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PDB: 48 results

2KX5
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BU of 2kx5 by Molmil
Recognition of HIV TAR RNA by peptide mimetic of Tat protein
Descriptor: Cyclic peptide mimetic of Tat protein, HIV TAR RNA
Authors:Davidson, A, Patora-Komisarska, K, Robinson, J, Varani, G.
Deposit date:2010-04-26
Release date:2010-07-07
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:Essential structural requirements for specific recognition of HIV TAR RNA by peptide mimetics of Tat protein.
Nucleic Acids Res., 39, 2011
2L8H
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BU of 2l8h by Molmil
Chemical probe bound to HIV TAR RNA
Descriptor: 4-methoxynaphthalen-2-amine, ARGININE, HIV TAR RNA
Authors:Davidson, A, Begley, D, Lau, C, Varani, G.
Deposit date:2011-01-12
Release date:2011-03-23
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:A Small-Molecule Probe Induces a Conformation in HIV TAR RNA Capable of Binding Drug-Like Fragments.
J.Mol.Biol., 410, 2011
2KDQ
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Simultaneous recognition of HIV-1 TAR RNA bulge and loop sequences by cyclic peptide mimic of Tat protein
Descriptor: HIV-1 TAR RNA, L-22 CYCLIC PEPTIDE
Authors:Davidson, A, Leeper, T.C, Varani, G.
Deposit date:2009-01-14
Release date:2009-06-23
Last modified:2022-03-16
Method:SOLUTION NMR
Cite:Simultaneous recognition of HIV-1 TAR RNA bulge and loop sequences by cyclic peptide mimics of Tat protein
Proc.Natl.Acad.Sci.USA, 106, 2009
4PUE
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BU of 4pue by Molmil
Extracellulr Xylanase from Geobacillus stearothermophilus: E159Q mutant, with xylotetraose in active site
Descriptor: CHLORIDE ION, Endo-1,4-beta-xylanase, ZINC ION, ...
Authors:Dann, R.D, Solomon, H.V, Lansky, S, Ben-David, A, Lavid, N, Salama, R, Shoham, Y, Shoham, G.
Deposit date:2014-03-13
Release date:2015-03-18
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Extracellulr Xylanase from Geobacillus stearothermophilus: E159Q mutant, with xylotetraose in active site.
To be Published
4PRW
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BU of 4prw by Molmil
Xylanase T6 (XT6) from Geobacillus Stearothermophilus in complex with xylohexaose
Descriptor: CHLORIDE ION, Endo-1,4-beta-xylanase, SULFATE ION, ...
Authors:Dann, R.D, Solomon, H.V, Lansky, S, Ben-David, A, Lavid, N, Salama, R, Shoham, Y, Shoham, G.
Deposit date:2014-03-06
Release date:2015-03-11
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Xylanase T6 (XT6) from Geobacillus Stearothermophilus in complex with xylohexaose
To be Published
3CU9
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BU of 3cu9 by Molmil
High resolution crystal structure of 1,5-alpha-L-arabinanase from Geobacillus Stearothermophilus
Descriptor: CALCIUM ION, GLYCEROL, Intracellular arabinanase
Authors:Alhassid, A, Ben David, A, Shoham, Y, Shoham, G.
Deposit date:2008-04-16
Release date:2009-04-21
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.06 Å)
Cite:Crystal structure of an inverting GH 43 1,5-alpha-L-arabinanase from Geobacillus stearothermophilus complexed with its substrate
Biochem.J., 422, 2009
3D61
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BU of 3d61 by Molmil
Crystal Structure Analysis of 1,5-alpha-arabinanase catalytic mutant (AbnBD147A) complexed to arabinobiose
Descriptor: CALCIUM ION, Intracellular arabinanase, alpha-L-arabinofuranose-(1-5)-beta-L-arabinofuranose
Authors:Alhassid, A, Ben David, A, Shoham, Y, Shoham, G.
Deposit date:2008-05-18
Release date:2009-04-21
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Crystal structure of an inverting GH 43 1,5-alpha-L-arabinanase from Geobacillus stearothermophilus complexed with its substrate
Biochem.J., 422, 2009
3D5Z
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Crystal Structure Analysis of 1,5-alpha-arabinanase catalytic mutant (AbnBE201A) complexed to arabinotriose
Descriptor: CALCIUM ION, Intracellular arabinanase, alpha-L-arabinofuranose-(1-5)-alpha-L-arabinofuranose-(1-5)-beta-L-arabinofuranose
Authors:Alhassid, A, Ben David, A, Shoham, Y, Shoham, G.
Deposit date:2008-05-18
Release date:2009-04-21
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structure of an inverting GH 43 1,5-alpha-L-arabinanase from Geobacillus stearothermophilus complexed with its substrate
Biochem.J., 422, 2009
7MH2
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BU of 7mh2 by Molmil
T4GALA Engineered Protein Nanocage
Descriptor: T4GALA Engineered Protein Nanocage
Authors:Andreas, M.P, Jones, J.A, Cristie-David, A.S, Giessen, T.W.
Deposit date:2021-04-14
Release date:2021-09-29
Last modified:2024-05-29
Method:ELECTRON MICROSCOPY (3.57 Å)
Cite:Triggered Reversible Disassembly of an Engineered Protein Nanocage*.
Angew.Chem.Int.Ed.Engl., 60, 2021
4PUD
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BU of 4pud by Molmil
Extracellulr Xylanase from Geobacillus stearothermophilus: E159Q mutant, with xylopentaose in active site
Descriptor: CHLORIDE ION, Endo-1,4-beta-xylanase, ZINC ION, ...
Authors:Dann, R.D, Solomon, H.V, Lansky, S, Ben-David, A, Lavid, N, Salama, R, Shoham, Y, Shoham, G.
Deposit date:2014-03-13
Release date:2015-03-18
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.01 Å)
Cite:Extracellulr Xylanase from Geobacillus stearothermophilus: E159Q mutant, with xylopentaose in active site.
To be Published
3D60
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BU of 3d60 by Molmil
Crystal Structure Analysis of 1,5-alpha-arabinanase catalytic mutant (D27A)
Descriptor: CALCIUM ION, Intracellular arabinanase
Authors:Alhassid, A, Ben David, A, Shoham, Y, Shoham, G.
Deposit date:2008-05-18
Release date:2009-04-21
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structure of an inverting GH 43 1,5-alpha-L-arabinanase from Geobacillus stearothermophilus complexed with its substrate
Biochem.J., 422, 2009
3D5Y
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BU of 3d5y by Molmil
High resolution crystal structure of 1,5-alpha-arabinanase catalytic mutant (AbnBE201A)
Descriptor: CALCIUM ION, Intracellular arabinanase
Authors:Alhassid, A, Ben David, A, Shoham, Y, Shoham, G.
Deposit date:2008-05-18
Release date:2009-04-21
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.22 Å)
Cite:Crystal structure of an inverting GH 43 1,5-alpha-L-arabinanase from Geobacillus stearothermophilus complexed with its substrate
Biochem.J., 422, 2009
8QYQ
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BU of 8qyq by Molmil
Beta-cardiac myosin S1 fragment in the pre-powerstroke state complexed to Mavacamten
Descriptor: 6-[[(1~{S})-1-phenylethyl]amino]-3-propan-2-yl-1~{H}-pyrimidine-2,4-dione, ADENOSINE-5'-DIPHOSPHATE, BERYLLIUM TRIFLUORIDE ION, ...
Authors:Robert-Paganin, J, Kikuti, C, Auguin, D, Rety, S, David, A, Houdusse, A.
Deposit date:2023-10-26
Release date:2023-12-13
Method:X-RAY DIFFRACTION (2.61 Å)
Cite:Omecamtiv mecarbil and Mavacamten target the same myosin pocket despite antagonistic effects in heart contraction.
Biorxiv, 2023
8QYP
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BU of 8qyp by Molmil
Beta-cardiac myosin motor domain in the pre-powerstroke state
Descriptor: ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, Myosin-7, ...
Authors:Robert-Paganin, J, Kikuti, C, Auguin, D, Rety, S, David, A, Houdusse, A.
Deposit date:2023-10-26
Release date:2023-12-13
Method:X-RAY DIFFRACTION (2.759 Å)
Cite:Omecamtiv mecarbil and Mavacamten target the same myosin pocket despite antagonistic effects in heart contraction.
Biorxiv, 2023
8QYU
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BU of 8qyu by Molmil
Beta-cardiac myosin S1 fragment in the pre-powerstroke state complexed to Omecamtiv mecarbil
Descriptor: ADENOSINE-5'-DIPHOSPHATE, DIMETHYL SULFOXIDE, FORMIC ACID, ...
Authors:Robert-Paganin, J, Kikuti, C, Auguin, D, Rety, S, David, A, Houdusse, A.
Deposit date:2023-10-26
Release date:2023-12-13
Method:X-RAY DIFFRACTION (1.96 Å)
Cite:Omecamtiv mecarbil and Mavacamten target the same myosin pocket despite antagonistic effects in heart contraction.
Biorxiv, 2023
8QYR
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BU of 8qyr by Molmil
Beta-cardiac myosin motor domain in the pre-powerstroke state complexed to Mavacamten
Descriptor: 1,2-ETHANEDIOL, 6-[[(1~{S})-1-phenylethyl]amino]-3-propan-2-yl-1~{H}-pyrimidine-2,4-dione, ADENOSINE-5'-DIPHOSPHATE, ...
Authors:Robert-Paganin, J, Kikuti, C, Auguin, D, Rety, S, David, A, Houdusse, A.
Deposit date:2023-10-26
Release date:2023-12-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Omecamtiv mecarbil and Mavacamten target the same myosin pocket despite antagonistic effects in heart contraction.
Biorxiv, 2023
2R6G
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BU of 2r6g by Molmil
The Crystal Structure of the E. coli Maltose Transporter
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, Maltose transport system permease protein malF, Maltose transport system permease protein malG, ...
Authors:Oldham, M.L, Khare, D, Quiocho, F.A, Davidson, A.L, Chen, J.
Deposit date:2007-09-05
Release date:2007-11-27
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Crystal structure of a catalytic intermediate of the maltose transporter.
Nature, 450, 2007
2RPN
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BU of 2rpn by Molmil
A crucial role for high intrinsic specificity in the function of yeast SH3 domains
Descriptor: Actin-binding protein, Actin-regulating kinase 1
Authors:Stollar, E.J, Garcia, B, Chong, A, Forman-Kay, J, Davidson, A.
Deposit date:2008-06-12
Release date:2009-06-16
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Structural, functional, and bioinformatic studies demonstrate the crucial role of an extended peptide binding site for the SH3 domain of yeast Abp1p
J.Biol.Chem., 284, 2009
5UZ9
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BU of 5uz9 by Molmil
Cryo EM structure of anti-CRISPRs, AcrF1 and AcrF2, bound to type I-F crRNA-guided CRISPR surveillance complex
Descriptor: Anti-CRISPR protein 30, Anti-CRISPR protein Acr30-35, CRISPR RNA (60-MER), ...
Authors:Chowdhury, S, Carter, J, Rollins, M.F, Jackson, R.N, Hoffmann, C, Nosaka, L, Bondy-Denomy, J, Maxwell, K.L, Davidson, A.R, Fischer, E.R, Lander, G.C, Wiedenheft, B.
Deposit date:2017-02-25
Release date:2017-04-26
Last modified:2024-03-13
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Structure Reveals Mechanisms of Viral Suppressors that Intercept a CRISPR RNA-Guided Surveillance Complex.
Cell, 169, 2017
1HYW
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BU of 1hyw by Molmil
SOLUTION STRUCTURE OF BACTERIOPHAGE LAMBDA GPW
Descriptor: HEAD-TO-TAIL JOINING PROTEIN W
Authors:Maxwell, K.L, Yee, A.A, Booth, V, Arrowsmith, C.H, Gold, M, Davidson, A.R.
Deposit date:2001-01-22
Release date:2001-04-25
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:The solution structure of bacteriophage lambda protein W, a small morphogenetic protein possessing a novel fold.
J.Mol.Biol., 308, 2001
6ARZ
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BU of 6arz by Molmil
Structure of a phage anti-CRISPR protein
Descriptor: BROMIDE ION, GLYCEROL, TETRAETHYLENE GLYCOL, ...
Authors:Calmettes, C, Shah, M, Pawluk, A, Davidson, A.R, Maxwell, K.L, Moraes, T.F.
Deposit date:2017-08-23
Release date:2018-08-29
Last modified:2019-03-20
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Disabling a Type I-E CRISPR-Cas Nuclease with a Bacteriophage-Encoded Anti-CRISPR Protein.
MBio, 8, 2017
6AS4
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BU of 6as4 by Molmil
Structure of a phage anti-CRISPR protein
Descriptor: NHis AcrE1 anti-crispr protein
Authors:Shah, M, Calmettes, C, Pawluk, A, Mejdani, M, Davidson, A.R, Maxwell, K.L, Moraes, T.F.
Deposit date:2017-08-23
Release date:2017-12-20
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2 Å)
Cite:Disabling a Type I-E CRISPR-Cas Nuclease with a Bacteriophage-Encoded Anti-CRISPR Protein.
MBio, 8, 2017
6AS3
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BU of 6as3 by Molmil
Structure of a phage anti-CRISPR protein
Descriptor: NHis AcrE1 protein
Authors:Shah, M, Calmettes, C, Pawluk, A, Mejdani, M, Davidson, A.R, Maxwell, K.L, Moraes, T.F.
Deposit date:2017-08-23
Release date:2018-08-29
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2 Å)
Cite:Disabling a Type I-E CRISPR-Cas Nuclease with a Bacteriophage-Encoded Anti-CRISPR Protein.
MBio, 8, 2017
7KIX
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BU of 7kix by Molmil
The structure of anti-CRISPR AcrIE2
Descriptor: Anti-CRISPR protein AcrIE2
Authors:Pawluk, A, Davidson, A.R, Maxwell, K.L.
Deposit date:2020-10-25
Release date:2021-05-26
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Anti-CRISPR AcrIE2 Binds the Type I-E CRISPR-Cas Complex But Does Not Block DNA Binding.
J.Mol.Biol., 433, 2021
4JBW
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Crystal structure of E. coli maltose transporter MalFGK2 in complex with its regulatory protein EIIAglc
Descriptor: (1R)-2-{[{[(2S)-2,3-DIHYDROXYPROPYL]OXY}(HYDROXY)PHOSPHORYL]OXY}-1-[(PALMITOYLOXY)METHYL]ETHYL (11E)-OCTADEC-11-ENOATE, Glucose-specific phosphotransferase enzyme IIA component, Maltose transport system permease protein MalF, ...
Authors:Chen, S, Oldham, M.L, Davidson, A.L, Chen, J.
Deposit date:2013-02-20
Release date:2013-06-12
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (3.913 Å)
Cite:Carbon catabolite repression of the maltose transporter revealed by X-ray crystallography.
Nature, 499, 2013

 

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