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PDB: 2005 results

7W6S
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CryoEM structure of human KChIP2-Kv4.3 complex
Descriptor: Isoform 2 of Potassium voltage-gated channel subfamily D member 3, Kv channel-interacting protein 2
Authors:Ma, D.M, Guo, J.T.
Deposit date:2021-12-02
Release date:2022-11-02
Last modified:2025-06-25
Method:ELECTRON MICROSCOPY (2.8 Å)
Cite:Structural basis for the gating modulation of Kv4.3 by auxiliary subunits.
Cell Res., 32, 2022
7W3Y
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CryoEM structure of human Kv4.3
Descriptor: Isoform 2 of Potassium voltage-gated channel subfamily D member 3
Authors:Ma, D.M, Guo, J.T.
Deposit date:2021-11-26
Release date:2022-11-02
Last modified:2025-07-02
Method:ELECTRON MICROSCOPY (3 Å)
Cite:Structural basis for the gating modulation of Kv4.3 by auxiliary subunits.
Cell Res., 32, 2022
7W6T
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CryoEM structure of human KChIP1-Kv4.3-DPP6 complex
Descriptor: Dipeptidyl aminopeptidase-like protein 6, Isoform 2 of Potassium voltage-gated channel subfamily D member 3, Kv channel-interacting protein 1
Authors:Ma, D.M, Guo, J.T.
Deposit date:2021-12-02
Release date:2022-11-02
Last modified:2025-07-02
Method:ELECTRON MICROSCOPY (3.85 Å)
Cite:Structural basis for the gating modulation of Kv4.3 by auxiliary subunits.
Cell Res., 32, 2022
7W6N
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CryoEM structure of human KChIP1-Kv4.3 complex
Descriptor: Isoform 2 of Potassium voltage-gated channel subfamily D member 3, Kv channel-interacting protein 1
Authors:Ma, D.M, Guo, J.T.
Deposit date:2021-12-02
Release date:2022-11-02
Last modified:2025-07-02
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Structural basis for the gating modulation of Kv4.3 by auxiliary subunits.
Cell Res., 32, 2022
8XTP
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Comamonas testosteroni KF-1 circularly permuted group II intron Post-2S state
Descriptor: MAGNESIUM ION, POTASSIUM ION, RNA (133-MER), ...
Authors:Wang, L, Xie, J.H, Zhang, C, Zou, J, Huang, Z.R, Shang, S.T, Chen, X.Y, Yang, Y, Liu, J, Dong, H.H, Huang, D.M, Su, Z.M.
Deposit date:2024-01-11
Release date:2025-02-12
Last modified:2025-06-25
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:Structural basis of circularly permuted group II intron self-splicing.
Nat.Struct.Mol.Biol., 32, 2025
8XTQ
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Comamonas testosteroni KF-1 circularly permuted group II intron 1S state
Descriptor: MAGNESIUM ION, POTASSIUM ION, RNA (808-MER)
Authors:Wang, L, Xie, J.H, Zhang, C, Zou, J, Huang, Z.R, Shang, S.T, Chen, X.Y, Yang, Y, Liu, J, Dong, H.H, Huang, D.M, Su, Z.M.
Deposit date:2024-01-11
Release date:2025-02-12
Last modified:2025-07-16
Method:ELECTRON MICROSCOPY (2.96 Å)
Cite:Structural basis of circularly permuted group II intron self-splicing.
Nat.Struct.Mol.Biol., 32, 2025
8XTS
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Comamonas testosteroni KF-1 circularly permuted group II intron Pre-1S state
Descriptor: MAGNESIUM ION, POTASSIUM ION, RNA (814-MER)
Authors:Wang, L, Xie, J.H, Zhang, C, Zou, J, Huang, Z.R, Shang, S.T, Chen, X.Y, Yang, Y, Liu, J, Dong, H.H, Huang, D.M, Su, Z.M.
Deposit date:2024-01-11
Release date:2025-02-12
Last modified:2025-06-25
Method:ELECTRON MICROSCOPY (2.54 Å)
Cite:Structural basis of circularly permuted group II intron self-splicing.
Nat.Struct.Mol.Biol., 32, 2025
8Y8M
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Crystal structure of a benzaldehyde lyase mutant M3 from Herbiconiux sp. SALV-R1
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, DI(HYDROXYETHYL)ETHER, MAGNESIUM ION, ...
Authors:Li, Y, Zhang, Y.F, Chen, Y.Y, Liu, W.D, Yao, P.Y, Wu, Q.Q, Zhu, D.M.
Deposit date:2024-02-06
Release date:2025-02-12
Method:X-RAY DIFFRACTION (1.98 Å)
Cite:Manipulating Activity and Chemoselectivity of a Benzaldehyde Lyase for Efficient Synthesis of alpha-Hydroxymethyl Ketones and One-Pot Enantio-Complementary Conversion to 1,2-Diols
Acs Catalysis, 14, 2024
8Y7S
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Crystal structure of a benzaldehyde lyase mutant M6 from Herbiconiux sp. SALV-R1
Descriptor: MAGNESIUM ION, THIAMINE DIPHOSPHATE, Thiamine pyrophosphate-binding protein
Authors:Li, Y, Zhang, Y.F, Chen, Y.Y, Liu, W.D, Yao, P.Y, Wu, Q.Q, Zhu, D.M.
Deposit date:2024-02-05
Release date:2025-02-12
Method:X-RAY DIFFRACTION (2.68 Å)
Cite:Manipulating Activity and Chemoselectivity of a Benzaldehyde Lyase for Efficient Synthesis of alpha-Hydroxymethyl Ketones and One-Pot Enantio-Complementary Conversion to 1,2-Diols
Acs Catalysis, 14, 2024
1KQM
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SCALLOP MYOSIN S1-AMPPNP IN THE ACTIN-DETACHED CONFORMATION
Descriptor: CALCIUM ION, MAGNESIUM ION, MYOSIN ESSENTIAL LIGHT CHAIN, ...
Authors:Himmel, D.M, Gourinath, S, Reshetnikova, L, Shen, Y, Szent-Gyorgyi, G, Cohen, C.
Deposit date:2002-01-07
Release date:2002-11-20
Last modified:2024-12-25
Method:X-RAY DIFFRACTION (3 Å)
Cite:Crystallographic findings on the internally uncoupled and near-rigor states of myosin: Further insights into the mechanics of the motor
Proc.Natl.Acad.Sci.USA, 99, 2002
1KK7
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SCALLOP MYOSIN IN THE NEAR RIGOR CONFORMATION
Descriptor: CALCIUM ION, MAGNESIUM ION, MYOSIN ESSENTIAL LIGHT CHAIN, ...
Authors:Himmel, D.M, Gourinath, S, Reshetnikova, L, Shen, Y, Szent-Gyorgyi, A.G, Cohen, C.
Deposit date:2001-12-06
Release date:2002-10-09
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Crystallographic findings on the internally uncoupled and near-rigor states of myosin: further insights into the mechanics of the motor.
Proc.Natl.Acad.Sci.USA, 99, 2002
2M85
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PHD Domain from Human SHPRH
Descriptor: E3 ubiquitin-protein ligase SHPRH, ZINC ION
Authors:Machado, L.E.S.F, Pustovalova, Y, Pozhidaeva, A, Almeida, F.C.L, Bezsonova, I, Korzhnev, D.M.
Deposit date:2013-05-07
Release date:2013-08-14
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:PHD domain from human SHPRH.
J.Biomol.Nmr, 56, 2013
1NPG
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BU of 1npg by Molmil
MYOGLOBIN (HORSE HEART) WILD-TYPE COMPLEXED WITH NITROSOETHANE
Descriptor: Myoglobin, NITROSOETHANE, PROTOPORPHYRIN IX CONTAINING FE, ...
Authors:Copeland, D.M, West, A.H, Richter-Addo, G.B.
Deposit date:2003-01-17
Release date:2003-11-11
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystal structures of ferrous horse heart myoglobin complexed with nitric oxide and nitrosoethane.
Proteins, 53, 2003
2LZK
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BU of 2lzk by Molmil
NMR solution structure of an N2-guanine DNA adduct derived from the potent tumorigen dibenzo[a,l]pyrene: Intercalation from the minor groove with ruptured Watson-Crick base pairing
Descriptor: (11S,12S,13S)-11,12,13,14-tetrahydronaphtho[1,2,3,4-pqr]tetraphene-11,12,13-triol, DNA (5'-D(*CP*CP*AP*TP*CP*GP*CP*TP*AP*CP*C)-3'), DNA (5'-D(*GP*GP*TP*AP*GP*CP*GP*AP*TP*GP*G)-3')
Authors:Tang, Y, Liu, Z, Ding, S, Lin, C.H, Cai, Y, Rodriguez, F.A, Sayer, J.M, Jerina, D.M, Amin, S, Broyde, S, Geacintov, N.E.
Deposit date:2012-10-04
Release date:2012-11-21
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Nuclear Magnetic Resonance Solution Structure of an N(2)-Guanine DNA Adduct Derived from the Potent Tumorigen Dibenzo[a,l]pyrene: Intercalation from the Minor Groove with Ruptured Watson-Crick Base Pairing.
Biochemistry, 51, 2012
1NR4
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BU of 1nr4 by Molmil
High resolution crystal structures of thymus and activation-regulated chemokine
Descriptor: SULFATE ION, Thymus and activation-regulated chemokine
Authors:Asojo, O.A, Boulegue, C, Hoover, D.M, Lu, W, Lubkowski, J.
Deposit date:2003-01-23
Release date:2003-08-05
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.72 Å)
Cite:Structures of thymus and activation-regulated chemokine (TARC).
Acta Crystallogr.,Sect.D, 59, 2003
1OD0
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BU of 1od0 by Molmil
Family 1 b-glucosidase from Thermotoga maritima
Descriptor: BETA-GLUCOSIDASE A
Authors:Gloster, T, Zechel, D.L, Boraston, A.B, Boraston, C.M, Macdonald, J.M, Tilbrook, D.M, Stick, R.V, Davies, G.J.
Deposit date:2003-02-12
Release date:2003-03-06
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.11 Å)
Cite:Iminosugar Glycosidase Inhibitors: Structural and Thermodynamic Dissection of the Binding of Isofagomine and 1-Deoxynojirimycin to Beta-Glucosidases
J.Am.Chem.Soc., 125, 2003
2M0B
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BU of 2m0b by Molmil
Homodimeric transmembrane domain of the human receptor tyrosine kinase ErbB1 (EGFR, HER1) in micelles
Descriptor: Epidermal growth factor receptor
Authors:Lesovoy, D.M, Bocharov, E.V, Pustovalova, Y.E, Bocharova, O.V, Arseniev, A.S.
Deposit date:2012-10-24
Release date:2013-10-30
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Alternative packing of EGFR transmembrane domain suggests that protein-lipid interactions underlie signal conduction across membrane.
Biochim. Biophys. Acta, 1858, 2016
2MJ4
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BU of 2mj4 by Molmil
Neurotoxin II from snake venom Naja Oxiana in solution
Descriptor: Short neurotoxin 1
Authors:Lesovoy, D.M, Nolde, S.B, Bocharov, E.V, Lyukmanova, E.N, Arseniev, A.S.
Deposit date:2013-12-26
Release date:2015-01-28
Last modified:2024-10-30
Method:SOLUTION NMR
Cite:An NMR-based approach for validation of protein side-chains dynamics in silico
To be Published
2MIH
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BU of 2mih by Molmil
Solution structure of the CLAVATA-like encoded peptide of Meloidogyne hapla - MhCLE6/7
Descriptor: CLAVATA-LIKE ENCODED PEPTIDE OF MELOIDOGYNE HAPLA - MHCLE6/7
Authors:Bobay, B.G, Digennaro, P.M, Bird, D.M.
Deposit date:2013-12-13
Release date:2014-12-24
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Inferring function of CLE peptides from high resolution tertiary structures
To be Published
2M1X
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BU of 2m1x by Molmil
TICAM-1 TIR domain structure
Descriptor: TIR domain-containing adapter molecule 1
Authors:Enokizono, Y, Kumeta, H, Funami, K, Horiuchi, M, Sarmiento, J, Yamashita, K, Standley, D.M, Matsumoto, M, Seya, T, Inagaki, F.
Deposit date:2012-12-07
Release date:2014-01-15
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Structures and interface mapping of the TIR domain-containing adaptor molecules involved in interferon signaling.
Proc.Natl.Acad.Sci.USA, 110, 2013
1LDJ
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BU of 1ldj by Molmil
Structure of the Cul1-Rbx1-Skp1-F boxSkp2 SCF Ubiquitin Ligase Complex
Descriptor: Cullin homolog 1, ZINC ION, ring-box protein 1
Authors:Zheng, N, Schulman, B.A, Song, L, Miller, J.J, Jeffrey, P.D, Wang, P, Chu, C, Koepp, D.M, Elledge, S.J, Pagano, M, Conaway, R.C, Conaway, J.W, Harper, J.W, Pavletich, N.P.
Deposit date:2002-04-08
Release date:2002-05-08
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (3 Å)
Cite:Structure of the Cul1-Rbx1-Skp1-F boxSkp2 SCF ubiquitin ligase complex.
Nature, 416, 2002
1LII
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BU of 1lii by Molmil
STRUCTURE OF T. GONDII ADENOSINE KINASE BOUND TO ADENOSINE 2 AND AMP-PCP
Descriptor: ADENOSINE, CHLORIDE ION, MAGNESIUM ION, ...
Authors:Schumacher, M.A, Scott, D.M, Mathews, I.I, Ealick, S.E, Roos, D.S, Ullman, B, Brennan, R.G.
Deposit date:2002-04-17
Release date:2002-05-15
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.73 Å)
Cite:Crystal structures of Toxoplasma gondii adenosine kinase reveal a novel catalytic mechanism and prodrug binding.
J.Mol.Biol., 298, 2000
1LKM
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BU of 1lkm by Molmil
Crystal structure of Desulfovibrio vulgaris rubrerythrin all-iron(III) form
Descriptor: FE (III) ION, Rubrerythrin all-iron(III) form
Authors:Jin, S, Kurtz Jr, D.M, Liu, Z.J, Rose, J, Wang, B.C.
Deposit date:2002-04-25
Release date:2002-09-18
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (1.69 Å)
Cite:X-ray Crystal Structures of Reduced Rubrerythrin and its Azide Adduct: A Structure-Based Mechanism for a Non-Heme DiIron Peroxidase
J.Am.Chem.Soc., 124, 2002
7V9E
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BU of 7v9e by Molmil
Crystal structure of a methyl transferase ribozyme
Descriptor: BARIUM ION, GUANINE, RNA (68-MER), ...
Authors:Deng, J, Lilley, D.M.J, Huang, L.
Deposit date:2021-08-25
Release date:2022-03-23
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structure and mechanism of a methyltransferase ribozyme.
Nat.Chem.Biol., 18, 2022
1LIK
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BU of 1lik by Molmil
STRUCTURE OF T. GONDII ADENOSINE KINASE BOUND TO ADENOSINE
Descriptor: ADENOSINE, CHLORIDE ION, SULFATE ION, ...
Authors:Schumacher, M.A, Scott, D.M, Mathews, I.I, Ealick, S.E, Roos, D.S, Ullman, B, Brennan, R.G.
Deposit date:2002-04-17
Release date:2002-05-15
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.55 Å)
Cite:Crystal structures of Toxoplasma gondii adenosine kinase reveal a novel catalytic mechanism and prodrug binding.
J.Mol.Biol., 298, 2000

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