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PDB: 40736 件

6OPW
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HIV-1 Protease NL4-3 I13V, G16E, V32I, L33F, K45I, M46I, A71V, V82F, I84V Mutant in complex with darunavir
分子名称: (3R,3AS,6AR)-HEXAHYDROFURO[2,3-B]FURAN-3-YL(1S,2R)-3-[[(4-AMINOPHENYL)SULFONYL](ISOBUTYL)AMINO]-1-BENZYL-2-HYDROXYPROPYLCARBAMATE, Protease NL4-3, SULFATE ION
著者Lockbaum, G.J, Henes, M, Kosovrasti, K, Leidner, F, Nachum, G.S, Nalivaika, E.A, Bolon, D.N.A, KurtYilmaz, N, Schiffer, C.A.
登録日2019-04-25
公開日2019-09-04
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Picomolar to Micromolar: Elucidating the Role of Distal Mutations in HIV-1 Protease in Conferring Drug Resistance.
Acs Chem.Biol., 14, 2019
7NB7
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BU of 7nb7 by Molmil
Structure of Mcl-1 complex with compound 6b
分子名称: (2~{R})-2-[[7-but-2-ynyl-5-(3-chloranyl-2-methyl-phenyl)-6-ethyl-pyrrolo[2,3-d]pyrimidin-4-yl]amino]-3-phenyl-propanoic acid, Induced myeloid leukemia cell differentiation protein Mcl-1
著者Dokurno, P, Surgenor, A.E, Kotschy, A.
登録日2021-01-25
公開日2021-10-13
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.82 Å)
主引用文献The Effect of Core Replacement on S64315, a Selective MCL-1 Inhibitor, and Its Analogues.
Acs Omega, 6, 2021
7NB4
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Structure of Mcl-1 complex with compound 1
分子名称: (2~{R})-2-[[5-(3-chloranyl-2-methyl-phenyl)-6-ethyl-thieno[2,3-d]pyrimidin-4-yl]amino]-3-phenyl-propanoic acid, 1-(2-METHOXY-ETHOXY)-2-{2-[2-(2-METHOXY-ETHOXY]-ETHOXY}-ETHANE, Induced myeloid leukemia cell differentiation protein Mcl-1, ...
著者Dokurno, P, Surgenor, A.E, Kotschy, A.
登録日2021-01-25
公開日2021-10-13
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献The Effect of Core Replacement on S64315, a Selective MCL-1 Inhibitor, and Its Analogues.
Acs Omega, 6, 2021
6OSO
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BU of 6oso by Molmil
The crystal structure of the isolate tryptophan synthase alpha-chain from Salmonella enterica serovar typhimurium at 1.75 Angstrom resolution
分子名称: CHLORIDE ION, DIMETHYL SULFOXIDE, SULFATE ION, ...
著者Hilario, E, Dunn, M.F, Mueller, L, Chang, C, Fan, L.
登録日2019-05-01
公開日2020-05-06
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Backbone assignments and conformational dynamics in the S. typhimurium tryptophan synthase alpha-subunit from solution-state NMR.
J.Biomol.Nmr, 74, 2020
6OUY
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The crystal structure of the isolate tryptophan synthase alpha-chain from Salmonella enterica serovar typhimurium at 1.60 Angstrom resolution
分子名称: CHLORIDE ION, DIMETHYL SULFOXIDE, SULFATE ION, ...
著者Hilario, E, Dunn, M.F, Mueller, L, Chang, C, Fan, L.
登録日2019-05-06
公開日2020-05-06
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Backbone assignments and conformational dynamics in the S. typhimurium tryptophan synthase alpha-subunit from solution-state NMR.
J.Biomol.Nmr, 74, 2020
6VE1
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BU of 6ve1 by Molmil
Crystal structure of endo-beta-N-acetylglucosaminidase H at high pH
分子名称: Endo-beta-N-acetylglucosaminidase H, MAGNESIUM ION
著者Stachowski, T.R, Snell, M.E, Snell, E.S.
登録日2019-12-28
公開日2020-11-25
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献SAXS studies of X-ray induced disulfide bond damage: Engineering high-resolution insight from a low-resolution technique.
Plos One, 15, 2020
7Q06
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Crystal structure of TPADO in complex with 2-OH-TPA
分子名称: 2-Hydroxyterephthalic acid, FE (III) ION, FE2/S2 (INORGANIC) CLUSTER, ...
著者Zahn, M, Kincannon, W.M, DuBois, J.L, McGeehan, J.E.
登録日2021-10-14
公開日2022-03-30
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Biochemical and structural characterization of an aromatic ring-hydroxylating dioxygenase for terephthalic acid catabolism.
Proc.Natl.Acad.Sci.USA, 119, 2022
7Q05
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Crystal structure of TPADO in complex with TPA
分子名称: FE (III) ION, FE2/S2 (INORGANIC) CLUSTER, Lysozyme, ...
著者Zahn, M, Kincannon, W.M, DuBois, J.L, McGeehan, J.E.
登録日2021-10-14
公開日2022-03-30
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.08 Å)
主引用文献Biochemical and structural characterization of an aromatic ring-hydroxylating dioxygenase for terephthalic acid catabolism.
Proc.Natl.Acad.Sci.USA, 119, 2022
7Q04
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BU of 7q04 by Molmil
Crystal structure of TPADO in a substrate-free state
分子名称: FE (III) ION, FE2/S2 (INORGANIC) CLUSTER, Lysozyme, ...
著者Zahn, M, Kincannon, W.M, DuBois, J.L, McGeehan, J.E.
登録日2021-10-14
公開日2022-04-06
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.281 Å)
主引用文献Biochemical and structural characterization of an aromatic ring-hydroxylating dioxygenase for terephthalic acid catabolism.
Proc.Natl.Acad.Sci.USA, 119, 2022
4XR7
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BU of 4xr7 by Molmil
Structure of the Saccharomyces cerevisiae PAN2-PAN3 core complex
分子名称: PAB-dependent poly(A)-specific ribonuclease subunit PAN2, PAB-dependent poly(A)-specific ribonuclease subunit PAN3
著者Schafer, I.B, Rode, M, Bonneau, F, Schussler, S, Conti, E.
登録日2015-01-20
公開日2015-01-28
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (3.796 Å)
主引用文献The structure of the Pan2-Pan3 core complex reveals cross-talk between deadenylase and pseudokinase.
Nat. Struct. Mol. Biol., 21, 2014
4XJK
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BU of 4xjk by Molmil
Crystal structure of Mn(II) Ca(II) Na(I) bound calprotectin
分子名称: CALCIUM ION, MANGANESE (II) ION, Protein S100-A8, ...
著者Drennan, C.L, Bowman, S.E.J.
登録日2015-01-08
公開日2015-04-15
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.76 Å)
主引用文献Manganese Binding Properties of Human Calprotectin under Conditions of High and Low Calcium: X-ray Crystallographic and Advanced Electron Paramagnetic Resonance Spectroscopic Analysis.
J.Am.Chem.Soc., 137, 2015
6MP0
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BU of 6mp0 by Molmil
Crystal structures of the murine class I major histocompatibility complex H-2Db in complex with the TRP1-M9 peptide
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, TRP1-M9 peptide, Beta-2-microglobulin,H-2 class I histocompatibility antigen, ...
著者Clancy-Thompson, E, Devlin, C.A, Birnbaum, M.E, Dougan, S.K.
登録日2018-10-05
公開日2018-11-07
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Altered Binding of Tumor Antigenic Peptides to MHC Class I Affects CD8+T Cell-Effector Responses.
Cancer Immunol Res, 6, 2018
1WV1
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BU of 1wv1 by Molmil
Crystallographic studies on acyl ureas, a new class of inhibitors of glycogenphosphorylase. Broad specificity of the allosteric site
分子名称: 5-[3-({[(2,4-DICHLOROBENZOYL)AMINO]CARBONYL}AMINO)-2-METHYLPHENOXY]PENTANOIC ACID, Glycogen phosphorylase, muscle form, ...
著者Oikonomakos, N.G, Kosmopoulou, M.N, Chrysina, E.D, Leonidas, D.D, Klabunde, T, Wendt, K.U, Defossa, E.
登録日2004-12-10
公開日2005-12-10
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.26 Å)
主引用文献Crystallographic studies on acyl ureas, a new class of glycogen phosphorylase inhibitors, as potential antidiabetic drugs
Protein Sci., 14, 2005
7ASU
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BU of 7asu by Molmil
Crystal structure of tWHD1 of Rpc5 subunit of human RNA Polymerase III
分子名称: DNA-directed RNA polymerase III subunit RPC5, ZINC ION
著者Vannini, A, Abascal-Palacios, G, Ramsay, E.P.
登録日2020-10-28
公開日2020-12-30
実験手法X-RAY DIFFRACTION (2.23 Å)
主引用文献Structure of human RNA polymerase III.
Nat Commun, 11, 2020
6OXA
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BU of 6oxa by Molmil
Dimeric E.coli YoeB bound to Thermus thermophilus 70S pre-cleavage (AAU)
分子名称: 16S rRNA, 23S rRNA, 30S ribosomal protein S10, ...
著者Pavelich, I.J, Hoffer, E.D, Maehigashi, T, Dunham, C.M.
登録日2019-05-13
公開日2019-08-21
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (3.25 Å)
主引用文献Monomeric YoeB toxin retains RNase activity but adopts an obligate dimeric form for thermal stability.
Nucleic Acids Res., 47, 2019
5JIU
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BU of 5jiu by Molmil
The crystal structure of RanBPM/9 IUS-SPRY domain in complex with DDX-4 peptide
分子名称: CHLORIDE ION, Probable ATP-dependent RNA helicase DDX4, Ran-binding protein 9
著者Hong, S.K, Kim, K.-H, Kim, E.E.
登録日2016-04-22
公開日2016-11-09
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.054 Å)
主引用文献Structural Basis for the Interaction between the IUS-SPRY Domain of RanBPM and DDX-4 in Germ Cell Development.
J.Mol.Biol., 428, 2016
6XL4
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BU of 6xl4 by Molmil
EGFR(T790M/V948R) in complex with AZD9291 and DDC4002
分子名称: 10-benzyl-8-fluoro-5,10-dihydro-11H-dibenzo[b,e][1,4]diazepin-11-one, Epidermal growth factor receptor, MAGNESIUM ION, ...
著者Heppner, D.E, Beyett, T.S, Eck, M.J.
登録日2020-06-28
公開日2021-06-30
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.06 Å)
主引用文献Molecular basis for cooperative binding and synergy of ATP-site and allosteric EGFR inhibitors.
Nat Commun, 13, 2022
7NFR
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BU of 7nfr by Molmil
Fujian capmidlink domain in complex with Nb8194
分子名称: GLYCEROL, NB8194, Polymerase basic protein 2, ...
著者Keown, J.R, Grimes, J.M, Fodor, E.
登録日2021-02-07
公開日2021-12-01
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.88 Å)
主引用文献Mapping inhibitory sites on the RNA polymerase of the 1918 pandemic influenza virus using nanobodies.
Nat Commun, 13, 2022
7NFQ
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BU of 7nfq by Molmil
Fujian capmidlink domain in complex with Nb8193
分子名称: DI(HYDROXYETHYL)ETHER, GLYCEROL, Nb8193, ...
著者Keown, J.R, Grimes, J.M, Fodor, E.
登録日2021-02-07
公開日2021-12-01
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.68 Å)
主引用文献Mapping inhibitory sites on the RNA polymerase of the 1918 pandemic influenza virus using nanobodies.
Nat Commun, 13, 2022
7NFT
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BU of 7nft by Molmil
Fujian capbinding domain in complex with Nb8208
分子名称: Nb8208, Polymerase basic protein 2, SULFATE ION
著者Keown, J.R, Grimes, J.M, Fodor, E.
登録日2021-02-07
公開日2021-12-01
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (3.14 Å)
主引用文献Mapping inhibitory sites on the RNA polymerase of the 1918 pandemic influenza virus using nanobodies.
Nat Commun, 13, 2022
7W9W
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2.02 angstrom cryo-EM structure of the pump-like channelrhodopsin ChRmine
分子名称: CHOLESTEROL, ChRmine, PALMITIC ACID, ...
著者Kishi, K.E, Kim, Y, Fukuda, M, Yamashita, K, Deisseroth, K, Kato, H.E.
登録日2021-12-11
公開日2022-02-02
最終更新日2022-03-09
実験手法ELECTRON MICROSCOPY (2 Å)
主引用文献Structural basis for channel conduction in the pump-like channelrhodopsin ChRmine.
Cell, 185, 2022
6P2T
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BshB from Bacillus subtilis complexed with citrate
分子名称: CITRIC ACID, N-acetyl-alpha-D-glucosaminyl L-malate deacetylase 1, SODIUM ION, ...
著者Cook, P.D, Meloche, C.E.
登録日2019-05-22
公開日2020-01-08
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.853 Å)
主引用文献X-ray crystallographic structure of BshB, the zinc-dependent deacetylase involved in bacillithiol biosynthesis.
Protein Sci., 29, 2020
5MKB
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Maltodextrin binding protein MalE1 from L. casei BL23 without ligand
分子名称: MalE1
著者Homburg, C, Bommer, M, Wuttge, S, Hobe, C, Beck, S, Dobbek, H, Deutscher, J, Licht, A, Schneider, E.
登録日2016-12-03
公開日2017-07-05
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.698 Å)
主引用文献Inducer exclusion in Firmicutes: insights into the regulation of a carbohydrate ATP binding cassette transporter from Lactobacillus casei BL23 by the signal transducing protein P-Ser46-HPr.
Mol. Microbiol., 105, 2017
7NHE
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Crystal structure of Arabidopsis thaliana Pdx1K166R-I333 complex
分子名称: PHOSPHATE ION, Pyridoxal 5'-phosphate synthase subunit PDX1.3, [(~{E},4~{S})-4-azanyl-3-oxidanylidene-pent-1-enyl] dihydrogen phosphate
著者Rodrigues, M.J, Zhang, Y, Bolton, R, Evans, G, Giri, N, Royant, A, Begley, T, Ealick, S.E, Tews, I.
登録日2021-02-10
公開日2021-12-22
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.23 Å)
主引用文献Trapping and structural characterisation of a covalent intermediate in vitamin B 6 biosynthesis catalysed by the Pdx1 PLP synthase.
Rsc Chem Biol, 3, 2022
7N41
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Crystal structure of TagA with UDP-ManNAc
分子名称: (2R,3S,4R,5S,6R)-3-acetamido-4,5-dihydroxy-6-(hydroxymethyl)oxan-2-yl [(2R,3S,4R,5R)-5-(2,4-dioxo-3,4-dihydropyrimidin-1(2H)-yl)-3,4-dihydroxyoxolan-2-yl]methyl dihydrogen diphosphate (non-preferred name), N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase
著者Martinez, O.E, Cascio, D, Clubb, R.T.
登録日2021-06-03
公開日2021-12-29
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (3.3 Å)
主引用文献Insight into the molecular basis of substrate recognition by the wall teichoic acid glycosyltransferase TagA.
J.Biol.Chem., 298, 2021

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