor: Putative mRNA export protein, Putative uncharacterized protein, SER-SER-VAL-PHE-GLY-ALA-PRO-ALA
Authors:Aibara, S, Valkov, E, Stewart, M.
Deposit date:2014-11-26
Release date:2015-06-17
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural Characterization of the Chaetomium thermophilum TREX-2 Complex and its Interaction with the mRNA Nuclear Export Factor Mex67:Mtr2.
Structure, 23, 2015
5L39
DownloadVisualize
BU of 5l39 by Molmil
The structure of the fused permuted hexameric shell protein MSM0275 from the RMM microcompartment
Descriptor: CHLORIDE ION, RMM microcompartment shell protein MSM0275
Authors:Mallette, E, Kimber, M.S.
Deposit date:2016-08-03
Release date:2016-12-14
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:A Complete Structural Inventory of the Mycobacterial Microcompartment Shell Proteins Constrains Models of Global Architecture and Transport.
J. Biol. Chem., 292, 2017
7R0D
DownloadVisualize
BU of 7r0d by Molmil
Structure of NUDT15 in complex with Geranyl monophosphate
Descriptor: Geranyl phosphate, MAGNESIUM ION, Probable 8-oxo-dGTP diphosphatase NUDT15
Authors:Scaletti, E.R, Stenmark, P.
Deposit date:2022-02-01
Release date:2023-11-29
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structure of NUDT15 in complex with Geranyl monophosphate
To Be Published

223166

PDB entries from 2024-07-31

PDB statisticsPDBj update infoContact PDBjnumon