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PDB: 40736 件

3T8I
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Structural analysis of thermostable S. solfataricus purine-specific nucleoside hydrolase
分子名称: 1,2-ETHANEDIOL, CALCIUM ION, DI(HYDROXYETHYL)ETHER, ...
著者Minici, C, Cacciapuoti, G, De Leo, E, Porcelli, M, Degano, M.
登録日2011-08-01
公開日2012-05-16
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献New Determinants in the Catalytic Mechanism of Nucleoside Hydrolases from the Structures of Two Isozymes from Sulfolobus solfataricus.
Biochemistry, 51, 2012
3T96
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Iodowillardiine bound to a double cysteine mutant (A452C/S652C) of the ligand binding domain of GluA2
分子名称: 2-AMINO-3-(5-IODO-2,4-DIOXO-3,4-DIHYDRO-2H-PYRIMIDIN-1-YL)-PROPIONIC ACID, Glutamate receptor 2, ZINC ION
著者Ahmed, A.H, Wang, S, Chuang, H.H, Oswald, R.E.
登録日2011-08-02
公開日2011-08-17
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.872 Å)
主引用文献Mechanism of AMPA Receptor Activation by Partial Agonists: DISULFIDE TRAPPING OF CLOSED LOBE CONFORMATIONS.
J.Biol.Chem., 286, 2011
3TA6
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Structure of Mycobacterium tuberculosis triosephosphate isomerase
分子名称: CITRATE ANION, Triosephosphate isomerase
著者Connor, S.E, Capodagli, G.C, Deaton, M.K, Pegan, S.D.
登録日2011-08-03
公開日2011-11-30
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.41 Å)
主引用文献Structural and functional characterization of Mycobacterium tuberculosis triosephosphate isomerase.
Acta Crystallogr.,Sect.D, 67, 2011
4UZ5
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STRUCTURE OF THE WNT DEACYLASE NOTUM - CRYSTAL FORM IV - 2.1A
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, CHLORIDE ION, NOTUM
著者Zebisch, M, Jones, E.Y.
登録日2014-09-04
公開日2015-02-25
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Notum Deacylates Wnt Proteins to Suppress Signalling Activity.
Nature, 519, 2015
3T13
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Crystal structure of Staphylococcal nuclease variant Delta+PHS A69G at cryogenic temperature
分子名称: (4R)-2-METHYLPENTANE-2,4-DIOL, CALCIUM ION, PHOSPHATE ION, ...
著者Doctrow, B.M, Schlessman, J.L, Garcia-Moreno E, B, Heroux, A.
登録日2011-07-21
公開日2011-08-03
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Crystal structure of Staphylococcal nuclease variant Delta+PHS A69G at cryogenic temperature
To be Published
3SY5
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Crystal structure of the mutant S127A of orotidine 5'-monophosphate decarboxylase from Methanobacterium thermoautotrophicum complexed with the inhibitor 6azaUMP
分子名称: 6-AZA URIDINE 5'-MONOPHOSPHATE, Orotidine 5'-phosphate decarboxylase
著者Fedorov, A.A, Fedorov, E.V, Desai, B, Iiams, V, Gerlt, J.A, Almo, S.C.
登録日2011-07-15
公開日2011-09-21
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.321 Å)
主引用文献Crystal structure of the mutant S127A of orotidine 5'-monophosphate decarboxylase from Methanobacterium thermoautotrophicum complexed with the inhibitor 6azaUMP
To be Published
3T56
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Crystal structure of the pre-extrusion state of the CusBA adaptor-transporter complex
分子名称: COPPER (II) ION, Cation efflux system protein CusA, Cation efflux system protein CusB
著者Su, C.-C, Long, F, Yu, E.W.
登録日2011-07-26
公開日2012-06-20
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (3.42 Å)
主引用文献Charged Amino Acids (R83, E567, D617, E625, R669, and K678) of CusA Are Required for Metal Ion Transport in the Cus Efflux System.
J.Mol.Biol., 422, 2012
3SYB
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Crystal structure of Pseudomonas aeruginosa OccD3 (OpdP)
分子名称: (HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE, Glycine-glutamate dipeptide porin OpdP, SULFATE ION
著者van den Berg, B, Eren, E.
登録日2011-07-16
公開日2012-02-08
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Substrate Specificity within a Family of Outer Membrane Carboxylate Channels.
Plos Biol., 10, 2012
3T24
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Crystal structure of Pseudomonas aeruginosa OpdQ
分子名称: (HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE, SULFATE ION, porin
著者van den Berg, B, Eren, E.
登録日2011-07-22
公開日2012-02-08
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Substrate Specificity within a Family of Outer Membrane Carboxylate Channels.
Plos Biol., 10, 2012
4UZ3
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Crystal structure of the N-terminal LysM domains from the putative NlpC/P60 D,L endopeptidase from T. thermophilus bound to N-acetyl-chitohexaose
分子名称: 1,4-DIETHYLENE DIOXIDE, 2-acetamido-2-deoxy-alpha-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-alpha-D-glucopyranose, ...
著者Wong, J.E.M.M, Blaise, M.
登録日2014-09-04
公開日2015-01-14
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献An Intermolecular Binding Mechanism Involving Multiple Lysm Domains Mediates Carbohydrate Recognition by an Endopeptidase.
Acta Crystallogr.,Sect.D, 71, 2015
3T9H
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Kainate bound to a double cysteine mutant (A452C/S652C) of the ligand binding domain of GluA2
分子名称: 3-(CARBOXYMETHYL)-4-ISOPROPENYLPROLINE, Glutamate receptor 2, ZINC ION
著者Ahmed, A.H, Wang, S, Chuang, H.H, Oswald, R.E.
登録日2011-08-02
公開日2011-08-17
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.015 Å)
主引用文献Mechanism of AMPA Receptor Activation by Partial Agonists: DISULFIDE TRAPPING OF CLOSED LOBE CONFORMATIONS.
J.Biol.Chem., 286, 2011
4WCH
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Structure of Isolated D Chain of Gigant Hemoglobin from Glossoscolex paulistus
分子名称: Isolated Chain D of Gigant Hemoglobin from Glossoscolex Paulistus, OXYGEN MOLECULE, PROTOPORPHYRIN IX CONTAINING FE
著者Bachega, J.F.R, Maluf, F.V, Pereira, H.M, Brandao-Neto, J, Tabak, M, Garratt, R.C, Horjales, E.
登録日2014-09-04
公開日2015-06-10
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献The structure of the giant haemoglobin from Glossoscolex paulistus.
Acta Crystallogr.,Sect.D, 71, 2015
3TE5
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structure of the regulatory fragment of sacchromyces cerevisiae ampk in complex with NADH
分子名称: 1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE, Carbon catabolite-derepressing protein kinase, Nuclear protein SNF4, ...
著者Mayer, F.V, Heath, R, Underwood, E, Sanders, M.J, Carmena, D, McCartney, R, Leiper, F.C, Xiao, B, Jing, C, Walker, P.A, Haire, L.F, Ogrodowicz, R, Martin, S.R, Schmidt, M.C, Gamblin, S.J, Carling, D.
登録日2011-08-12
公開日2011-11-09
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献ADP Regulates SNF1, the Saccharomyces cerevisiae Homolog of AMP-Activated Protein Kinase.
Cell Metab, 14, 2011
3TFP
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Crystal Structure of Dehydrosqualene Synthase (CrtM) from S. aureus Complexed with BPH-1162
分子名称: 2-({2-chloro-6-[(2,4-dichlorophenyl)sulfanyl]benzyl}carbamoyl)benzoic acid, Dehydrosqualene synthase, MAGNESIUM ION
著者Lin, F.-Y, Liu, Y.-L, Zhang, Y, Oldfield, E.
登録日2011-08-16
公開日2012-04-04
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Dual dehydrosqualene/squalene synthase inhibitors: leads for innate immune system-based therapeutics.
Chemmedchem, 7, 2012
3SOV
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The structure of a beta propeller domain in complex with peptide S
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, GLYCEROL, Low-density lipoprotein receptor-related protein 6, ...
著者Wang, W, Bourhis, E, Zhang, Y, Rouge, L, Wu, Y, Franke, Y, Cochran, A.G.
登録日2011-06-30
公開日2011-09-21
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (1.27 Å)
主引用文献Wnt antagonists bind through a short peptide to the first beta-propeller domain of LRP5/6.
Structure, 19, 2011
3SRB
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Structure of Pseudomonas aeruginosa PvdQ bound to SMER28
分子名称: 1,2-ETHANEDIOL, 6-bromo-N-(prop-2-en-1-yl)quinazolin-4-amine, Acyl-homoserine lactone acylase pvdQ, ...
著者Gulick, A.M, Drake, E.J.
登録日2011-07-07
公開日2011-09-21
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structural Characterization and High-Throughput Screening of Inhibitors of PvdQ, an NTN Hydrolase Involved in Pyoverdine Synthesis.
Acs Chem.Biol., 6, 2011
3SX4
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Crystal structure of human dpp-iv in complex with sa-(+)-3-(aminomethyl)-4-(2,4-dichlorophenyl)-6-(2-methoxyphenyl)- 2-methyl-5h-pyrrolo[3,4-b]pyridin-7(6h)-one
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 3-(aminomethyl)-4-(2,4-dichlorophenyl)-6-(2-methoxyphenyl)-2-methyl-5,6-dihydro-7H-pyrrolo[3,4-b]pyridin-7-one, ...
著者Klei, H.E.
登録日2011-07-14
公開日2011-10-26
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献7-Oxopyrrolopyridine-derived DPP4 inhibitors-mitigation of CYP and hERG liabilities via introduction of polar functionalities in the active site.
Bioorg.Med.Chem.Lett., 21, 2011
3TFR
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Ternary complex structure of DNA polymerase beta with a gapped DNA substrate and a, b dAMP(CF2)PP in the active site
分子名称: 2'-deoxy-5'-O-[(S)-{difluoro[(S)-hydroxy(phosphonooxy)phosphoryl]methyl}(hydroxy)phosphoryl]adenosine, CHLORIDE ION, DNA (5'-D(*CP*CP*GP*AP*CP*TP*GP*CP*GP*CP*AP*TP*CP*AP*GP*C)-3'), ...
著者Chamberlain, B.T, Batra, V.K, Beard, W.A, Kadina, A.P, Shock, D.D, Kashemirov, B.A, McKenna, C.E, Goodman, M.F, Wilson, S.H.
登録日2011-08-16
公開日2012-03-21
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Stereospecific Formation of a Ternary Complex of (S)-alpha, beta-Fluoromethylene-dATP with DNA Pol beta.
Chembiochem, 13, 2012
3T93
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Glutamate bound to a double cysteine mutant (A452C/S652C) of the ligand binding domain of GluA2
分子名称: GLUTAMIC ACID, Glutamate receptor 2, ZINC ION
著者Ahmed, A.H, Oswald, R.E.
登録日2011-08-02
公開日2011-08-17
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.907 Å)
主引用文献Mechanism of AMPA Receptor Activation by Partial Agonists: DISULFIDE TRAPPING OF CLOSED LOBE CONFORMATIONS.
J.Biol.Chem., 286, 2011
3T6F
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Biotin complex of Y54F core streptavidin
分子名称: BIOTIN, BIOTIN-D-SULFOXIDE, GLYCEROL, ...
著者Baugh, L, Le Trong, I, Cerutti, D.S, Mehta, N, Gulich, S, Stayton, P.S, Stenkamp, R.E, Lybrand, T.P.
登録日2011-07-28
公開日2011-12-21
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.22 Å)
主引用文献Second-Contact Shell Mutation Diminishes Streptavidin-Biotin Binding Affinity through Transmitted Effects on Equilibrium Dynamics.
Biochemistry, 51, 2012
3TF3
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Crystal structure of metal-free Human Arginase I
分子名称: Arginase-1
著者D'Antonio, E.L, Christianson, D.W.
登録日2011-08-15
公開日2011-08-31
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.64 Å)
主引用文献Crystal structures of complexes with cobalt-reconstituted human arginase I.
Biochemistry, 50, 2011
3TBG
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Human cytochrome P450 2D6 with two thioridazines bound in active site
分子名称: 10-{2-[(2R)-1-methylpiperidin-2-yl]ethyl}-2-(methylsulfanyl)-10H-phenothiazine, Cytochrome P450 2D6, GLYCEROL, ...
著者Wang, A, Stout, C.D, Johnson, E.F.
登録日2011-08-05
公開日2012-08-08
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Contributions of Ionic Interactions and Protein Dynamics to Cytochrome P450 2D6 (CYP2D6) Substrate and Inhibitor Binding.
J.Biol.Chem., 290, 2015
3THQ
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Crystal structure of Methanothermobacter thermautotrophicus orotidine 5'-monophosphate decarboxylase complexed with 6-amino-UMP
分子名称: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, 6-AMINOURIDINE 5'-MONOPHOSPHATE, Orotidine 5'-phosphate decarboxylase
著者Liu, Y, Kotra, L.P, Pai, E.F.
登録日2011-08-19
公開日2012-05-02
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Crystal structure of Methanothermobacter thermautotrophicus orotidine 5'-monophosphate decarboxylase complexed with 6-amino-UMP
To be Published
3T9U
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CNQX bound to an oxidized double cysteine mutant (A452C/S652C) of the ligand binding domain of GluA2
分子名称: 7-nitro-2,3-dioxo-2,3-dihydroquinoxaline-6-carbonitrile, Glutamate receptor 2, ZINC ION
著者Ahmed, A.H, Oswald, R.E.
登録日2011-08-03
公開日2011-08-17
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.97 Å)
主引用文献Mechanism of AMPA Receptor Activation by Partial Agonists: DISULFIDE TRAPPING OF CLOSED LOBE CONFORMATIONS.
J.Biol.Chem., 286, 2011
3TC3
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Crystal Structure of SacUVDE
分子名称: MANGANESE (II) ION, UV damage endonuclease
著者Meulenbroek, E.M, Jala, I, Moolenaar, G.F, Goosen, N, Pannu, N.S.
登録日2011-08-08
公開日2012-11-07
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献UV damage endonuclease employs a novel dual-dinucleotide flipping mechanism to recognize different DNA lesions.
Nucleic Acids Res., 41, 2013

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