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PDB: 30 results

1U4A
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BU of 1u4a by Molmil
Solution structure of human SUMO-3 C47S
Descriptor: Ubiquitin-like protein SMT3A
Authors:Ding, H, Xu, Y, Dai, H, Tang, Y, Wu, J, Shi, Y.
Deposit date:2004-07-23
Release date:2005-03-08
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution Structure of Human SUMO-3 C47S and Its Binding Surface for Ubc9
Biochemistry, 44, 2005
2FQM
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BU of 2fqm by Molmil
Crystal structure of the oligomerization domain of the phosphoprotein of vesicular stomatitis virus
Descriptor: Phosphoprotein
Authors:Ding, H, Green, T.J, Lu, S, Luo, M.
Deposit date:2006-01-18
Release date:2006-02-07
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal structure of the oligomerization domain of the phosphoprotein of vesicular stomatitis virus
J.Virol., 80, 2006
8W7E
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BU of 8w7e by Molmil
Design, synthesis and biological evaluations of novel small molecular hyper-activators of human caseinolytic peptidase P (hClpP)
Descriptor: 3-[(3-chlorophenyl)methyl]-6-[(4-chlorophenyl)methyl]-2,4-dihydro-1H-pyrido[2,3-c][2,7]naphthyridin-5-one, ATP-dependent Clp protease proteolytic subunit, mitochondrial
Authors:Jiang, J.-X, Ding, H, Chen, M.-R, Lu, M.-L, Sun, H.-Y, Xiao, Y.-B.
Deposit date:2023-08-30
Release date:2024-09-04
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Design, synthesis and biological evaluations of novel small molecular hyper-activators of human caseinolytic peptidase P (hClpP)
To Be Published
8W7C
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Activation of mitochondrial Caseinolytic Protease P (ClpP) induces selective cancer cell lethality
Descriptor: 11-[(3-chlorophenyl)methyl]-7-[[4-(trifluoromethyl)phenyl]methyl]-2,5,7,11-tetrazatricyclo[7.4.0.0^{2,6}]trideca-1(9),3,5-trien-8-one, ATP-dependent Clp protease proteolytic subunit, mitochondrial
Authors:Jiang, J.-X, Ding, H, Lu, M.-L, Chen, M.-R, Sun, H.-Y, Xiao, Y.-B.
Deposit date:2023-08-30
Release date:2024-09-04
Method:X-RAY DIFFRACTION (3 Å)
Cite:Activation of mitochondrial Caseinolytic Protease P (ClpP) induces selective cancer cell lethality
To Be Published
1TMW
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BU of 1tmw by Molmil
Solution structure of Human Coactosin Like Protein D123N
Descriptor: Coactosin-like protein
Authors:Dai, H, Wu, J, Xu, Y, Tang, Y, Ding, H, Shi, Y.
Deposit date:2004-06-11
Release date:2005-06-28
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Study on Solution Structure and Its binding function to F-actin
To be Published
8WUZ
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BU of 8wuz by Molmil
Development of 2-imino-2,3,5,6,7,8-hexahydropyrido[4,3-d]pyrimidin-4(1H)-one derivatives as human caseinolytic peptidase P (hClpP) activators
Descriptor: 5-[(3-fluorophenyl)methyl]-9-[[4-(trifluoromethyl)phenyl]methyl]-1,5,9,11-tetrazatricyclo[8.4.0.0^{2,7}]tetradeca-2(7),10-dien-8-one, ATP-dependent Clp protease proteolytic subunit, mitochondrial, ...
Authors:Jiang, J.-X, Ding, H, Chen, M.-R, Lu, M.-L, Sun, H.-Y, Xiao, Y.-B.
Deposit date:2023-10-22
Release date:2024-10-23
Last modified:2025-04-09
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Development of novel imipridone derivatives with potent anti-cancer activities as human caseinolytic peptidase P (hClpP) activators.
Bioorg.Chem., 153, 2024
8XJW
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BU of 8xjw by Molmil
Structure of the Argonaute protein from Kurthia massiliensis in complex with guide DNA and 19-mer target RNA
Descriptor: KmAgo, MANGANESE (II) ION, guide DNA, ...
Authors:Tao, X, Ding, H, Wu, S.
Deposit date:2023-12-22
Release date:2024-12-18
Last modified:2025-07-16
Method:ELECTRON MICROSCOPY (2.84 Å)
Cite:Structural and mechanistic insights into a mesophilic prokaryotic Argonaute.
Nucleic Acids Res., 52, 2024
8XHS
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BU of 8xhs by Molmil
Cryo-EM structure of free-state KmAgo
Descriptor: KmAgo
Authors:Tao, X, Ding, H, Wu, S.
Deposit date:2023-12-18
Release date:2024-12-25
Last modified:2025-07-16
Method:ELECTRON MICROSCOPY (2.85 Å)
Cite:Structural and mechanistic insights into a mesophilic prokaryotic Argonaute.
Nucleic Acids Res., 52, 2024
8XK4
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BU of 8xk4 by Molmil
Structure of the Argonaute protein from Kurthia massiliensis in complex with guide DNA and 19-mer target DNA in target-released state
Descriptor: 2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE, KmAgo, MANGANESE (II) ION, ...
Authors:Tao, X, Ding, H, Wu, S.
Deposit date:2023-12-22
Release date:2025-01-01
Last modified:2025-07-16
Method:ELECTRON MICROSCOPY (2.94 Å)
Cite:Structural and mechanistic insights into a mesophilic prokaryotic Argonaute.
Nucleic Acids Res., 52, 2024
8XK0
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BU of 8xk0 by Molmil
Structure of the Argonaute protein from Kurthia massiliensis in complex with guide DNA and 19-mer target DNA in pre-cleavage state
Descriptor: KmAgo, MANGANESE (II) ION, guide DNA, ...
Authors:Tao, X, Ding, H, Wu, S.
Deposit date:2023-12-22
Release date:2024-12-18
Last modified:2025-07-16
Method:ELECTRON MICROSCOPY (2.96 Å)
Cite:Structural and mechanistic insights into a mesophilic prokaryotic Argonaute.
Nucleic Acids Res., 52, 2024
8XHV
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BU of 8xhv by Molmil
Structure of the Argonaute protein from Kurthia massiliensis in complex with guide DNA
Descriptor: KmAgo, MANGANESE (II) ION, guide DNA
Authors:Tao, X, Ding, H, Wu, S.
Deposit date:2023-12-18
Release date:2025-01-01
Last modified:2025-07-16
Method:ELECTRON MICROSCOPY (2.81 Å)
Cite:Structural and mechanistic insights into a mesophilic prokaryotic Argonaute.
Nucleic Acids Res., 52, 2024
8XJX
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BU of 8xjx by Molmil
Structure of the Argonaute protein from Kurthia massiliensis in complex with guide DNA and 19-mer target DNA
Descriptor: KmAgo, MANGANESE (II) ION, guide DNA, ...
Authors:Tao, X, Ding, H, Wu, S.
Deposit date:2023-12-22
Release date:2025-01-01
Last modified:2025-07-16
Method:ELECTRON MICROSCOPY (2.78 Å)
Cite:Structural and mechanistic insights into a mesophilic prokaryotic Argonaute.
Nucleic Acids Res., 52, 2024
8XK3
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BU of 8xk3 by Molmil
Structure of the Argonaute protein from Kurthia massiliensis in complex with guide DNA and 19-mer target DNA in target-cleaved state
Descriptor: KmAgo, MANGANESE (II) ION, guide DNA, ...
Authors:Tao, X, Ding, H, Wu, S.
Deposit date:2023-12-22
Release date:2025-01-01
Last modified:2025-07-16
Method:ELECTRON MICROSCOPY (2.76 Å)
Cite:Structural and mechanistic insights into a mesophilic prokaryotic Argonaute.
Nucleic Acids Res., 52, 2024
5X61
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BU of 5x61 by Molmil
Crystal structure of Acetylcholinesterase Catalytic Subunit of the Malaria Vector Anopheles Gambiae, 3.4 A
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-3)-2-acetamido-2-deoxy-beta-D-glucopyranose, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, AMMONIUM ION, ...
Authors:Han, Q, Robinson, H, Ding, H, Wong, D.M, Lam, P.C.H, Totrov, M.M, Carlier, P.R, Li, J.
Deposit date:2017-02-20
Release date:2017-03-15
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (3.4 Å)
Cite:Crystal structure of acetylcholinesterase catalytic subunits of the malaria vector Anopheles gambiae
Insect Sci., 2017
1YIY
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BU of 1yiy by Molmil
Aedes aegypti kynurenine aminotransferase
Descriptor: 4'-DEOXY-4'-AMINOPYRIDOXAL-5'-PHOSPHATE, BROMIDE ION, kynurenine aminotransferase; glutamine transaminase K
Authors:Han, Q, Gao, Y.G, Robinson, H, Ding, H, Wilson, S, Li, J.
Deposit date:2005-01-13
Release date:2005-05-10
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structures of Aedes aegypti kynurenine aminotransferase.
FEBS J., 272, 2005
1YIZ
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BU of 1yiz by Molmil
Aedes aegypti kynurenine aminotrasferase
Descriptor: BROMIDE ION, kynurenine aminotransferase; glutamine transaminase
Authors:Han, Q, Gao, Y.G, Robinson, H, Ding, H, Wilson, S, Li, J.
Deposit date:2005-01-13
Release date:2005-05-10
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Crystal structures of Aedes aegypti kynurenine aminotransferase.
FEBS J., 272, 2005
5YDJ
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BU of 5ydj by Molmil
Crystal structure of anopheles gambiae acetylcholinesterase in complex with PMSF
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Acetylcholinesterase, ...
Authors:Han, Q, Guan, H, Ding, H, Liao, C, Robinson, H, Li, J.
Deposit date:2017-09-13
Release date:2018-03-07
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (3.04 Å)
Cite:Crystal structures of acetylcholinesterase of the malaria vector Anopheles gambiae reveal a polymerization interface, ligand binding residues and post translational modifications
To Be Published
5YDI
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BU of 5ydi by Molmil
Crystal structure of acetylcholinesterase catalytic subunits of the malaria vector anopheles gambiae, new crystal packing
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Acetylcholinesterase, GLYCEROL, ...
Authors:Han, Q, Guan, H, Ding, H, Liao, C, Robinson, H, Li, J.
Deposit date:2017-09-13
Release date:2018-03-07
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (3.45 Å)
Cite:Crystal structures of acetylcholinesterase of the malaria vector Anopheles gambiae reveal a polymerization interface, ligand binding residues and post translational modifications
To Be Published
5YDH
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BU of 5ydh by Molmil
Crystal structure of acetylcholinesterase catalytic subunits of the malaria vector anopheles gambiae, 3.2 A
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, Acetylcholinesterase, ...
Authors:Han, Q, Guan, H, Robinson, H, Ding, H, Liao, C, Li, J.
Deposit date:2017-09-13
Release date:2018-03-07
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (3.21 Å)
Cite:Crystal structures of acetylcholinesterase of the malaria vector Anopheles gambiae reveal a polymerization interface, ligand binding residues and post translational modifications
To Be Published
4HU8
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BU of 4hu8 by Molmil
Crystal Structure of a Bacterial Ig-like Domain Containing GH10 Xylanase from Termite Gut
Descriptor: GH10 Xylanase, GLYCEROL, SULFATE ION
Authors:Han, Q, Liu, N, Robinson, H, Cao, L, Qian, C, Wang, Q, Xie, L, Ding, H, Wang, Q, Huang, Y, Li, J, Zhou, Z.
Deposit date:2012-11-02
Release date:2013-09-18
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2 Å)
Cite:Biochemical characterization and crystal structure of a GH10 xylanase from termite gut bacteria reveal a novel structural feature and significance of its bacterial Ig-like domain.
Biotechnol.Bioeng., 110, 2013
3K40
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BU of 3k40 by Molmil
Crystal structure of Drosophila 3,4-dihydroxyphenylalanine decarboxylase
Descriptor: Aromatic-L-amino-acid decarboxylase, GLYCEROL
Authors:Han, Q, Ding, H, Robinson, H, Christensen, B.M, Li, J.
Deposit date:2009-10-05
Release date:2010-02-02
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Crystal structure and substrate specificity of Drosophila 3,4-dihydroxyphenylalanine decarboxylase
Plos One, 5, 2010
2O2F
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BU of 2o2f by Molmil
Solution structure of the anti-apoptotic protein Bcl-2 in complex with an acyl-sulfonamide-based ligand
Descriptor: 4-(4-BENZYL-4-METHOXYPIPERIDIN-1-YL)-N-[(4-{[1,1-DIMETHYL-2-(PHENYLTHIO)ETHYL]AMINO}-3-NITROPHENYL)SULFONYL]BENZAMIDE, Apoptosis regulator Bcl-2
Authors:Bruncko, M, Oost, T.K, Belli, B.A, Ding, H, Joseph, M.K, Kunzer, A, Martineau, D, McClellan, W.J, Mitten, M, Ng, S.C, Nimmer, P.M, Oltersdorf, T, Park, C.M, Petros, A.M, Shoemaker, A.R, Song, X, Wang, X, Wendt, M.D, Zhang, H, Fesik, S.W, Rosenberg, S.H, Elmore, S.W.
Deposit date:2006-11-29
Release date:2007-02-27
Last modified:2023-12-27
Method:SOLUTION NMR
Cite:Studies Leading to Potent, Dual Inhibitors of Bcl-2 and Bcl-xL.
J.Med.Chem., 50, 2007
2O21
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BU of 2o21 by Molmil
Solution structure of the anti-apoptotic protein Bcl-2 in complex with an acyl-sulfonamide-based ligand
Descriptor: 3-NITRO-N-{4-[2-(2-PHENYLETHYL)-1,3-BENZOTHIAZOL-5-YL]BENZOYL}-4-{[2-(PHENYLSULFANYL)ETHYL]AMINO}BENZENESULFONAMIDE, Apoptosis regulator Bcl-2
Authors:Bruncko, M, Oost, T.K, Belli, B.A, Ding, H, Joseph, M.K, Kunzer, A, Martineau, D, McClellan, W.J, Mitten, M, Ng, S.C, Nimmer, P.M, Oltersdorf, T, Park, C.M, Petros, A.M, Shoemaker, A.R, Song, X, Wang, X, Wendt, M.D, Zhang, H, Fesik, S.W, Rosenberg, S.H, Elmore, S.W.
Deposit date:2006-11-29
Release date:2007-02-27
Last modified:2023-12-27
Method:SOLUTION NMR
Cite:Studies Leading to Potent, Dual Inhibitors of Bcl-2 and Bcl-xL.
J.Med.Chem., 50, 2007
2O22
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BU of 2o22 by Molmil
Solution structure of the anti-apoptotic protein Bcl-2 in complex with an acyl-sulfonamide-based ligand
Descriptor: Apoptosis regulator Bcl-2, N-[(4-{[1,1-dimethyl-2-(phenylthio)ethyl]amino}-3-nitrophenyl)sulfonyl]-4-(4,4-dimethylpiperidin-1-yl)benzamide
Authors:Bruncko, M, Oost, T.K, Belli, B.A, Ding, H, Joseph, M.K, Kunzer, A, Martineau, D, McClellan, W.J, Mitten, M, Ng, S.C, Nimmer, P.M, Oltersdorf, T, Park, C.M, Petros, A.M, Shoemaker, A.R, Song, X, Wang, X, Wendt, M.D, Zhang, H, Fesik, S.W, Rosenberg, S.H, Elmore, S.W.
Deposit date:2006-11-29
Release date:2007-02-27
Last modified:2023-12-27
Method:SOLUTION NMR
Cite:Studies Leading to Potent, Dual Inhibitors of Bcl-2 and Bcl-xL.
J.Med.Chem., 50, 2007
2O2M
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BU of 2o2m by Molmil
Solution structure of the anti-apoptotic protein Bcl-xL in complex with an acyl-sulfonamide-based ligand
Descriptor: 4-(4-BENZYL-4-METHOXYPIPERIDIN-1-YL)-N-[(4-{[1,1-DIMETHYL-2-(PHENYLTHIO)ETHYL]AMINO}-3-NITROPHENYL)SULFONYL]BENZAMIDE, Apoptosis regulator Bcl-X
Authors:Bruncko, M, Oost, T.K, Belli, B.A, Ding, H, Joseph, M.K, Kunzer, A, Martineau, D, McClellan, W.J, Mitten, M, Ng, S.C, Nimmer, P.M, Oltersdorf, T, Park, C.M, Petros, A.M, Shoemaker, A.R, Song, X, Wang, X, Wendt, M.D, Zhang, H, Fesik, S.W, Rosenberg, S.H, Elmore, S.W.
Deposit date:2006-11-30
Release date:2007-02-27
Last modified:2023-12-27
Method:SOLUTION NMR
Cite:Studies Leading to Potent, Dual Inhibitors of Bcl-2 and Bcl-xL.
J.Med.Chem., 50, 2007

 

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