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PDB: 85 件

3RII
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BU of 3rii by Molmil
Crystal structure of the catalytic domain of UCHL5, a proteasome-associated human deubiquitinating enzyme, reveals an unproductive form of the enzyme
分子名称: 1,2-ETHANEDIOL, MAGNESIUM ION, Ubiquitin carboxyl-terminal hydrolase isozyme L5
著者Das, C.
登録日2011-04-13
公開日2011-11-09
最終更新日2011-12-14
実験手法X-RAY DIFFRACTION (2.0008 Å)
主引用文献Crystal structure of the catalytic domain of UCHL5, a proteasome-associated human deubiquitinating enzyme, reveals an unproductive form of the enzyme.
Febs J., 278, 2011
3RIS
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BU of 3ris by Molmil
Crystal structure of the catalytic domain of UCHL5, a proteasome-associated human deubiquitinating enzyme, reveals an unproductive form of the enzyme
分子名称: GLYCEROL, SULFATE ION, Ubiquitin carboxyl-terminal hydrolase isozyme L5
著者Das, C, Permaul, M, Maiti, T.K.
登録日2011-04-14
公開日2011-11-09
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.398 Å)
主引用文献Crystal structure of the catalytic domain of UCHL5, a proteasome-associated human deubiquitinating enzyme, reveals an unproductive form of the enzyme.
Febs J., 278, 2011
3IFW
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BU of 3ifw by Molmil
Crystal structure of the S18Y variant of ubiquitin carboxy terminal hydrolase L1 bound to ubiquitin vinylmethylester.
分子名称: METHYL 4-AMINOBUTANOATE, Ubiquitin, Ubiquitin carboxyl-terminal hydrolase isozyme L1
著者Das, C, Boudreaux, D, Maiti, T.
登録日2009-07-26
公開日2010-06-16
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Ubiquitin vinyl methyl ester binding orients the misaligned active site of the ubiquitin hydrolase UCHL1 into productive conformation.
Proc.Natl.Acad.Sci.USA, 107, 2010
4IG7
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BU of 4ig7 by Molmil
Crystal structure of Trichinella spiralis UCH37 bound to Ubiquitin vinyl methyl ester
分子名称: METHYL 4-AMINOBUTANOATE, Ubiquitin, Ubiquitin C-terminal hydrolase 37
著者Das, C, Kim, M.I, Morrow, M.E.
登録日2012-12-16
公開日2013-05-29
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.996 Å)
主引用文献Stabilization of an Unusual Salt Bridge in Ubiquitin by the Extra C‑Terminal Domain of the Proteasome-Associated Deubiquitinase UCH37 as a Mechanism of Its Exo Specificity.
Biochemistry, 52, 2013
2ETL
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BU of 2etl by Molmil
Crystal Structure of Ubiquitin Carboxy-terminal Hydrolase L1 (UCH-L1)
分子名称: CHLORIDE ION, Ubiquitin carboxyl-terminal hydrolase isozyme L1
著者Das, C, Hoang, Q.Q, Kreinbring, C.A, Luchansky, S.J, Meray, R.K, Ray, S.S, Lansbury, P.T, Ringe, D, Petsko, G.A.
登録日2005-10-27
公開日2006-03-28
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Structural basis for conformational plasticity of the Parkinson's disease-associated ubiquitin hydrolase UCH-L1.
Proc.Natl.Acad.Sci.USA, 103, 2006
1DE7
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BU of 1de7 by Molmil
INTERACTION OF FACTOR XIII ACTIVATION PEPTIDE WITH ALPHA-THROMBIN: CRYSTAL STRUCTURE OF THE ENZYME-SUBSTRATE COMPLEX
分子名称: ALPHA-THROMBIN (HEAVY CHAIN), ALPHA-THROMBIN (LIGHT CHAIN), FACTOR XIII ACTIVATION PEPTIDE (28-37), ...
著者Sadasivan, C, Yee, V.C.
登録日1999-11-13
公開日2000-12-13
最終更新日2023-08-09
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Interaction of the factor XIII activation peptide with alpha -thrombin. Crystal structure of its enzyme-substrate analog complex.
J.Biol.Chem., 275, 2000
6MEP
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BU of 6mep by Molmil
Crystal structure of the catalytic domain of the proto-oncogene tyrosine-protein kinase MER in complex with inhibitor UNC3437
分子名称: CHLORIDE ION, MAGNESIUM ION, Tyrosine-protein kinase Mer, ...
著者Da, C, Zhang, D, Stashko, M.A, Cheng, A, Hunter, D, Norris-Drouin, J, Graves, L, Machius, M, Miley, M.J, DeRyckere, D, Earp, H.S, Graham, D.K, Frye, S.V, Wang, X, Kireev, D.
登録日2018-09-06
公開日2019-09-11
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.893 Å)
主引用文献Data-Driven Construction of Antitumor Agents with Controlled Polypharmacology.
J.Am.Chem.Soc., 141, 2019
180D
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BU of 180d by Molmil
SEQUENCE-DEPENDENT MICROHETEROGENEITY OF Z-DNA: THE CRYSTAL AND MOLECULAR STRUCTURES OF D(CACGCG).D(CGCGTG) AND D(CGCACG).D(CGTGCG)
分子名称: DNA (5'-D(*CP*GP*CP*AP*CP*G)-3'), DNA (5'-D(*CP*GP*TP*GP*CP*G)-3')
著者Sadasivan, C, Gautham, N.
登録日1994-07-19
公開日1995-07-19
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Sequence-dependent microheterogeneity of Z-DNA: the crystal and molecular structures of d(CACGCG).d(CGCGTG) and d(CGCACG).d(CGTGCG).
J.Mol.Biol., 248, 1995
181D
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BU of 181d by Molmil
SEQUENCE-DEPENDENT MICROHETEROGENEITY OF Z-DNA: THE CRYSTAL AND MOLECULAR STRUCTURES OF D(CACGCG).D(CGCGTG) AND D(CGCACG).D(CGTGCG)
分子名称: DNA (5'-D(*CP*AP*CP*GP*CP*G)-3'), DNA (5'-D(*CP*GP*CP*GP*TP*G)-3')
著者Sadasivan, C, Gautham, N.
登録日1994-07-22
公開日1995-07-19
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Sequence-dependent microheterogeneity of Z-DNA: the crystal and molecular structures of d(CACGCG).d(CGCGTG) and d(CGCACG).d(CGTGCG).
J.Mol.Biol., 248, 1995
1XPT
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BU of 1xpt by Molmil
BOVINE RIBONUCLEASE A (PHOSPHATE-FREE)
分子名称: RIBONUCLEASE A
著者Sadasivan, C, Nagendra, H.G, Vijayan, M.
登録日1998-02-23
公開日1998-05-27
最終更新日2024-06-05
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Plasticity, hydration and accessibility in ribonuclease A. The structure of a new crystal form and its low-humidity variant.
Acta Crystallogr.,Sect.D, 54, 1998
1XPS
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BU of 1xps by Molmil
BOVINE RIBONUCLEASE A (PHOSPHATE-FREE) (93 % HUMIDITY)
分子名称: RIBONUCLEASE A
著者Sadasivan, C, Nagendra, H.G, Vijayan, M.
登録日1998-02-23
公開日1998-05-27
最終更新日2024-06-05
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Plasticity, hydration and accessibility in ribonuclease A. The structure of a new crystal form and its low-humidity variant.
Acta Crystallogr.,Sect.D, 54, 1998
6P5H
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BU of 6p5h by Molmil
Structure of MavC middle insertion domain
分子名称: MavC
著者Negron Teron, K.I, Puvar, K, Iyer, S, Das, C.
登録日2019-05-30
公開日2020-05-27
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.53 Å)
主引用文献Legionella effector MavC targets the Ube2N~Ub conjugate for noncanonical ubiquitination.
Nat Commun, 11, 2020
6P5B
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BU of 6p5b by Molmil
Crystal Structure of MavC in Complex with Ub-UbE2N
分子名称: MavC, Ubiquitin, Ubiquitin-conjugating enzyme E2 N
著者Puvar, K, Iyer, S, Negron Teron, K.I, Das, C.
登録日2019-05-30
公開日2020-05-27
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.099 Å)
主引用文献Legionella effector MavC targets the Ube2N~Ub conjugate for noncanonical ubiquitination.
Nat Commun, 11, 2020
6MRN
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BU of 6mrn by Molmil
Crystal Structure of ChlaDUB2 DUB domain
分子名称: Deubiquitinase and deneddylase Dub2
著者Hausman, J.M, Das, C.
登録日2018-10-15
公開日2019-10-30
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.29 Å)
主引用文献The Two Deubiquitinating Enzymes fromChlamydia trachomatisHave Distinct Ubiquitin Recognition Properties.
Biochemistry, 59, 2020
6OAM
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BU of 6oam by Molmil
Crystal Structure of ChlaDUB2 DUB domain
分子名称: Deubiquitinase and deneddylase Dub2, Ubiquitin
著者Hausman, J.M, Das, C.
登録日2019-03-17
公開日2020-04-22
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.503 Å)
主引用文献The Two Deubiquitinating Enzymes fromChlamydia trachomatisHave Distinct Ubiquitin Recognition Properties.
Biochemistry, 59, 2020
6OV1
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BU of 6ov1 by Molmil
Structure of Staphylococcus aureus RNase P protein mutant with defective mRNA degradation activity
分子名称: Ribonuclease P protein component
著者Ha, L, Colquhoun, J, Noinaj, N, Das, C, Dunman, P, Flaherty, D.P.
登録日2019-05-06
公開日2020-12-02
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.66 Å)
主引用文献Genetic and biochemical characterization of Staphylococcus aureus RnpA
To Be Published
7LM3
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BU of 7lm3 by Molmil
Crystal Structure of Thr316Ala mutant of JAMM domain of S. pombe
分子名称: AMSH-like protease sst2, PHOSPHATE ION, ZINC ION
著者Shrestha, R, Das, C.
登録日2021-02-05
公開日2021-06-30
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Crystal structure of the Thr316Ala mutant of a yeast JAMM deubiquitinase: implication of active-site loop dynamics in catalysis.
Acta Crystallogr.,Sect.F, 77, 2021
8FEK
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BU of 8fek by Molmil
Crystal structure of PBP cyclase Ulm16
分子名称: PBP cyclase Ulm16
著者Patel, R, Budimir, Z, Parkinson, E, Das, C.
登録日2022-12-06
公開日2023-11-08
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (2.058 Å)
主引用文献Biocatalytic cyclization of small macrolactams by a penicillin-binding protein-type thioesterase.
Nat.Chem.Biol., 20, 2024
6WTG
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BU of 6wtg by Molmil
SdeA DUB Domain in complex with Ubiquitin
分子名称: Ubiquitin, Ubiquitinating/deubiquitinating enzyme SdeA
著者Kenny, S, Sheedlo, M, Das, C.
登録日2020-05-02
公開日2021-03-03
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.63 Å)
主引用文献Insights into Ubiquitin Product Release in Hydrolysis Catalyzed by the Bacterial Deubiquitinase SdeA.
Biochemistry, 60, 2021
6ULH
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BU of 6ulh by Molmil
Structure of MavC in complex with its substrate in R3 spacegroup
分子名称: LPG2147 (MavC), Ubiquitin, Ubiquitin-conjugating enzyme E2 N
著者Iyer, S, Puvar, K, Das, C.
登録日2019-10-08
公開日2020-05-27
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.968 Å)
主引用文献Legionella effector MavC targets the Ube2N~Ub conjugate for noncanonical ubiquitination.
Nat Commun, 11, 2020
6UMS
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BU of 6ums by Molmil
Crystal structure of MavC in complex with its substrate mimic in C222(1) space group
分子名称: MavC, Ubiquitin, Ubiquitin-conjugating enzyme E2 N
著者Iyer, S, Puvar, K, Das, C.
登録日2019-10-10
公開日2020-05-27
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.344 Å)
主引用文献Legionella effector MavC targets the Ube2N~Ub conjugate for noncanonical ubiquitination.
Nat Commun, 11, 2020
6UMP
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BU of 6ump by Molmil
Crystal structure of MavC in complex with substrate mimic in P65 space group
分子名称: MavC, Ubiquitin, Ubiquitin-conjugating enzyme E2 N
著者Puvar, K, Iyer, S, Luo, Z.Q, Das, C.
登録日2019-10-10
公開日2020-05-27
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Legionella effector MavC targets the Ube2N~Ub conjugate for noncanonical ubiquitination.
Nat Commun, 11, 2020
8UX2
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BU of 8ux2 by Molmil
Chromobacterium violaceum mono-ADP-ribosyltransferase CteC in complex with NAD+
分子名称: 1,2-ETHANEDIOL, CALCIUM ION, NAD(+)--protein-threonine ADP-ribosyltransferase, ...
著者Zhang, Z, Rondon, H, Das, C.
登録日2023-11-08
公開日2024-01-17
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.87 Å)
主引用文献Crystal structure of bacterial ubiquitin ADP-ribosyltransferase CteC reveals a substrate-recruiting insertion.
J.Biol.Chem., 300, 2023
8DMU
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BU of 8dmu by Molmil
Crystal structure of macrodomain CG3568 from Drosophila melanogaster in complex with ADP-ribose
分子名称: CG3568, CHLORIDE ION, NICKEL (II) ION, ...
著者Zhang, Z, Das, C.
登録日2022-07-08
公開日2023-07-12
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structure of ADP-ribose-bound Drosophila macrodomain CG3568
To Be Published
8DMR
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BU of 8dmr by Molmil
Legionella macrodomain effector MavL R370A in complex with ADP-ribose
分子名称: 1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER, MavL, ...
著者Zhang, Z, Das, C.
登録日2022-07-08
公開日2023-07-12
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.86 Å)
主引用文献Structure of ADP-ribose-bound Legionella pneumophila macrodomain effector MavL R370A
To Be Published

 

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