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PDB: 40926 件

6ZQG
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Cryo-EM structure of the 90S pre-ribosome from Saccharomyces cerevisiae, state Dis-C
分子名称: 18S rRNA, 40S ribosomal protein S1-A, 40S ribosomal protein S11-A, ...
著者Cheng, J, Lau, B, Venuta, G.L, Berninghausen, O, Hurt, E, Beckmann, R.
登録日2020-07-09
公開日2020-09-23
最終更新日2024-03-06
実験手法ELECTRON MICROSCOPY (3.5 Å)
主引用文献90 S pre-ribosome transformation into the primordial 40 S subunit.
Science, 369, 2020
1LLS
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BU of 1lls by Molmil
CRYSTAL STRUCTURE OF UNLIGANDED MALTOSE BINDING PROTEIN WITH XENON
分子名称: Maltose-binding periplasmic protein, XENON
著者Rubin, S.M, Lee, S.-Y, Ruiz, E.J, Pines, A, Wemmer, D.E.
登録日2002-04-30
公開日2002-09-18
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献DETECTION AND CHARACTERIZATION OF XENON-BINDING SITES IN PROTEINS BY 129XE NMR SPECTROSCOPY
J.MOL.BIOL., 322, 2002
6ZRY
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6-dimethylallyl tryptophan synthase
分子名称: CALCIUM ION, DI(HYDROXYETHYL)ETHER, DMATS type aromatic prenyltransferase, ...
著者Ostertag, E, Stehle, T, Zocher, G.
登録日2020-07-15
公開日2020-12-09
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.652 Å)
主引用文献Reprogramming Substrate and Catalytic Promiscuity of Tryptophan Prenyltransferases.
J.Mol.Biol., 433, 2020
6ZWC
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Z-SBTub2 photoswitch bound to tubulin-DARPin D1 complex
分子名称: 2-[2-(3,4,5-trimethoxyphenyl)ethyl]-1,3-benzothiazole, Designed Ankyrin Repeat Protein (DARPIN) D1, GUANOSINE-5'-DIPHOSPHATE, ...
著者Wranik, M, Weinert, T, Olieric, N, Gao, L, Kraus, Y.C.M, Bingham, R, Ntouliou, E, Ahlfeld, J, Thorn-Seshold, O, Steinmetz, M.O, Standfuss, J.
登録日2020-07-28
公開日2020-12-23
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.04 Å)
主引用文献A Robust, GFP-Orthogonal Photoswitchable Inhibitor Scaffold Extends Optical Control over the Microtubule Cytoskeleton.
Cell Chem Biol, 28, 2021
6QQ3
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The room temperature structure of lysozyme via the acoustic levitation of a droplet
分子名称: ACETATE ION, CHLORIDE ION, Lysozyme C, ...
著者Axford, D.N, Docker, P, Dye, E, Morris, R.
登録日2019-02-17
公開日2019-03-06
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.53 Å)
主引用文献Non-Contact Universal Sample Presentation for Room Temperature Macromolecular Crystallography Using Acoustic Levitation.
Sci Rep, 9, 2019
6FN2
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X-ray structure of animal-like Cryptochrome from Chlamydomonas reinhardtii
分子名称: 8-HYDROXY-10-(D-RIBO-2,3,4,5-TETRAHYDROXYPENTYL)-5-DEAZAISOALLOXAZINE, CHLORIDE ION, Cryptochrome photoreceptor, ...
著者Franz, S, Ignatz, E, Wenzel, S, Zielosko, H, Yamamoto, J, Mittag, M, Essen, L.-O.
登録日2018-02-02
公開日2018-08-01
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structure of the bifunctional cryptochrome aCRY from Chlamydomonas reinhardtii.
Nucleic Acids Res., 46, 2018
4PPH
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Crystal structure of conglutin gamma, a unique basic 7S globulin from lupine seeds
分子名称: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Czubinski, J, Barciszewski, J, Gilski, M, Lampart-Szczapa, E, Jaskolski, M.
登録日2014-02-27
公開日2015-02-11
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.009 Å)
主引用文献Structure of gamma-conglutin: insight into the quaternary structure of 7S basic globulins from legumes.
Acta Crystallogr.,Sect.D, 71, 2015
5NFW
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Neutron structure of human transthyretin (TTR) S52P mutant at room temperature to 1.8A resolution (quasi-Laue)
分子名称: Transthyretin
著者Yee, A.W, Moulin, M, Blakeley, M.P, Cooper, J.B, Haertlein, M, Mitchell, E.P, Forsyth, V.T.
登録日2017-03-16
公開日2019-01-02
最終更新日2024-05-01
実験手法NEUTRON DIFFRACTION (1.8 Å), X-RAY DIFFRACTION
主引用文献A molecular mechanism for transthyretin amyloidogenesis.
Nat Commun, 10, 2019
8WDV
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Photosynthetic LH1-RC complex from the purple sulfur bacterium Allochromatium vinosum purified by Ca2+-DEAE
分子名称: (1R)-2-{[{[(2S)-2,3-DIHYDROXYPROPYL]OXY}(HYDROXY)PHOSPHORYL]OXY}-1-[(PALMITOYLOXY)METHYL]ETHYL (11E)-OCTADEC-11-ENOATE, (2S)-3-hydroxypropane-1,2-diyl dihexadecanoate, Antenna complex alpha/beta subunit, ...
著者Tani, K, Kanno, R, Harada, A, Kobayashi, A, Minamino, A, Nakamura, N, Ji, X.-C, Purba, E.R, Hall, M, Yu, L.-J, Madigan, M.T, Mizoguchi, A, Iwasaki, K, Humbel, B.M, Kimura, Y, Wang-Otomo, Z.-Y.
登録日2023-09-16
公開日2024-02-21
最終更新日2024-05-08
実験手法ELECTRON MICROSCOPY (2.24 Å)
主引用文献High-resolution structure and biochemical properties of the LH1-RC photocomplex from the model purple sulfur bacterium, Allochromatium vinosum.
Commun Biol, 7, 2024
2JOD
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Pac1-Rshort N-terminal EC domain Pacap(6-38) complex
分子名称: Pituitary adenylate cyclase-activating polypeptide, Pituitary adenylate cyclase-activating polypeptide type I receptor
著者Olejniczak, E.T, Sun, C, Song, D, Davis-Taber, R.A, Barrett, L.W, Scott, V.E, Richardson, P.L, Pereda-lopez, A, Uchic, M.E, Solomon, L.R, Lake, M.R, Walter, K.A, Hajduk, P.J.
登録日2007-03-07
公開日2007-05-22
最終更新日2023-12-20
実験手法SOLUTION NMR
主引用文献Solution structure and mutational analysis of pituitary adenylate cyclase-activating polypeptide binding to the extracellular domain of PAC1-RS.
Proc.Natl.Acad.Sci.Usa, 104, 2007
5NGK
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The endo-beta1,6-glucanase BT3312
分子名称: Glucosylceramidase
著者Basle, A, Temple, M, Cuskin, F, Lowe, E, Gilbert, H.
登録日2017-03-17
公開日2017-05-10
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献A Bacteroidetes locus dedicated to fungal 1,6-beta-glucan degradation: Unique substrate conformation drives specificity of the key endo-1,6-beta-glucanase.
J. Biol. Chem., 292, 2017
6QUP
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Structural signatures in EPR3 define a unique class of plant carbohydrate receptors
分子名称: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, ISOPROPYL ALCOHOL, ...
著者Wong, J.E, Gysel, K, Birkefeldt, T.G, Vinther, M, Muszynski, A, Azadi, P, Laursen, N.S, Sullivan, J.T, Ronson, C.W, Stougaard, J, Andersen, K.R.
登録日2019-02-28
公開日2020-08-05
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.871 Å)
主引用文献Structural signatures in EPR3 define a unique class of plant carbohydrate receptors.
Nat Commun, 11, 2020
6QVG
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Human SHMT2 in complex with lometrexol
分子名称: 5,10-DIDEAZATETRAHYDROFOLIC ACID, ACETATE ION, DI(HYDROXYETHYL)ETHER, ...
著者Scaletti, E, Jemth, A.S, Helleday, T, Stenmark, P.
登録日2019-03-01
公開日2019-09-04
実験手法X-RAY DIFFRACTION (2.32 Å)
主引用文献Structural basis of inhibition of the human serine hydroxymethyltransferase SHMT2 by antifolate drugs.
Febs Lett., 593, 2019
6WL0
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BU of 6wl0 by Molmil
Cryo-EM of Form 1 related peptide filament, 36-31-3-RD
分子名称: peptide 36-31-3-RD
著者Wang, F, Gnewou, O.M, Su, Z, Egelman, E.H, Conticello, V.P.
登録日2020-04-17
公開日2020-12-02
最終更新日2024-03-06
実験手法ELECTRON MICROSCOPY (4.4 Å)
主引用文献Structural analysis of cross alpha-helical nanotubes provides insight into the designability of filamentous peptide nanomaterials.
Nat Commun, 12, 2021
5J5O
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BU of 5j5o by Molmil
Translation initiation factor 4E in complex with m7GppppG mRNA 5' cap analog
分子名称: 5'-O-[(R)-hydroxy{[(R)-hydroxy{[(S)-hydroxy(phosphonooxy)phosphoryl]oxy}phosphoryl]oxy}phosphoryl]-7-methylguanosine, Eukaryotic translation initiation factor 4E, GLYCEROL
著者Warminski, M, Nowak, E, Rydzik, A.M, Kowalska, J, Jemielity, J, Nowotny, M.
登録日2016-04-03
公開日2017-05-10
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.867 Å)
主引用文献mRNA cap analogues substituted in the tetraphosphate chain with CX2: identification of O-to-CCl2 as the first bridging modification that confers resistance to decapping without impairing translation.
Nucleic Acids Res., 45, 2017
5AMN
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BU of 5amn by Molmil
The Discovery of 2-Substituted Phenol Quinazolines as Potent and Selective RET Kinase Inhibitors
分子名称: 4-[3-HYDROXYANILINO]-6,7-DIMETHOXYQUINAZOLINE, FORMIC ACID, PROTO-ONCOGENE TYROSINE-PROTEIN KINASE RECEPTOR RET
著者Newton, R, Bowler, K, Burns, E.M, Chapman, P, Fairweather, E, Fritzl, S, Goldberg, K, Hamilton, N.M, Holt, S.V, Hopkins, G.V, Jones, S.D, Jordan, A.M, Lyons, A, McDonald, N.Q, Maguire, L.A, Mould, D.P, Purkiss, A.G, Small, H.F, Stowell, A, Thomson, G.J, Waddell, I.D, Waszkowycz, B, Watson, A.J, Ogilvie, D.J.
登録日2015-03-11
公開日2016-02-17
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.57 Å)
主引用文献The discovery of 2-substituted phenol quinazolines as potent RET kinase inhibitors with improved KDR selectivity.
Eur J Med Chem, 112, 2016
6WL9
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Cryo-EM of Form 2 like peptide filament, Form2a
分子名称: peptide Form2a
著者Wang, F, Beltran, L.C, Gnewou, O.M, Egelman, E.H, Conticello, V.P.
登録日2020-04-18
公開日2020-12-02
最終更新日2024-03-06
実験手法ELECTRON MICROSCOPY (4.2 Å)
主引用文献Structural analysis of cross alpha-helical nanotubes provides insight into the designability of filamentous peptide nanomaterials.
Nat Commun, 12, 2021
2WOF
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EDTA treated E. coli copper amine oxidase
分子名称: COPPER (II) ION, PRIMARY AMINE OXIDASE, SODIUM ION
著者Smith, M.A, Pirrat, P, Pearson, A.R, Knowles, P.F, Phillips, S.E.V, McPherson, M.J.
登録日2009-07-23
公開日2010-05-05
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献Exploring the Roles of the Metal Ions in Escherichia Coli Copper Amine Oxidase.
Biochemistry, 49, 2010
6BWH
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Crystal structure of Mycoibacterium tuberculosis Rv2983 in complex with PEP
分子名称: 2-phospho-L-lactate guanylyltransferase, MAGNESIUM ION, PHOSPHOENOLPYRUVATE
著者Bashiri, G, Jirgis, E.N.M, Baker, E.N.
登録日2017-12-15
公開日2018-12-19
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.18 Å)
主引用文献A revised biosynthetic pathway for the cofactor F420in prokaryotes.
Nat Commun, 10, 2019
5NIF
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BU of 5nif by Molmil
Yeast 20S proteasome in complex with Blm-pep activator
分子名称: 1,2-ETHANEDIOL, CHLORIDE ION, GLYCEROL, ...
著者Witkowska, J, Grudnik, P, Golik, P, Dubin, G, Jankowska, E.
登録日2017-03-23
公開日2017-08-02
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Crystal structure of a low molecular weight activator Blm-pep with yeast 20S proteasome - insights into the enzyme activation mechanism.
Sci Rep, 7, 2017
6GZ5
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tRNA translocation by the eukaryotic 80S ribosome and the impact of GTP hydrolysis, Translocation-intermediate-POST-3 (TI-POST-3)
分子名称: 18S ribosomal RNA, 28S ribosomal RNA, 5.8S ribosomal RNA, ...
著者Flis, J, Holm, M, Rundlet, E.J, Loerke, J, Hilal, T, Dabrowski, M, Buerger, J, Mielke, T, Blanchard, S.C, Spahn, C.M.T, Budkevich, T.V.
登録日2018-07-03
公開日2018-12-05
最終更新日2022-03-30
実験手法ELECTRON MICROSCOPY (3.5 Å)
主引用文献tRNA Translocation by the Eukaryotic 80S Ribosome and the Impact of GTP Hydrolysis.
Cell Rep, 25, 2018
4ZGO
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Structure of C-terminally truncated Cdc123 from Schizosaccharomyces pombe
分子名称: Cell division cycle protein 123
著者Panvert, M, Dubiez, E, Arnold, L, Perez, J, Seufert, W, Mechulam, Y, Schmitt, E.
登録日2015-04-23
公開日2015-09-30
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (2.063 Å)
主引用文献Cdc123, a Cell Cycle Regulator Needed for eIF2 Assembly, Is an ATP-Grasp Protein with Unique Features.
Structure, 23, 2015
6H5E
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Crystal Structure of the GatD/MurT Enzyme Complex from Staphylococcus aureus with bound AMPPNP
分子名称: DI(HYDROXYETHYL)ETHER, DUF1727 domain-containing protein, GLYCEROL, ...
著者Noeldeke, E.R, Niemann, V, Stoerk, E, Stehle, T.
登録日2018-07-24
公開日2018-09-05
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.139 Å)
主引用文献Structural basis of cell wall peptidoglycan amidation by the GatD/MurT complex of Staphylococcus aureus.
Sci Rep, 8, 2018
6QVL
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Human SHMT2 in complex with pemetrexed
分子名称: CALCIUM ION, DI(HYDROXYETHYL)ETHER, GLYCEROL, ...
著者Scaletti, E, Jemth, A.S, Helleday, T, Stenmark, P.
登録日2019-03-03
公開日2019-09-04
実験手法X-RAY DIFFRACTION (2.28 Å)
主引用文献Structural basis of inhibition of the human serine hydroxymethyltransferase SHMT2 by antifolate drugs.
Febs Lett., 593, 2019
5WGS
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BU of 5wgs by Molmil
Crystal Structure of MalA' H253F, premalbrancheamide complex
分子名称: (5aS,12aS,13aS)-12,12-dimethyl-2,3,11,12,12a,13-hexahydro-1H,5H,6H-5a,13a-(epiminomethano)indolizino[7,6-b]carbazol-14-one, CADMIUM ION, CHLORIDE ION, ...
著者Fraley, A.E, Smith, J.L.
登録日2017-07-14
公開日2017-08-16
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.34 Å)
主引用文献Function and Structure of MalA/MalA', Iterative Halogenases for Late-Stage C-H Functionalization of Indole Alkaloids.
J. Am. Chem. Soc., 139, 2017

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