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PDB: 40926 results

4XKT
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BU of 4xkt by Molmil
E coli BFR variant Y149F
Descriptor: Bacterioferritin, SULFATE ION
Authors:Bradley, J.M, Hemmings, A.M, Le Brun, N.E.
Deposit date:2015-01-12
Release date:2015-12-16
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.82 Å)
Cite:Three Aromatic Residues are Required for Electron Transfer during Iron Mineralization in Bacterioferritin.
Angew.Chem.Int.Ed.Engl., 54, 2015
8P67
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BU of 8p67 by Molmil
Crystal structure of Thermothelomyces thermophila (double mutant EE) in complex with aldotetrauronic acid
Descriptor: 1,2-ETHANEDIOL, 4-O-methyl-alpha-D-glucopyranuronic acid-(1-2)-beta-D-xylopyranose-(1-4)-beta-D-xylopyranose-(1-4)-beta-D-xylopyranose, GH30 family xylanase, ...
Authors:Dimarogona, M, Pentari, C, Kosinas, C, Topakas, E.
Deposit date:2023-05-25
Release date:2024-05-22
Last modified:2024-06-19
Method:X-RAY DIFFRACTION (1.37 Å)
Cite:Structural and molecular insights into a bifunctional glycoside hydrolase 30 xylanase specific to glucuronoxylan.
Biotechnol.Bioeng., 121, 2024
2MHQ
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BU of 2mhq by Molmil
Solution structure of the major factor VIII binding region on von Willebrand factor
Descriptor: von Willebrand factor
Authors:Shiltagh, N, Kirkpatrick, J, Cabrita, L.D, McKinnon, T.A.J, Thalassinos, K, Tuddenham, E.G.D, Hansen, D.F.
Deposit date:2013-12-02
Release date:2014-05-14
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Solution structure of the major factor VIII binding region on von Willebrand factor.
Blood, 123, 2014
4XAV
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BU of 4xav by Molmil
Crystal structure of olfactomedin domain from gliomedin
Descriptor: GLYCEROL, Gliomedin, PHOSPHATE ION, ...
Authors:Hill, S.E, Nguyen, E, Lieberman, R.L.
Deposit date:2014-12-15
Release date:2015-07-15
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.052 Å)
Cite:Molecular Details of Olfactomedin Domains Provide Pathway to Structure-Function Studies.
Plos One, 10, 2015
8T4O
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BU of 8t4o by Molmil
Human mitochondrial serine hydroxymethyltransferase (SHMT2) in complex with PLP, glycine and AGF347 inhibitor with no glutamate
Descriptor: 4-[4-(2-amino-4-oxo-3,4-dihydro-5H-pyrrolo[3,2-d]pyrimidin-5-yl)butyl]-2-fluorobenzoic acid, N-GLYCINE-[3-HYDROXY-2-METHYL-5-PHOSPHONOOXYMETHYL-PYRIDIN-4-YL-METHANE], Serine hydroxymethyltransferase, ...
Authors:Katinas, J.M, Dann III, C.E.
Deposit date:2023-06-09
Release date:2024-02-21
Method:X-RAY DIFFRACTION (2.68 Å)
Cite:Structural Characterization of 5-Substituted Pyrrolo[3,2- d ]pyrimidine Antifolate Inhibitors in Complex with Human Serine Hydroxymethyl Transferase 2.
Biochemistry, 2024
6AVB
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BU of 6avb by Molmil
CryoEM structure of Mical Oxidized Actin (Class 1)
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Actin, alpha skeletal muscle
Authors:Grintsevich, E.E, Ge, P, Sawaya, M.R, Yesilyurt, H.G, Terman, J.R, Zhou, Z.H, Reisler, E.
Deposit date:2017-09-01
Release date:2018-01-17
Last modified:2019-11-06
Method:ELECTRON MICROSCOPY (3.9 Å)
Cite:Catastrophic disassembly of actin filaments via Mical-mediated oxidation.
Nat Commun, 8, 2017
6E7L
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BU of 6e7l by Molmil
Structure of a dimerized UUCG motif
Descriptor: RNA (5'-R(*GP*GP*GP*CP*UP*GP*CP*AP*CP*UP*UP*CP*GP*GP*UP*GP*CP*UP*GP*CP*CP*C)-3')
Authors:Montemayor, E.J, Butcher, S.E.
Deposit date:2018-07-26
Release date:2019-07-31
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.59 Å)
Cite:Structure of an RNA helix with pyrimidine mismatches and cross-strand stacking.
Acta Crystallogr.,Sect.F, 75, 2019
6M3F
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BU of 6m3f by Molmil
Crystal structure of the mouse endonuclease EndoG(H138A/C110A), space group P212121
Descriptor: Endonuclease G, mitochondrial, MAGNESIUM ION
Authors:Park, K.H, Woo, E.J.
Deposit date:2020-03-03
Release date:2020-08-12
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (1.96 Å)
Cite:Crystal structure of the mouse endonuclease G.
Biochem.Biophys.Res.Commun., 526, 2020
2IH4
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BU of 2ih4 by Molmil
Crystal structure of the adenine-specific DNA methyltransferase M.TaqI complexed with the cofactor analog AETA and a 10 bp DNA containing pyrrolo-dC at the target base partner position
Descriptor: 5'-D(*GP*AP*CP*AP*(4PC)P*CP*GP*(6MA)P*AP*C)-3', 5'-D(*GP*TP*TP*CP*GP*AP*TP*GP*TP*C)-3', 5'-DEOXY-5'-[2-(AMINO)ETHYLTHIO]ADENOSINE, ...
Authors:Lenz, T, Scheidig, A.J, Weinhold, E.
Deposit date:2006-09-25
Release date:2007-11-13
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Influence of the target base partner on the methylation rate of the adenine-specific DNA methyltransferase M.TaqI
To be Published
7PGE
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BU of 7pge by Molmil
copper transporter PcoB
Descriptor: (HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE, Copper resistance protein B, LAURYL DIMETHYLAMINE-N-OXIDE, ...
Authors:Li, P, Gourdon, P.E.
Deposit date:2021-08-13
Release date:2022-07-06
Last modified:2024-06-19
Method:X-RAY DIFFRACTION (2 Å)
Cite:PcoB is a defense outer membrane protein that facilitates cellular uptake of copper.
Protein Sci., 31, 2022
8TL6
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BU of 8tl6 by Molmil
Cryo-EM structure of DDB1deltaB-DDA1-DCAF5
Descriptor: DDB1- and CUL4-associated factor 5, DET1- and DDB1-associated protein 1, DNA damage-binding protein 1
Authors:Yue, H, Hunkeler, M, Roy Burman, S.S, Fischer, E.S.
Deposit date:2023-07-26
Release date:2024-04-03
Last modified:2024-04-17
Method:ELECTRON MICROSCOPY (2.63 Å)
Cite:Targeting DCAF5 suppresses SMARCB1-mutant cancer by stabilizing SWI/SNF.
Nature, 628, 2024
4PUO
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BU of 4puo by Molmil
Crystal structure of HIV-1 reverse transcriptase in complex with RNA/DNA and Nevirapine
Descriptor: 11-CYCLOPROPYL-5,11-DIHYDRO-4-METHYL-6H-DIPYRIDO[3,2-B:2',3'-E][1,4]DIAZEPIN-6-ONE, 5'-D(*A*CP*AP*GP*TP*CP*CP*CP*TP*GP*TP*TP*CP*GP*GP*GP*CP*GP*CP*CP*G)-3', 5'-R(P*AP*UP*GP*GP*UP*CP*GP*GP*CP*GP*CP*CP*CP*GP*AP*AP*CP*AP*GP*GP*GP*AP*CP*UP*GP*UP*G)-3', ...
Authors:Das, K, Martinez, S.E, Arnold, E.
Deposit date:2014-03-13
Release date:2014-06-18
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.901 Å)
Cite:Structures of HIV-1 RT-RNA/DNA ternary complexes with dATP and nevirapine reveal conformational flexibility of RNA/DNA: insights into requirements for RNase H cleavage.
Nucleic Acids Res., 42, 2014
1S1X
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BU of 1s1x by Molmil
Crystal structure of V108I mutant HIV-1 reverse transcriptase in complex with nevirapine
Descriptor: 11-CYCLOPROPYL-5,11-DIHYDRO-4-METHYL-6H-DIPYRIDO[3,2-B:2',3'-E][1,4]DIAZEPIN-6-ONE, Reverse transcriptase
Authors:Ren, J, Nichols, C.E, Chamberlain, P.P, Stammers, D.K.
Deposit date:2004-01-07
Release date:2004-06-29
Last modified:2021-11-10
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Crystal structures of HIV-1 reverse transcriptases mutated at codons 100, 106 and 108 and mechanisms of resistance to non-nucleoside inhibitors
J.Mol.Biol., 336, 2004
8TLU
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BU of 8tlu by Molmil
E. coli MraY mutant-T23P
Descriptor: Phospho-N-acetylmuramoyl-pentapeptide-transferase
Authors:Orta, A.K, Li, Y.E, Clemons, W.M.
Deposit date:2023-07-27
Release date:2024-05-01
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:Synthesis of lipid-linked precursors of the bacterial cell wall is governed by a feedback control mechanism in Pseudomonas aeruginosa.
Nat Microbiol, 9, 2024
4XAT
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BU of 4xat by Molmil
Crystal structure of the olfactomedin domain from noelin/pancortin/olfactomedin-1
Descriptor: CALCIUM ION, GLYCEROL, Noelin, ...
Authors:Hill, S.E, Nguyen, E, Lieberman, R.L.
Deposit date:2014-12-15
Release date:2015-07-15
Last modified:2022-03-30
Method:X-RAY DIFFRACTION (2.113 Å)
Cite:Molecular Details of Olfactomedin Domains Provide Pathway to Structure-Function Studies.
Plos One, 10, 2015
1B0P
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BU of 1b0p by Molmil
CRYSTAL STRUCTURE OF PYRUVATE-FERREDOXIN OXIDOREDUCTASE FROM DESULFOVIBRIO AFRICANUS
Descriptor: CALCIUM ION, IRON/SULFUR CLUSTER, MAGNESIUM ION, ...
Authors:Chabriere, E, Charon, M.H, Volbeda, A.
Deposit date:1998-11-12
Release date:1999-04-23
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.31 Å)
Cite:Crystal structures of the key anaerobic enzyme pyruvate:ferredoxin oxidoreductase, free and in complex with pyruvate.
Nat.Struct.Biol., 6, 1999
8SXZ
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BU of 8sxz by Molmil
Cryo-EM of the GDP-bound human dynamin polymer assembled on the membrane in the super constricted state
Descriptor: Dynamin-1, GUANOSINE-5'-DIPHOSPHATE, MAGNESIUM ION
Authors:Jimah, J.R, Canagarajah, B.J, Hinshaw, J.E.
Deposit date:2023-05-24
Release date:2024-05-01
Last modified:2024-08-07
Method:ELECTRON MICROSCOPY (3.26 Å)
Cite:Cryo-EM structures of membrane-bound dynamin in a post-hydrolysis state primed for membrane fission.
Dev.Cell, 59, 2024
8IPZ
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BU of 8ipz by Molmil
Crystal structure of insulin detemir
Descriptor: CHLORIDE ION, Insulin A chain, Insulin B chain, ...
Authors:DeMirci, H, Ayan, E.
Deposit date:2023-03-15
Release date:2023-12-13
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Crystal structure of insulin detemir
To Be Published
8T0R
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BU of 8t0r by Molmil
Cryo-EM of the GDP-bound human dynamin (full-length) polymer assembled on the membrane in the super constricted state (full helix)
Descriptor: Dynamin-1, GUANOSINE-5'-DIPHOSPHATE, MAGNESIUM ION
Authors:Jimah, J.R, Canagarajah, B.J, Hinshaw, J.E.
Deposit date:2023-06-01
Release date:2024-05-01
Last modified:2024-08-07
Method:ELECTRON MICROSCOPY (3.97 Å)
Cite:Cryo-EM structures of membrane-bound dynamin in a post-hydrolysis state primed for membrane fission.
Dev.Cell, 59, 2024
7Z6U
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BU of 7z6u by Molmil
Pim1 in complex with (E)-4-((6-amino-2-oxoindolin-3-ylidene)methyl)benzoic acid and Pimtide
Descriptor: 4-[(~{E})-(6-azanyl-2-oxidanylidene-1~{H}-indol-3-ylidene)methyl]benzoic acid, GLYCEROL, Isoform 1 of Serine/threonine-protein kinase pim-1, ...
Authors:Hochban, P.M.M, Heine, A, Diederich, W.E.
Deposit date:2022-03-14
Release date:2023-02-01
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.28 Å)
Cite:Pose, duplicate, then elaborate: Steps towards increased affinity for inhibitors targeting the specificity surface of the Pim-1 kinase.
Eur.J.Med.Chem., 245, 2023
6MCY
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BU of 6mcy by Molmil
Crystal structure of mouse Bak
Descriptor: 1,2-ETHANEDIOL, Bcl-2 homologous antagonist/killer, FORMIC ACID
Authors:Brouwer, J.M, Czabotar, P.E, Colman, P.M.
Deposit date:2018-09-03
Release date:2019-09-11
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.748 Å)
Cite:A small molecule interacts with VDAC2 to block mouse BAK-driven apoptosis.
Nat.Chem.Biol., 15, 2019
8SZ8
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BU of 8sz8 by Molmil
Cryo-EM of the GDP-bound human dynamin polymer assembled on the membrane in the super constricted state (full helix)
Descriptor: Dynamin-1, GUANOSINE-5'-DIPHOSPHATE, MAGNESIUM ION
Authors:Jimah, J.R, Canagarajah, B.J, Hinshaw, J.E.
Deposit date:2023-05-27
Release date:2024-05-01
Last modified:2024-08-07
Method:ELECTRON MICROSCOPY (3.55 Å)
Cite:Cryo-EM structures of membrane-bound dynamin in a post-hydrolysis state primed for membrane fission.
Dev.Cell, 59, 2024
8T0K
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BU of 8t0k by Molmil
Cryo-EM of the GDP-bound human dynamin (full-length) polymer assembled on the membrane in the super constricted state
Descriptor: Dynamin-1, GUANOSINE-5'-DIPHOSPHATE, MAGNESIUM ION
Authors:Jimah, J.R, Canagarajah, B.J, Hinshaw, J.E.
Deposit date:2023-06-01
Release date:2024-05-01
Last modified:2024-08-07
Method:ELECTRON MICROSCOPY (3.58 Å)
Cite:Cryo-EM structures of membrane-bound dynamin in a post-hydrolysis state primed for membrane fission.
Dev.Cell, 59, 2024
8PRN
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BU of 8prn by Molmil
E1M, K50A, R52A, D97A, E99A MUTANT OF RH. BLASTICA PORIN
Descriptor: (HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE, PORIN
Authors:Maveyraud, L, Schmid, B, Schulz, G.E.
Deposit date:1998-06-12
Release date:1998-08-12
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Porin mutants with new channel properties.
Protein Sci., 7, 1998
7PV2
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BU of 7pv2 by Molmil
GA1 bacteriophage portal protein
Descriptor: Head-tail connector (Portal protein)
Authors:Javed, A, Villanueva, H, Orlova, E.V, Savva, R.
Deposit date:2021-10-01
Release date:2022-10-12
Last modified:2023-10-25
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Cryo-EM Structures of Two Bacteriophage Portal Proteins Provide Insights for Antimicrobial Phage Engineering.
Viruses, 13, 2021

224572

數據於2024-09-04公開中

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