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PDB: 76 件

5KOP
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Arabidopsis thaliana fucosyltransferase 1 (FUT1) in its apo-form
分子名称: 1,2-ETHANEDIOL, CHLORIDE ION, Galactoside 2-alpha-L-fucosyltransferase
著者Rocha, J, de Sanctis, D, Breton, C.
登録日2016-07-01
公開日2016-10-12
最終更新日2018-10-24
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Structure of Arabidopsis thaliana FUT1 Reveals a Variant of the GT-B Class Fold and Provides Insight into Xyloglucan Fucosylation.
Plant Cell, 28, 2016
6TKI
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Tsetse thrombin inhibitor in complex with human alpha-thrombin - tetragonal form at 12.7keV
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, SODIUM ION, Thrombin heavy chain, ...
著者Calisto, B.M, Ripoll-Rozada, J, de Sanctis, D, Pereira, P.J.B.
登録日2019-11-28
公開日2020-11-04
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Sulfotyrosine-Mediated Recognition of Human Thrombin by a Tsetse Fly Anticoagulant Mimics Physiological Substrates.
Cell Chem Biol, 28, 2021
6TKL
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Non-cleavable tsetse thrombin inhibitor in complex with human alpha-thrombin
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, GLYCEROL, Prothrombin, ...
著者Calisto, B.M, Ripoll-Rozada, J, de Sanctis, D, Pereira, P.J.B.
登録日2019-11-28
公開日2020-11-04
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.3 Å)
主引用文献Sulfotyrosine-Mediated Recognition of Human Thrombin by a Tsetse Fly Anticoagulant Mimics Physiological Substrates.
Cell Chem Biol, 28, 2021
6TKG
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Tsetse thrombin inhibitor in complex with human alpha-thrombin - orthorhombic form at 12keV
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, GLYCEROL, Prothrombin, ...
著者Calisto, B.M, Ripoll-Rozada, J, de Sanctis, D, Pereira, P.J.B.
登録日2019-11-28
公開日2020-11-04
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.35 Å)
主引用文献Sulfotyrosine-Mediated Recognition of Human Thrombin by a Tsetse Fly Anticoagulant Mimics Physiological Substrates.
Cell Chem Biol, 28, 2021
6TKJ
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Tsetse thrombin inhibitor in complex with human alpha-thrombin - tetragonal form at 7keV
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Thrombin heavy chain, Thrombin light chain, ...
著者Calisto, B.M, Ripoll-Rozada, J, de Sanctis, D, Pereira, P.J.B.
登録日2019-11-28
公開日2020-11-04
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.81 Å)
主引用文献Sulfotyrosine-Mediated Recognition of Human Thrombin by a Tsetse Fly Anticoagulant Mimics Physiological Substrates.
Cell Chem Biol, 28, 2021
6TKH
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Tsetse thrombin inhibitor in complex with human alpha-thrombin - orthorhombic form at 7keV
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, GLYCEROL, SODIUM ION, ...
著者Calisto, B.M, Ripoll-Rozada, J, de Sanctis, D, Pereira, P.J.B.
登録日2019-11-28
公開日2020-11-04
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Sulfotyrosine-Mediated Recognition of Human Thrombin by a Tsetse Fly Anticoagulant Mimics Physiological Substrates.
Cell Chem Biol, 28, 2021
8PW0
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Manganese-dependent transcriptional repressor DR2539 complexed with manganese and bound to dr1709 promotor
分子名称: DNA (5'-D(*TP*AP*TP*TP*TP*TP*AP*GP*GP*CP*GP*CP*GP*AP*CP*TP*AP*AP*AP*AP*T)-3'), GLYCEROL, Iron dependent repressor, ...
著者Mota, C, De Sanctis, D.
登録日2023-07-18
公開日2024-05-08
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Metal ion activation and DNA recognition by the Deinococcus radiodurans manganese sensor DR2539.
Febs J., 2024
8PVT
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Manganese-dependent transcriptional repressor DR2539 complexed with cadmium (SAD 7 keV)
分子名称: CADMIUM ION, Iron dependent repressor, putative
著者Mota, C, De Sanctis, D.
登録日2023-07-18
公開日2024-05-08
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Metal ion activation and DNA recognition by the Deinococcus radiodurans manganese sensor DR2539.
Febs J., 2024
8RKI
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Molecular basis of ZP3/ZP1 heteropolymerization: crystal structure of a native vertebrate egg coat filament fragment
分子名称: Choriogenin H, YTTERBIUM (III) ION, Zona pellucida sperm-binding protein 3, ...
著者Wiseman, B, Zamora-Caballero, S, de Sanctis, D, Yasumasu, S, Jovine, L.
登録日2023-12-25
公開日2024-03-13
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (4.2 Å)
主引用文献ZP2 cleavage blocks polyspermy by modulating the architecture of the egg coat.
Cell, 187, 2024
8RKG
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Crystal structure of tetrameric collagenase-cleaved Xenopus ZP2-N2N3 (cleaved xZP2-N2N3)
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, BICINE, ...
著者Nishio, S, de Sanctis, D, Jovine, L.
登録日2023-12-25
公開日2024-03-13
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献ZP2 cleavage blocks polyspermy by modulating the architecture of the egg coat.
Cell, 187, 2024
4ABY
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BU of 4aby by Molmil
Crystal structure of Deinococcus radiodurans RecN head domain
分子名称: DNA REPAIR PROTEIN RECN
著者Pellegrino, S, Radzimanowski, J, de Sanctis, D, McSweeney, S, Timmins, J.
登録日2011-12-12
公開日2012-12-12
最終更新日2012-12-26
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Structural and Functional Characterization of an Smc-Like Protein Recn: New Insights Into Double-Strand Break Repair.
Structure, 20, 2012
4ABX
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Crystal structure of Deinococcus radiodurans RecN coiled-coil domain
分子名称: DNA REPAIR PROTEIN RECN
著者Pellegrino, S, Radzimanowski, J, de Sanctis, D, McSweeney, S, Timmins, J.
登録日2011-12-12
公開日2012-12-12
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.041 Å)
主引用文献Structural and Functional Characterization of an Smc-Like Protein Recn: New Insights Into Double-Strand Break Repair.
Structure, 20, 2012
4AWE
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BU of 4awe by Molmil
The Crystal Structure of Chrysonilia sitophila endo-beta-D-1,4- mannanase
分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Goncalves, A.M.D, Silva, C.S, De Sanctis, D, Bento, I.
登録日2012-06-01
公開日2012-10-31
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Endo-Beta-D-1,4-Mannanase from Chrysonilia Sitophila Displays a Novel Loop Arrangement for Substrate Selectivity
Acta Crystallogr.,Sect.D, 68, 2012
4AD8
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BU of 4ad8 by Molmil
Crystal structure of a deletion mutant of Deinococcus radiodurans RecN
分子名称: DNA REPAIR PROTEIN RECN
著者Pellegrino, S, Radzimanowski, J, de Sanctis, D, McSweeney, S, Timmins, J.
登録日2011-12-22
公開日2012-12-12
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (3.998 Å)
主引用文献Structural and Functional Characterization of an Smc-Like Protein Recn: New Insights Into Double-Strand Break Repair.
Structure, 20, 2012
4BAJ
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BU of 4baj by Molmil
MYCOBACTERIUM TUBERCULOSIS CHORISMATE SYNTHASE after exposure to 266nm UV laser
分子名称: ACETATE ION, CHORISMATE SYNTHASE
著者Pereira, P.J.B, Royant, A, Panjikar, S, de Sanctis, D.
登録日2012-09-14
公開日2013-04-17
最終更新日2019-03-06
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献In-house UV radiation-damage-induced phasing of selenomethionine-labeled protein structures.
J. Struct. Biol., 181, 2013
4BAG
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BU of 4bag by Molmil
Feruloyl Esterase Domain of XYNY from Clostridium thermocellum after exposure to 266nm UV laser
分子名称: CADMIUM ION, ENDO-1,4-BETA-XYLANASE Y, GLYCEROL
著者Pereira, P.J.B, de Sanctis, D.
登録日2012-09-14
公開日2013-04-17
最終更新日2018-06-06
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献In-House Uv Radiation-Damage-Induced Phasing of Selenomethionine-Labeled Protein Structures.
J.Struct.Biol., 181, 2013
4BAI
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BU of 4bai by Molmil
Mycobacterium tuberculosis Chorismate synthase before exposure to 266 nm UV laser
分子名称: ACETATE ION, CHORISMATE SYNTHASE
著者Pereira, P.J.B, Royant, A, Panjikar, S, de Sanctis, D.
登録日2012-09-14
公開日2013-04-17
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献In-house UV radiation-damage-induced phasing of selenomethionine-labeled protein structures.
J. Struct. Biol., 181, 2013
4C14
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The crystal strucuture of PpAzoR in complex with reactive black 5 (RB5)
分子名称: DODECAETHYLENE GLYCOL, FMN-DEPENDENT NADH-AZOREDUCTASE 1, [5-[3-[2-[[4-[2-[1-azanyl-7-[2-[4-[methyl-bis(oxidanyl)-$l^{4}-sulfanyl]phenyl]hydrazinyl]-8-oxidanyl-3,6-bis[tris(oxidanyl)-$l^{4}-sulfanyl]naphthalen-2-yl]hydrazinyl]phenyl]-bis(oxidanyl)-$l^{4}-sulfanyl]ethoxy]-7,8-dimethyl-2,4-bis(oxidanylidene)benzo[g]pteridin-10-yl]-2,3,4-tris(oxidanyl)pentyl] dihydrogen phosphate
著者Goncalves, A.M.D, de Sanctis, D, Bento, I.
登録日2013-08-09
公開日2013-10-30
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献The crystal structure of Pseudomonas putida azoreductase - the active site revisited.
FEBS J., 280, 2013
4E05
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BU of 4e05 by Molmil
Anophelin from the malaria vector inhibits thrombin through a novel reverse-binding mechanism
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, SODIUM ION, Salivary anti-thrombin peptide anophelin, ...
著者Figueiredo, A.C, de Sanctis, D, Gutierrez-Gallego, R, Cereija, T.B, Macedo-Ribeiro, S, Fuentes-Prior, P, Pereira, P.J.B.
登録日2012-03-02
公開日2012-12-05
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.304 Å)
主引用文献Unique thrombin inhibition mechanism by anophelin, an anticoagulant from the malaria vector.
Proc.Natl.Acad.Sci.USA, 109, 2012
4E06
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BU of 4e06 by Molmil
Anophelin from the malaria vector inhibits thrombin through a novel reverse-binding mechanism
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, SODIUM ION, Salivary anti-thrombin peptide anophelin, ...
著者Figueiredo, A.C, de Sanctis, D, Gutierrez-Gallego, R, Cereija, T.B, Macedo-Ribeiro, S, Fuentes-Prior, P, Pereira, P.J.B.
登録日2012-03-02
公開日2012-12-05
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (3.196 Å)
主引用文献Unique thrombin inhibition mechanism by anophelin, an anticoagulant from the malaria vector.
Proc.Natl.Acad.Sci.USA, 109, 2012
4C0X
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The crystal strucuture of PpAzoR in complex with anthraquinone-2- sulfonate
分子名称: 9,10-dioxo-9,10-dihydroanthracene-2-sulfonic acid, FLAVIN MONONUCLEOTIDE, FMN-DEPENDENT NADH-AZOREDUCTASE 1, ...
著者Goncalves, A.M.D, de Sanctis, D, Bento, I.
登録日2013-08-08
公開日2013-10-30
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (1.499 Å)
主引用文献The Crystal Structure of Pseudomonas Putida Azor: The Active Site Revisited.
FEBS J., 280, 2013
4C0W
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The crystal strucuture of native PpAzoR
分子名称: DODECAETHYLENE GLYCOL, FLAVIN MONONUCLEOTIDE, FMN-DEPENDENT NADH-AZOREDUCTASE 1
著者Goncalves, A.M.D, de Sanctis, D, Bento, I.
登録日2013-08-08
公開日2013-10-30
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献The Crystal Structure of Pseudomonas Putida Azor: The Active Site Revisited.
FEBS J., 280, 2013
2YFC
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BU of 2yfc by Molmil
STRUCTURAL AND FUNCTIONAL INSIGHTS OF DR2231 PROTEIN, THE MAZG-LIKE NUCLEOSIDE TRIPHOSPHATE PYROPHOSPHOHYDROLASE FROM DEINOCOCCUS RADIODURANS, COMPLEXED WITH Mn and dUMP
分子名称: 2'-DEOXYURIDINE 5'-MONOPHOSPHATE, GLYCEROL, MANGANESE (II) ION, ...
著者Goncalves, A.M.D, De Sanctis, D, Mcsweeney, S.M.
登録日2011-04-05
公開日2011-07-06
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2.01 Å)
主引用文献Structural and Functional Insights Into Dr2231 Protein, the Mazg-Like Nucleoside Triphosphate Pyrophosphohydrolase from Deinococcus Radiodurans.
J.Biol.Chem., 286, 2011
2YEU
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BU of 2yeu by Molmil
Structural and functional insights of DR2231 protein, the MazG-like nucleoside triphosphate pyrophosphohydrolase from Deinococcus radiodurans, complex with Gd
分子名称: DR2231, GADOLINIUM ATOM, GLYCEROL, ...
著者Goncalves, A.M.D, de Sanctis, D, McSweeney, S.M.
登録日2011-03-30
公開日2011-07-06
最終更新日2011-09-07
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structural and Functional Insights Into Dr2231 Protein, the Mazg-Like Nucleoside Triphosphate Pyrophosphohydrolase from Deinococcus Radiodurans.
J.Biol.Chem., 286, 2011
2YFD
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BU of 2yfd by Molmil
STRUCTURAL AND FUNCTIONAL INSIGHTS OF DR2231 PROTEIN, THE MAZG-LIKE NUCLEOSIDE TRIPHOSPHATE PYROPHOSPHOHYDROLASE FROM DEINOCOCCUS RADIODURANS, COMPLEXED WITH Mg and dUMP
分子名称: 2'-DEOXYURIDINE 5'-MONOPHOSPHATE, ACETATE ION, CHLORIDE ION, ...
著者Goncalves, A.M.D, De Sanctis, D, Mcsweeney, S.M.
登録日2011-04-05
公開日2011-07-06
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (1.767 Å)
主引用文献Structural and Functional Insights Into Dr2231 Protein, the Mazg-Like Nucleoside Triphosphate Pyrophosphohydrolase from Deinococcus Radiodurans.
J.Biol.Chem., 286, 2011

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