Loading
PDBj
English日本語简体中文繁體中文한국어
✖
ﾒﾆｭｰPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 176 件
3Q5M
DownloadVisualize
BU of 3q5m by Molmil
Crystal structure of Escherichia coli BamD
分子名称: IODIDE ION, UPF0169 lipoprotein yfiO
著者Dong, C, Hou, H, Yang, X, Dong, Y, Shen, Y.
登録日2010-12-28
公開日2011-12-28
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.604 Å)
主引用文献Structure of Escherichia coli BamD and its functional implications in outer membrane protein assembly
Acta Crystallogr.,Sect.D, 68, 2012
1REO
DownloadVisualize
BU of 1reo by Molmil
L-amino acid oxidase from Agkistrodon halys pallas
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, AHPLAAO, CITRIC ACID, ...
著者Zhang, H, Teng, M, Niu, L, Wang, Y, Wang, Y, Liu, Q, Huang, Q, Hao, Q, Dong, Y, Liu, P.
登録日2003-11-07
公開日2004-05-04
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.31 Å)
主引用文献Purification, partial characterization, crystallization and structural determination of AHP-LAAO, a novel L-amino-acid oxidase with cell apoptosis-inducing activity from Agkistrodon halys pallas venom.
Acta Crystallogr.,Sect.D, 60, 2004
4NSR
DownloadVisualize
BU of 4nsr by Molmil
Crystal structure of the Immunity protein
分子名称: Immunity protein
著者Dong, C, Gao, Z.-Q, Dong, Y.-H.
登録日2013-11-28
公開日2014-04-16
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.795 Å)
主引用文献Structural basis for recognition of the type VI spike protein VgrG3 by a cognate immunity protein.
Febs Lett., 588, 2014
4JKZ
DownloadVisualize
BU of 4jkz by Molmil
Crystal structure of ms6564 from mycobacterium smegmatis
分子名称: Transcriptional regulator, TetR family
著者Yang, S.F, Gao, Z.Q, He, Z.G, Dong, Y.H.
登録日2013-03-12
公開日2013-06-26
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structural basis for interaction between Mycobacterium smegmatis Ms6564, a TetR family master regulator, and its target DNA.
J.Biol.Chem., 288, 2013
4XO1
DownloadVisualize
BU of 4xo1 by Molmil
crystal structure of Se-Met GnsA with double mutations
分子名称: Protein GnsA
著者Zhan, L, Gao, Z, Dong, Y.
登録日2015-01-16
公開日2015-07-29
実験手法X-RAY DIFFRACTION (1.802 Å)
主引用文献Crystal structure of GnsA from Escherichia coli
Biochem.Biophys.Res.Commun., 462, 2015
4JL3
DownloadVisualize
BU of 4jl3 by Molmil
Crystal structure of ms6564-dna complex
分子名称: DNA (31-MER), Transcriptional regulator, TetR family
著者Yang, S.F, Gao, Z.Q, He, Z.G, Dong, Y.H.
登録日2013-03-12
公開日2013-06-26
最終更新日2022-08-24
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Structural basis for interaction between Mycobacterium smegmatis Ms6564, a TetR family master regulator, and its target DNA.
J.Biol.Chem., 288, 2013
1MQA
DownloadVisualize
BU of 1mqa by Molmil
Crystal structure of high affinity alphaL I domain in the absence of ligand or metal
分子名称: Integrin alpha-L
著者Shimaoka, T, Xiao, T, Liu, J.-H, Yang, Y, Dong, Y, Jun, C.-D, Zhang, R, Takagi, J, Wang, J.-H, Springer, T.A.
登録日2002-09-15
公開日2003-01-14
最終更新日2021-10-27
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Structures of the aL I domain and its complex with ICAM-1 reveal a shape-shifting pathway for integrin regulation
Cell(Cambridge,Mass.), 112, 2003
1MQ9
DownloadVisualize
BU of 1mq9 by Molmil
Crystal structure of high affinity alphaL I domain with ligand mimetic crystal contact
分子名称: Integrin alpha-L, MANGANESE (II) ION
著者Shimaoka, M, Xiao, T, Liu, J.-H, Yang, Y, Dong, Y, Jun, C.-D, McCormack, A, Zhang, R, Joachimiak, A, Takagi, J, Wang, J.-H, Springer, T.A.
登録日2002-09-15
公開日2003-01-14
最終更新日2021-10-27
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structures of the aL I domain and its complex with ICAM-1 reveal a shape-shifting pathway for integrin regulation
Cell(Cambridge,Mass.), 112, 2003
4I8O
DownloadVisualize
BU of 4i8o by Molmil
Crystal structure of the toxin RnlA from Escherichia coli
分子名称: TOXIN RNLA
著者Wei, Y, Gao, Z.Q, Zhang, H, Dong, Y.H.
登録日2012-12-04
公開日2013-10-23
最終更新日2017-11-15
実験手法X-RAY DIFFRACTION (2.104 Å)
主引用文献Structure-function studies of Escherichia coli RnlA reveal a novel toxin structure involved in bacteriophage resistance.
Mol.Microbiol., 90, 2013
4XVG
DownloadVisualize
BU of 4xvg by Molmil
Crystal structure of Alkylhydroperoxide Reductase Subunit AhpF from Escherichia coli
分子名称: Alkyl hydroperoxide reductase subunit F, FLAVIN-ADENINE DINUCLEOTIDE
著者Chen, C.F, Gao, Z.Q, Dong, Y.H, Liu, Q.S.
登録日2015-01-27
公開日2016-02-24
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Crystal structure of Alkylhydroperoxide Reductase Subunit AhpF from Escherichia coli
To Be Published
4AYX
DownloadVisualize
BU of 4ayx by Molmil
STRUCTURE OF THE HUMAN MITOCHONDRIAL ABC TRANSPORTER, ABCB10 (ROD FORM B)
分子名称: ATP-BINDING CASSETTE SUB-FAMILY B MEMBER 10, CARDIOLIPIN, DODECYL-BETA-D-MALTOSIDE, ...
著者Pike, A.C.W, Shintre, C.A, Li, Q, Kim, J, von Delft, F, Barr, A.J, Das, S, Chaikuad, A, Xia, X, Quigley, A, Dong, Y, Dong, L, Krojer, T, Vollmar, M, Muniz, J.R.C, Bray, J.E, Berridge, G, Chalk, R, Gileadi, O, Burgess-Brown, N, Shrestha, L, Goubin, S, Yang, J, Mahajan, P, Mukhopadhyay, S, Bullock, A.N, Arrowsmith, C.H, Weigelt, J, Bountra, C, Edwards, A.M, Carpenter, E.P.
登録日2012-06-22
公開日2012-07-11
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Structures of Abcb10, a Human ATP-Binding Cassette Transporter in Apo- and Nucleotide-Bound States
Proc.Natl.Acad.Sci.USA, 110, 2013
4JUR
DownloadVisualize
BU of 4jur by Molmil
Crystal structure of the effector Tae4 from Salmonella typhimurium in complex with the immunity Tai4 from Enterobacter cloacae
分子名称: Putative cytoplasmic protein, Uncharacterized protein
著者Zhang, H, Gao, Z.Q, Dong, Y.H.
登録日2013-03-25
公開日2014-02-05
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Insights into the cross-immunity mechanism within effector families of bacteria type VI secretion system from the structure of StTae4-EcTai4 complex
Plos One, 8, 2013
4AYW
DownloadVisualize
BU of 4ayw by Molmil
STRUCTURE OF THE HUMAN MITOCHONDRIAL ABC TRANSPORTER, ABCB10 (PLATE FORM)
分子名称: ATP-BINDING CASSETTE SUB-FAMILY B MEMBER 10, CHOLESTEROL HEMISUCCINATE, DODECYL-BETA-D-MALTOSIDE, ...
著者Pike, A.C.W, Shintre, C.A, Li, Q, Kim, J, von Delft, F, Barr, A.J, Das, S, Chaikuad, A, Xia, X, Quigley, A, Dong, Y, Dong, L, Krojer, T, Vollmar, M, Muniz, J.R.C, Bray, J.E, Berridge, G, Chalk, R, Gileadi, O, Burgess-Brown, N, Shrestha, L, Goubin, S, Yang, J, Mahajan, P, Mukhopadhyay, S, Bullock, A.N, Arrowsmith, C.H, Weigelt, J, Bountra, C, Edwards, A.M, Carpenter, E.P.
登録日2012-06-22
公開日2012-07-11
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (3.3 Å)
主引用文献Structures of Abcb10, a Human ATP-Binding Cassette Transporter in Apo- and Nucleotide-Bound States
Proc.Natl.Acad.Sci.USA, 110, 2013
5IFG
DownloadVisualize
BU of 5ifg by Molmil
Crystal structure of HigA-HigB complex from E. Coli
分子名称: Antitoxin HigA, mRNA interferase HigB
著者Yang, J.S, Zhou, K, Gao, z.Q, Liu, Q.S, Dong, Y.H.
登録日2016-02-26
公開日2017-03-01
実験手法X-RAY DIFFRACTION (2.702 Å)
主引用文献Structural insight into the E. coli HigBA complex
Biochem. Biophys. Res. Commun., 478, 2016
5ID3
DownloadVisualize
BU of 5id3 by Molmil
Solution structure of the pore-forming region of C. elegans Mitochondrial Calcium Uniporter (MCU)
分子名称: Mitochondrial Calcium Uniporter
著者Oxenoid, K, Dong, Y, Cao, C, Cui, T, Sancak, Y, Markhard, A.L, Grabarek, Z, Kong, L, Liu, Z, Ouyang, B, Cong, Y, Mootha, V.K, Chou, J.J, Membrane Protein Structures by Solution NMR (MPSbyNMR)
登録日2016-02-23
公開日2016-05-04
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Architecture of the mitochondrial calcium uniporter.
Nature, 533, 2016
5HW4
DownloadVisualize
BU of 5hw4 by Molmil
Crystal structure of Escherichia coli 16S rRNA methyltransferase RsmI in complex with AdoMet
分子名称: Ribosomal RNA small subunit methyltransferase I, S-ADENOSYLMETHIONINE
著者Zhao, M, Zhang, H, Dong, Y, Gong, Y.
登録日2016-01-28
公開日2016-10-19
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.211 Å)
主引用文献Structural Insights into the Methylation of C1402 in 16S rRNA by Methyltransferase RsmI
Plos One, 11, 2016
5HY3
DownloadVisualize
BU of 5hy3 by Molmil
Crystal structure of Escherichia coli toxin LsoA in complex with T4 phage antitoxin Dmd
分子名称: Antitoxin Dmd, mRNA endoribonuclease LsoA
著者Wan, H, Gao, Z.Q, Dong, Y.H.
登録日2016-02-01
公開日2016-06-22
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (3.1 Å)
主引用文献Structural insights into the inhibition mechanism of bacterial toxin LsoA by bacteriophage antitoxin Dmd
Mol.Microbiol., 101, 2016
5C2O
DownloadVisualize
BU of 5c2o by Molmil
Crystal structure of Streptococcus mutans Deoxycytidylate Deaminase complexed with dTTP
分子名称: MAGNESIUM ION, Putative deoxycytidylate deaminase, THYMIDINE-5'-TRIPHOSPHATE, ...
著者Li, Y.H, Gao, Z.Q, Hou, H.F, Dong, Y.H.
登録日2015-06-16
公開日2016-07-13
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.35 Å)
主引用文献Mechanism of the allosteric regulation of Streptococcus mutans 2'-deoxycytidylate deaminase.
Acta Crystallogr D Struct Biol, 72, 2016
4HFL
DownloadVisualize
BU of 4hfl by Molmil
Crystal structure of the type VI effector Tae4 from Enterobacter cloacae
分子名称: Putative cytoplasmic protein
著者Zhang, H, Gao, Z.Q, Dong, Y.H.
登録日2012-10-05
公開日2013-01-16
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.002 Å)
主引用文献Structure of the type VI effector-immunity complex (Tae4-Tai4) provides novel insights into the inhibition mechanism of the effector by its immunity protein.
J.Biol.Chem., 288, 2013
4HFF
DownloadVisualize
BU of 4hff by Molmil
Crystal structure of the type VI effector-immunity complex Tae4-Tai4 from Salmonella Typhimurium
分子名称: Putative cytoplasmic protein, Putative periplasmic protein
著者Zhang, H, Gao, Z.Q, Dong, Y.H.
登録日2012-10-05
公開日2013-01-16
最終更新日2013-07-24
実験手法X-RAY DIFFRACTION (2.398 Å)
主引用文献Structure of the type VI effector-immunity complex (Tae4-Tai4) provides novel insights into the inhibition mechanism of the effector by its immunity protein
J.Biol.Chem., 288, 2013
5I8J
DownloadVisualize
BU of 5i8j by Molmil
Crystal structure of Dmd from phage RB69
分子名称: Dmd discriminator of mRNA degradation
著者Wei, Y, Zhang, H, Gao, Z.Q, Dong, Y.H.
登録日2016-02-19
公開日2017-02-15
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Structural characterizations of phage antitoxin Dmd and its interactions with bacterial toxin RnlA
Biochem. Biophys. Res. Commun., 472, 2016
4HFK
DownloadVisualize
BU of 4hfk by Molmil
Crystal structure of the type VI effector-immunity complex Tae4-Tai4 from Enterobacter cloacae
分子名称: Putative cytoplasmic protein, Putative uncharacterized protein, SULFATE ION
著者Zhang, H, Gao, Z.Q, Dong, Y.H.
登録日2012-10-05
公開日2013-01-16
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Structure of the type VI effector-immunity complex (Tae4-Tai4) provides novel insights into the inhibition mechanism of the effector by its immunity protein.
J.Biol.Chem., 288, 2013
4E8B
DownloadVisualize
BU of 4e8b by Molmil
Crystal structure of 16S rRNA Methyltransferase RsmE from E.coli
分子名称: Ribosomal RNA small subunit methyltransferase E
著者Zhang, H, Gao, Z.Q, Dong, Y.H.
登録日2012-03-20
公開日2012-09-12
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.249 Å)
主引用文献Insights into the catalytic mechanism of 16S rRNA methyltransferase RsmE (m(3)U1498) from crystal and solution structures
J.Mol.Biol., 423, 2012
5JJO
DownloadVisualize
BU of 5jjo by Molmil
The crystal structure of immunity protein PA5088 from Pseudomonas aeruginosa
分子名称: GOLD ION, Uncharacterized protein
著者Li, Z.Q, Gao, Z.Q, She, Z, Dong, Y.H.
登録日2016-04-24
公開日2016-08-31
実験手法X-RAY DIFFRACTION (2.002 Å)
主引用文献Structural analysis of Pseudomonas aeruginosa H3-T6SS immunity proteins
Febs Lett., 590, 2016
5JKP
DownloadVisualize
BU of 5jkp by Molmil
Crystal structure of immunity protein Pa5087 from Pseudomonas aeruginosa
分子名称: Uncharacterized protein
著者Li, Z.Q, Gao, Z.Q, She, Z, Dong, Y.H.
登録日2016-04-26
公開日2016-08-31
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.106 Å)
主引用文献Structural analysis of Pseudomonas aeruginosa H3-T6SS immunity proteins
Febs Lett., 590, 2016

224004

件を2024-08-21に公開中

PDB statisticsPDBj update infoContact PDBjnumon