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PDB: 220 results

6OUV
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BU of 6ouv by Molmil
1-deoxy-D-xylulose 5-phosphate synthase (DXPS) from Deinococcus radiodurans with methylacetylphosphonate (MAP) bound
Descriptor: 1-deoxy-D-xylulose-5-phosphate synthase, 3-[(4-AMINO-2-METHYLPYRIMIDIN-5-YL)METHYL]-2-{(1S)-1-HYDROXY-1-[(R)-HYDROXY(METHOXY)PHOSPHORYL]ETHYL}-5-(2-{[(S)-HYDROXY(PHOSPHONOOXY)PHOSPHORYL]OXY}ETHYL)-4-METHYL-1,3-THIAZOL-3-IUM, MAGNESIUM ION, ...
Authors:Chen, P.Y.-T, Drennan, C.L.
Deposit date:2019-05-05
Release date:2019-07-03
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.937 Å)
Cite:X-ray crystallography-based structural elucidation of enzyme-bound intermediates along the 1-deoxy-d-xylulose 5-phosphate synthase reaction coordinate.
J.Biol.Chem., 294, 2019
6OUW
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BU of 6ouw by Molmil
1-deoxy-D-xylulose 5-phosphate synthase (DXPS) from Deinococcus radiodurans with enamine intermediate bound
Descriptor: 1-deoxy-D-xylulose-5-phosphate synthase, 2-ACETYL-THIAMINE DIPHOSPHATE, MAGNESIUM ION, ...
Authors:Chen, P.Y.-T, Drennan, C.L.
Deposit date:2019-05-05
Release date:2019-07-03
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.398 Å)
Cite:X-ray crystallography-based structural elucidation of enzyme-bound intermediates along the 1-deoxy-d-xylulose 5-phosphate synthase reaction coordinate.
J.Biol.Chem., 294, 2019
6UO0
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BU of 6uo0 by Molmil
Crystal structure of cytosolic fumarate hydratase from Leishmania major in a complex with S-malate
Descriptor: (2S)-2-hydroxybutanedioic acid, Fumarate hydratase 2, GLYCEROL, ...
Authors:Feliciano, P.R, Drennan, C.L.
Deposit date:2019-10-14
Release date:2019-12-04
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Structural and Biochemical Investigations of the [4Fe-4S] Cluster-Containing Fumarate Hydratase fromLeishmania major.
Biochemistry, 58, 2019
6UNZ
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BU of 6unz by Molmil
Crystal structure of cytosolic fumarate hydratase from Leishmania major
Descriptor: GLYCEROL, IRON/SULFUR CLUSTER, fumarate hydratase 2
Authors:Feliciano, P.R, Drennan, C.L.
Deposit date:2019-10-14
Release date:2019-12-04
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (3.195 Å)
Cite:Structural and Biochemical Investigations of the [4Fe-4S] Cluster-Containing Fumarate Hydratase fromLeishmania major.
Biochemistry, 58, 2019
2HZV
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BU of 2hzv by Molmil
NikR-operator DNA complex
Descriptor: 5'-D(*AP*GP*TP*AP*TP*GP*AP*CP*GP*AP*AP*TP*AP*CP*TP*TP*AP*AP*AP*AP*TP*CP*GP*TP*CP*AP*TP*AP*CP*T)-3', 5'-D(*AP*GP*TP*AP*TP*GP*AP*CP*GP*AP*TP*TP*TP*TP*AP*AP*GP*TP*AP*TP*TP*CP*GP*TP*CP*AP*TP*AP*CP*T)-3', NICKEL (II) ION, ...
Authors:Schreiter, E.R, Drennan, C.L.
Deposit date:2006-08-09
Release date:2006-08-22
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:NikR-operator complex structure and the mechanism of repressor activation by metal ions.
Proc.Natl.Acad.Sci.Usa, 103, 2006
2HZA
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BU of 2hza by Molmil
Nickel-bound full-length Escherichia coli NikR
Descriptor: 3-CYCLOHEXYLPROPYL 4-O-ALPHA-D-GLUCOPYRANOSYL-BETA-D-GLUCOPYRANOSIDE, NICKEL (II) ION, Nickel-responsive regulator
Authors:Schreiter, E.R, Drennan, C.L.
Deposit date:2006-08-08
Release date:2006-08-22
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:NikR-operator complex structure and the mechanism of repressor activation by metal ions.
Proc.Natl.Acad.Sci.Usa, 103, 2006
2E7F
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5-methyltetrahydrofolate corrinoid/iron sulfur protein methyltransferase complexed with methyltetrahydrofolate to 2.2 Angsrom resolution
Descriptor: 5-METHYL-5,6,7,8-TETRAHYDROFOLIC ACID, 5-methyltetrahydrofolate corrinoid/iron sulfur protein methyltransferase, CALCIUM ION
Authors:Doukov, T.I, Drennan, C.L, Hemmi, H, Ragsdale, S.W.
Deposit date:2007-01-09
Release date:2007-01-30
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structural and kinetic evidence for an extended hydrogen-bonding network in catalysis of methyl group transfer. Role of an active site asparagine residue in activation of methyl transfer by methyltransferases.
J.Biol.Chem., 282, 2007
2FCV
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SyrB2 with Fe(II), bromide, and alpha-ketoglutarate
Descriptor: ((2R,3S,4S,5S)-3,4-DIHYDROXY-5-(HYDROXYMETHYL)-5-((2R,3S,4S,5S,6R)-3,4,5-TRIHYDROXY-6-METHOXY-TETRAHYDRO-2H-PYRAN-2-YLOXY)-TETRAHYDROFURAN-2-YL)METHYL NONANOATE, 2-OXOGLUTARIC ACID, BROMIDE ION, ...
Authors:Blasiak, L.C, Drennan, C.L.
Deposit date:2005-12-12
Release date:2006-03-21
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structure of the non-haem iron halogenase SyrB2 in syringomycin biosynthesis.
Nature, 440, 2006
2FCT
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BU of 2fct by Molmil
SyrB2 with Fe(II), chloride, and alpha-ketoglutarate
Descriptor: ((2R,3S,4S,5S)-3,4-DIHYDROXY-5-(HYDROXYMETHYL)-5-((2R,3S,4S,5S,6R)-3,4,5-TRIHYDROXY-6-METHOXY-TETRAHYDRO-2H-PYRAN-2-YLOXY)-TETRAHYDROFURAN-2-YL)METHYL NONANOATE, 2-OXOGLUTARIC ACID, CHLORIDE ION, ...
Authors:Blasiak, L.C, Drennan, C.L.
Deposit date:2005-12-12
Release date:2006-03-21
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Crystal structure of the non-haem iron halogenase SyrB2 in syringomycin biosynthesis.
Nature, 440, 2006
2FCU
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BU of 2fcu by Molmil
SyrB2 with alpha-ketoglutarate
Descriptor: ((2R,3S,4S,5S)-3,4-DIHYDROXY-5-(HYDROXYMETHYL)-5-((2R,3S,4S,5S,6R)-3,4,5-TRIHYDROXY-6-METHOXY-TETRAHYDRO-2H-PYRAN-2-YLOXY)-TETRAHYDROFURAN-2-YL)METHYL NONANOATE, 2-OXOGLUTARIC ACID, syringomycin biosynthesis enzyme 2
Authors:Blasiak, L.C, Drennan, C.L.
Deposit date:2005-12-12
Release date:2006-03-21
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Crystal structure of the non-haem iron halogenase SyrB2 in syringomycin biosynthesis.
Nature, 440, 2006
2E4G
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BU of 2e4g by Molmil
RebH with bound L-Trp
Descriptor: TRYPTOPHAN, Tryptophan halogenase
Authors:Blasiak, L.C, Drennan, C.L.
Deposit date:2006-12-07
Release date:2007-02-13
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.08 Å)
Cite:Chlorination by a long-lived intermediate in the mechanism of flavin-dependent halogenases
Biochemistry, 46, 2007
3EPT
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BU of 3ept by Molmil
Structure of the rebeccamycin biosynthetic enzyme RebC with reduced flavin
Descriptor: DIHYDROFLAVINE-ADENINE DINUCLEOTIDE, RebC, SODIUM ION
Authors:Ryan, K.S, Drennan, C.L.
Deposit date:2008-09-30
Release date:2008-12-09
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.97 Å)
Cite:The FAD cofactor of RebC shifts to an IN conformation upon flavin reduction
Biochemistry, 47, 2008
4XC8
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BU of 4xc8 by Molmil
Isobutyryl-CoA mutase fused with bound butyryl-CoA, GDP, and Mg and without cobalamin (apo-IcmF/GDP)
Descriptor: Butyryl Coenzyme A, GUANOSINE-5'-DIPHOSPHATE, Isobutyryl-CoA mutase fused, ...
Authors:Jost, M, Drennan, C.L.
Deposit date:2014-12-17
Release date:2015-02-11
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (3.25 Å)
Cite:Visualization of a radical B12 enzyme with its G-protein chaperone.
Proc.Natl.Acad.Sci.USA, 112, 2015
4XHM
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BU of 4xhm by Molmil
Archaeoglobus fulgidus thioredoxin 3 M60H
Descriptor: Thioredoxin (Trx-3)
Authors:Dey, M, Bjork, R.E, Drennan, C.L.
Deposit date:2015-01-05
Release date:2015-04-29
Last modified:2019-11-20
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Rheostat Re-Wired: Alternative Hypotheses for the Control of Thioredoxin Reduction Potentials.
Plos One, 10
8STA
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BU of 8sta by Molmil
Isobutyryl-CoA mutase fused in the presence of GMPPCP
Descriptor: Isobutyryl-CoA mutase fused
Authors:Vaccaro, F.A, Drennan, C.L.
Deposit date:2023-05-09
Release date:2023-08-09
Last modified:2023-09-13
Method:ELECTRON MICROSCOPY (7.3 Å)
Cite:Structural insight into G-protein chaperone-mediated maturation of a bacterial adenosylcobalamin-dependent mutase.
J.Biol.Chem., 299, 2023
3GJA
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BU of 3gja by Molmil
CytC3
Descriptor: ACETATE ION, CytC3
Authors:Wong, C, Drennan, C.L.
Deposit date:2009-03-08
Release date:2009-04-14
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structural analysis of an open active site conformation of nonheme iron halogenase CytC3
J.Am.Chem.Soc., 131, 2009
3GJB
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BU of 3gjb by Molmil
CytC3 with Fe(II) and alpha-ketoglutarate
Descriptor: 2-OXOGLUTARIC ACID, ACETATE ION, CytC3, ...
Authors:Wong, C, Drennan, C.L.
Deposit date:2009-03-08
Release date:2009-04-14
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structural analysis of an open active site conformation of nonheme iron halogenase CytC3
J.Am.Chem.Soc., 131, 2009
8SSL
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BU of 8ssl by Molmil
Isobutyryl-CoA mutase fused Q341A in the presence of GTP
Descriptor: Fused isobutyryl-CoA mutase, GUANOSINE-5'-DIPHOSPHATE, MAGNESIUM ION
Authors:Vaccaro, F.A, Drennan, C.L.
Deposit date:2023-05-08
Release date:2024-05-08
Method:ELECTRON MICROSCOPY (4.6 Å)
Cite:Structural insight into G-protein chaperone-mediated maturation of a bacterial adenosylcobalamin-dependent mutase.
J.Biol.Chem., 299, 2023
3OD2
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BU of 3od2 by Molmil
E. coli NikR soaked with excess nickel ions
Descriptor: 3-CYCLOHEXYLPROPYL 4-O-ALPHA-D-GLUCOPYRANOSYL-BETA-D-GLUCOPYRANOSIDE, NICKEL (II) ION, Nickel-responsive regulatory protein
Authors:Phillips, C.M, Schreiter, E.R, Drennan, C.L.
Deposit date:2010-08-10
Release date:2010-09-08
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structural basis of low-affinity nickel binding to the nickel-responsive transcription factor NikR from Escherichia coli.
Biochemistry, 49, 2010
4XC7
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BU of 4xc7 by Molmil
Isobutyryl-CoA mutase fused with bound butyryl-CoA and without cobalamin or GDP (apo-IcmF)
Descriptor: Butyryl Coenzyme A, Isobutyryl-CoA mutase fused, L(+)-TARTARIC ACID
Authors:Jost, M, Drennan, C.L.
Deposit date:2014-12-17
Release date:2015-02-11
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (3.45 Å)
Cite:Visualization of a radical B12 enzyme with its G-protein chaperone.
Proc.Natl.Acad.Sci.USA, 112, 2015
8USP
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BU of 8usp by Molmil
Structural and biochemical investigations of a HEAT-repeat protein involved in the cytosolic iron-sulfur cluster assembly pathway
Descriptor: DNA repair/transcription protein MET18/MMS19
Authors:Vasquez, S, Drennan, C.L.
Deposit date:2023-10-28
Release date:2023-12-27
Last modified:2024-05-01
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Structural and biochemical investigations of a HEAT-repeat protein involved in the cytosolic iron-sulfur cluster assembly pathway.
Commun Biol, 6, 2023
8USQ
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BU of 8usq by Molmil
Structural and biochemical investigations of a HEAT-repeat protein involved in the cytosolic iron-sulfur cluster assembly pathway
Descriptor: DNA repair/transcription protein MET18/MMS19
Authors:Vasquez, S, Drennan, C.L.
Deposit date:2023-10-29
Release date:2023-12-27
Last modified:2024-05-01
Method:ELECTRON MICROSCOPY (12.77 Å)
Cite:Structural and biochemical investigations of a HEAT-repeat protein involved in the cytosolic iron-sulfur cluster assembly pathway.
Commun Biol, 6, 2023
4XC6
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BU of 4xc6 by Molmil
Isobutyryl-CoA mutase fused with bound adenosylcobalamin, GDP, and Mg (holo-IcmF/GDP)
Descriptor: 5'-DEOXYADENOSINE, ACETATE ION, COBALAMIN, ...
Authors:Jost, M, Drennan, C.L.
Deposit date:2014-12-17
Release date:2015-02-11
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (3.35 Å)
Cite:Visualization of a radical B12 enzyme with its G-protein chaperone.
Proc.Natl.Acad.Sci.USA, 112, 2015
3QI5
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BU of 3qi5 by Molmil
Crystal structure of human alkyladenine DNA glycosylase in complex with 3,N4-ethenocystosine containing duplex DNA
Descriptor: DNA (5'-D(*GP*AP*CP*AP*TP*GP*(EDC)P*TP*TP*GP*CP*CP*T)-3'), DNA (5'-D(*GP*GP*CP*AP*AP*GP*CP*AP*TP*GP*TP*CP*A)-3'), DNA-3-methyladenine glycosylase, ...
Authors:Lingaraju, G.M, Davis, C.A, Setser, J.W, Samson, L.D, Drennan, C.L.
Deposit date:2011-01-26
Release date:2011-03-09
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structural Basis for the Inhibition of Human Alkyladenine DNA Glycosylase (AAG) by 3,N4-Ethenocytosine-containing DNA.
J.Biol.Chem., 286, 2011
1CZH
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BU of 1czh by Molmil
COMPARISONS OF WILD TYPE AND MUTANT FLAVODOXINS FROM ANACYSTIS NIDULANS. STRUCTURAL DETERMINANTS OF THE REDOX POTENTIALS.
Descriptor: FLAVIN MONONUCLEOTIDE, FLAVODOXIN, GLYCEROL, ...
Authors:Hoover, D.M, Drennan, C.L, Metzger, A.L, Osborne, C, Weber, C.H, Pattridge, K.A, Ludwig, M.L.
Deposit date:1999-09-03
Release date:1999-12-29
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.86 Å)
Cite:Comparisons of wild-type and mutant flavodoxins from Anacystis nidulans. Structural determinants of the redox potentials.
J.Mol.Biol., 294, 1999

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