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PDB: 240 results

6ZY3
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BU of 6zy3 by Molmil
Cryo-EM structure of MlaFEDB in complex with phospholipid
Descriptor: 1,2-dioleoyl-sn-glycero-3-phosphoethanolamine, ABC transporter maintaining OM lipid asymmetry, cytoplasmic STAS component, ...
Authors:Dong, C.J, Dong, H.H.
Deposit date:2020-07-30
Release date:2020-11-25
Last modified:2024-05-01
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Structural insights into outer membrane asymmetry maintenance in Gram-negative bacteria by MlaFEDB.
Nat.Struct.Mol.Biol., 28, 2021
5OR1
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BU of 5or1 by Molmil
BamA structure of Salmonella enterica
Descriptor: Outer membrane protein assembly factor BamA
Authors:Dong, C, Gu, Y.
Deposit date:2017-08-14
Release date:2018-02-14
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.92 Å)
Cite:BamA beta 16C strand and periplasmic turns are critical for outer membrane protein insertion and assembly.
Biochem. J., 474, 2017
6ZY9
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BU of 6zy9 by Molmil
Cryo-EM structure of MlaFEDB in complex with AMP-PNP
Descriptor: ABC transporter maintaining OM lipid asymmetry, cytoplasmic STAS component, MAGNESIUM ION, ...
Authors:Dong, C.J, Dong, H.H.
Deposit date:2020-07-30
Release date:2020-11-25
Last modified:2024-05-01
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Structural insights into outer membrane asymmetry maintenance in Gram-negative bacteria by MlaFEDB.
Nat.Struct.Mol.Biol., 28, 2021
5L75
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BU of 5l75 by Molmil
A protein structure
Descriptor: FIG000906: Predicted Permease, FIG000988: Predicted permease, Lipopolysaccharide ABC transporter, ...
Authors:Dong, C, Dong, H, Zhang, Z, Paterson, N, Tang, X.
Deposit date:2016-06-01
Release date:2017-08-16
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (3.7 Å)
Cite:Structural and functional insights into the lipopolysaccharide ABC transporter LptB2FG.
Nat Commun, 8, 2017
6ZY4
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BU of 6zy4 by Molmil
Cryo-EM structure of MlaFEDB in complex with ADP
Descriptor: ABC transporter maintaining OM lipid asymmetry, cytoplasmic STAS component, ADENOSINE-5'-DIPHOSPHATE, ...
Authors:Dong, C.J, Dong, H.H.
Deposit date:2020-07-30
Release date:2020-11-25
Last modified:2024-05-01
Method:ELECTRON MICROSCOPY (4.1 Å)
Cite:Structural insights into outer membrane asymmetry maintenance in Gram-negative bacteria by MlaFEDB.
Nat.Struct.Mol.Biol., 28, 2021
6ZY2
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BU of 6zy2 by Molmil
Cryo-EM structure of apo MlaFEDB
Descriptor: ABC transporter maintaining OM lipid asymmetry, cytoplasmic STAS component, Toluene tolerance protein Ttg2A, ...
Authors:Dong, C.J, Dong, H.H.
Deposit date:2020-07-30
Release date:2020-11-25
Last modified:2024-05-01
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:Structural insights into outer membrane asymmetry maintenance in Gram-negative bacteria by MlaFEDB.
Nat.Struct.Mol.Biol., 28, 2021
2AQJ
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BU of 2aqj by Molmil
The structure of tryptophan 7-halogenase (PrnA) suggests a mechanism for regioselective chlorination
Descriptor: CHLORIDE ION, FLAVIN-ADENINE DINUCLEOTIDE, TRYPTOPHAN, ...
Authors:Dong, C, Flecks, S, Unversucht, S, Haupt, C, Van Pee, K.-H, Naismith, J.H, Scottish Structural Proteomics Facility (SSPF)
Deposit date:2005-08-18
Release date:2005-10-04
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Tryptophan 7-halogenase (PrnA) structure suggests a mechanism for regioselective chlorination.
Science, 309, 2005
2AR8
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BU of 2ar8 by Molmil
The structure of tryptophan 7-halogenase (PrnA)suggests a mechanism for regioselective chlorination
Descriptor: 7-CHLOROTRYPTOPHAN, CHLORIDE ION, FLAVIN-ADENINE DINUCLEOTIDE, ...
Authors:Dong, C, Flecks, S, Unversucht, S, Haupt, C, Van Pee, K.H, Naismith, J.H, Scottish Structural Proteomics Facility (SSPF)
Deposit date:2005-08-19
Release date:2005-10-04
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Tryptophan 7-halogenase (PrnA) structure suggests a mechanism for regioselective chlorination.
Science, 309, 2005
5I5H
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BU of 5i5h by Molmil
Ecoli global domain 245-586
Descriptor: Inner membrane protein YejM
Authors:Dong, C, Dong, H.
Deposit date:2016-02-15
Release date:2016-08-17
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Structural insights into cardiolipin transfer from the Inner membrane to the outer membrane by PbgA in Gram-negative bacteria.
Sci Rep, 6, 2016
6L1G
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BU of 6l1g by Molmil
Crystal structure of light-dependent protochlorophyllide oxidoreductase from Synechocystis sp. PCC 6803
Descriptor: Light-dependent protochlorophyllide reductase, NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, SULFATE ION
Authors:Dong, C, Wang, X, Liu, L.
Deposit date:2019-09-29
Release date:2020-04-01
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structures of cyanobacterial light-dependent protochlorophyllide oxidoreductase.
Proc.Natl.Acad.Sci.USA, 117, 2020
7XV7
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BU of 7xv7 by Molmil
Crystal structure of ZYG11B bound to ORF10 peptide
Descriptor: Protein zyg-11 homolog B, SULFATE ION
Authors:Dong, C, Yan, X, Li, Y.
Deposit date:2022-05-21
Release date:2022-06-08
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structural insights into ORF10 recognition by ZYG11B.
Biochem.Biophys.Res.Commun., 616, 2022
5I5D
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BU of 5i5d by Molmil
Salmonella global domain 245
Descriptor: Inner membrane protein YejM
Authors:Dong, C, Dong, H.
Deposit date:2016-02-15
Release date:2017-04-19
Method:X-RAY DIFFRACTION (1.64 Å)
Cite:Structural insights into cardiolipin transfer from the Inner membrane to the outer membrane by PbgA in Gram-negative bacteria.
Sci Rep, 6, 2016
5I5F
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BU of 5i5f by Molmil
Salmonella global domain 191
Descriptor: Inner membrane protein YejM
Authors:Dong, C, Dong, H.
Deposit date:2016-02-15
Release date:2016-08-17
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.84 Å)
Cite:Structural insights into cardiolipin transfer from the Inner membrane to the outer membrane by PbgA in Gram-negative bacteria.
Sci Rep, 6, 2016
3Q5M
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BU of 3q5m by Molmil
Crystal structure of Escherichia coli BamD
Descriptor: IODIDE ION, UPF0169 lipoprotein yfiO
Authors:Dong, C, Hou, H, Yang, X, Dong, Y, Shen, Y.
Deposit date:2010-12-28
Release date:2011-12-28
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.604 Å)
Cite:Structure of Escherichia coli BamD and its functional implications in outer membrane protein assembly
Acta Crystallogr.,Sect.D, 68, 2012
8J49
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BU of 8j49 by Molmil
Crystal structure of OY phytoplasma SAP05 in complex with AtSPL5
Descriptor: Sequence-variable mosaic (SVM) signal sequence domain-containing protein, Squamosa promoter-binding-like protein 5, ZINC ION
Authors:Dong, C, Yan, X, Yuan, X.
Deposit date:2023-04-19
Release date:2024-02-28
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.66 Å)
Cite:Molecular basis of SAP05-mediated ubiquitin-independent proteasomal degradation of transcription factors.
Nat Commun, 15, 2024
8J4A
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BU of 8j4a by Molmil
Crystal structure of OY phytoplasma SAP05 in complex with AtRPN10
Descriptor: 26S proteasome non-ATPase regulatory subunit 4 homolog, Sequence-variable mosaic (SVM) signal sequence domain-containing protein
Authors:Dong, C, Yan, X, Yuan, X.
Deposit date:2023-04-19
Release date:2024-02-28
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.97 Å)
Cite:Molecular basis of SAP05-mediated ubiquitin-independent proteasomal degradation of transcription factors.
Nat Commun, 15, 2024
8J48
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BU of 8j48 by Molmil
Crystal structure of OY phytoplasma SAP05 in complex with AtGATA18
Descriptor: GATA transcription factor 18, Sequence-variable mosaic (SVM) signal sequence domain-containing protein, ZINC ION
Authors:Dong, C, Yan, X, Yuan, X.
Deposit date:2023-04-19
Release date:2024-02-28
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.94 Å)
Cite:Molecular basis of SAP05-mediated ubiquitin-independent proteasomal degradation of transcription factors.
Nat Commun, 15, 2024
8J4B
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BU of 8j4b by Molmil
Crystal structure of OY phytoplasma SAP05 in complex with AtSPL13
Descriptor: Sequence-variable mosaic (SVM) signal sequence domain-containing protein, Squamosa promoter-binding-like protein 13A, ZINC ION
Authors:Dong, C, Yan, X, Yuan, X.
Deposit date:2023-04-19
Release date:2024-02-28
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2 Å)
Cite:Molecular basis of SAP05-mediated ubiquitin-independent proteasomal degradation of transcription factors.
Nat Commun, 15, 2024
4NSR
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BU of 4nsr by Molmil
Crystal structure of the Immunity protein
Descriptor: Immunity protein
Authors:Dong, C, Gao, Z.-Q, Dong, Y.-H.
Deposit date:2013-11-28
Release date:2014-04-16
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.795 Å)
Cite:Structural basis for recognition of the type VI spike protein VgrG3 by a cognate immunity protein.
Febs Lett., 588, 2014
1RQR
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BU of 1rqr by Molmil
Crystal structure and mechanism of a bacterial fluorinating enzyme, product complex
Descriptor: 5'-FLUORO-5'-DEOXYADENOSINE, 5'-fluoro-5'-deoxyadenosine synthase, METHIONINE
Authors:Dong, C, Huang, F, Deng, H, Schaffrath, C, Spencer, J.B, O'Hagan, D, Naismith, J.H.
Deposit date:2003-12-07
Release date:2004-03-02
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.67 Å)
Cite:Crystal structure and mechanism of a bacterial fluorinating enzyme
Nature, 427, 2004
5UBB
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BU of 5ubb by Molmil
Crystal structure of human alpha N-terminal protein methyltransferase 1B
Descriptor: Alpha N-terminal protein methyltransferase 1B, S-ADENOSYLMETHIONINE, UNKNOWN ATOM OR ION
Authors:Dong, C, Zhu, L, Tempel, W, Dong, A, Bountra, C, Arrowsmith, C.H, Edwards, A.M, Min, J, Structural Genomics Consortium (SGC)
Deposit date:2016-12-20
Release date:2017-03-22
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2 Å)
Cite:An asparagine/glycine switch governs product specificity of human N-terminal methyltransferase NTMT2.
Commun Biol, 1, 2018
7Y3A
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BU of 7y3a by Molmil
Crystal structure of TRIM7 bound to 2C
Descriptor: E3 ubiquitin-protein ligase TRIM7,E3 ubiquitin-protein ligase TRIM7,E3 ubiquitin-protein ligase TRIM7,TRIM7-2C
Authors:Dong, C, Yan, X.
Deposit date:2022-06-10
Release date:2022-08-03
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:C-terminal glutamine acts as a C-degron targeted by E3 ubiquitin ligase TRIM7.
Proc.Natl.Acad.Sci.USA, 119, 2022
7Y3B
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BU of 7y3b by Molmil
Crystal structure of TRIM7 bound to GN1
Descriptor: E3 ubiquitin-protein ligase TRIM7,TRIM7-GN1
Authors:Dong, C, Yan, X.
Deposit date:2022-06-10
Release date:2022-08-03
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.76 Å)
Cite:C-terminal glutamine acts as a C-degron targeted by E3 ubiquitin ligase TRIM7.
Proc.Natl.Acad.Sci.USA, 119, 2022
7Y3C
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BU of 7y3c by Molmil
Crystal structure of TRIM7 bound to RACO-1
Descriptor: E3 ubiquitin-protein ligase TRIM7,E3 ubiquitin-protein ligase TRIM7,TRIM7-RACO-1
Authors:Dong, C, Yan, X.
Deposit date:2022-06-10
Release date:2022-08-03
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.71 Å)
Cite:C-terminal glutamine acts as a C-degron targeted by E3 ubiquitin ligase TRIM7.
Proc.Natl.Acad.Sci.USA, 119, 2022
4HZ9
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BU of 4hz9 by Molmil
Crystal structure of the type VI native effector-immunity complex Tae3-Tai3 from Ralstonia pickettii
Descriptor: Putative cytoplasmic protein, Putative periplasmic protein
Authors:Dong, C, Zhang, H, Gao, Z.Q, Dong, Y.H.
Deposit date:2012-11-14
Release date:2013-08-21
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structural insights into the inhibition of type VI effector Tae3 by its immunity protein Tai3
Biochem.J., 454, 2013

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