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PDB: 2004 件

8B9U
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Structure of ClpC1 NTD from Mycobacterium tuberculosis
分子名称: (MLE)V(MAA)(E9M)G, ATP-dependent Clp protease ATP-binding subunit ClpC1, FORMIC ACID
著者Meinhart, A, Hoi, D.M, Clausen, T.
登録日2022-10-10
公開日2023-07-05
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献Clp-targeting BacPROTACs impair mycobacterial proteostasis and survival.
Cell, 186, 2023
6L4M
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Crystal structure of vicilin from Solanum lycopersicum (tomato)
分子名称: 2-HYDROXYBENZOIC ACID, Vicilin
著者Jain, A, Salunke, D.M.
登録日2019-10-18
公開日2019-12-04
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (3.302 Å)
主引用文献Comparative study of 7S globulin from Corylus avellana and Solanum lycopersicum revealed importance of salicylic acid and Cu-binding loop in modulating their function.
Biochem.Biophys.Res.Commun., 522, 2020
6L8B
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The ligand-free structure of human PPARgamma LBD
分子名称: Peroxisome proliferator-activated receptor gamma
著者Jang, D.M, Han, B.W.
登録日2019-11-05
公開日2020-09-16
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.102 Å)
主引用文献Cyclin-Dependent Kinase 5 Inhibitor Butyrolactone I Elicits a Partial Agonist Activity of Peroxisome Proliferator-Activated Receptor gamma.
Biomolecules, 10, 2020
8BIK
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Crystal structure of human AMPK heterotrimer in complex with allosteric activator C455
分子名称: (3~{R},3~{a}~{R},6~{R},6~{a}~{R})-6-[[6-chloranyl-5-[4-[4-[[dimethyl(oxidanyl)-$l^{4}-sulfanyl]amino]phenyl]phenyl]-3~{H}-imidazo[4,5-b]pyridin-2-yl]oxy]-2,3,3~{a},5,6,6~{a}-hexahydrofuro[3,2-b]furan-3-ol, 5'-AMP-activated protein kinase catalytic subunit alpha-2, 5'-AMP-activated protein kinase subunit beta-1, ...
著者Schimpl, M, Mather, K.M, Boland, M.L, Rivers, E.L, Srivastava, A, Hemsley, P, Robinson, J, Wan, P.T, Hansen, J, Read, J.A, Trevaskis, J.L, Smith, D.M.
登録日2022-11-02
公開日2024-05-15
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Direct beta 1/ beta 2 AMPK activation reduces liver steatosis but not fibrosis in a mouse model of non-alcoholic steatohepatitis
Biorxiv, 2024
8BV0
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Binary complex between the NB-ARC domain from the Tomato immune receptor NRC1 and the SPRY domain-containing effector SS15 from the potato cyst nematode
分子名称: ADENOSINE-5'-DIPHOSPHATE, NRC1, Truncated secreted SPRY domain-containing protein 15 (Fragment)
著者Contreras, M.P, Pai, H, Muniyandi, S, Toghani, A, Lawson, D.M, Tumtas, Y, Duggan, C, Yuen, E.L.H, Stevenson, C.E.M, Harant, A, Wu, C.H, Bozkurt, T.O, Kamoun, S, Derevnina, L.
登録日2022-12-01
公開日2022-12-21
最終更新日2024-06-19
実験手法X-RAY DIFFRACTION (4.5 Å)
主引用文献Resurrection of plant disease resistance proteins via helper NLR bioengineering.
Sci Adv, 9, 2023
8BN6
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Pseudomonas aeruginosa DNA gyrase B 24kDa ATPase subdomain complexed with EBL3021
分子名称: 2-[[3,4-bis(chloranyl)-5-methyl-1~{H}-pyrrol-2-yl]carbonylamino]-4-morpholin-4-yl-1,3-benzothiazole-6-carboxylic acid, CALCIUM ION, DNA gyrase subunit B
著者Durcik, M, Zega, A, Zidar, N, Ilas, J, Tomasic, T, Masic, L.P, Mundy, J.E.A, Stevenson, C.E.M, Burton, N, Lawson, D.M, Maxwell, A, Kikelj, D.
登録日2022-11-12
公開日2023-03-29
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献New Dual Inhibitors of Bacterial Topoisomerases with Broad-Spectrum Antibacterial Activity and In Vivo Efficacy against Vancomycin-Intermediate Staphylococcus aureus .
J.Med.Chem., 66, 2023
6M53
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Crystal structure of 2, 3-dihydroxybenzoic acid decarboxylase from Fusarium oxysporum
分子名称: 2,3-dihydroxybenzoate decarboxylase, GLYCEROL, ZINC ION
著者Song, M.K, Feng, J.H, Liu, W.D, Wu, Q.Q, Zhu, D.M.
登録日2020-03-09
公開日2020-07-15
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献2,3-Dihydroxybenzoic Acid Decarboxylase from Fusarium oxysporum: Crystal Structures and Substrate Recognition Mechanism.
Chembiochem, 21, 2020
2J46
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Water structure of T. Aquaticus Ffh NG Domain At 1.1A Resolution
分子名称: (4R)-2-METHYLPENTANE-2,4-DIOL, ACETATE ION, CHLORIDE ION, ...
著者Freymann, D.M, Ramirez, U.D.
登録日2006-08-24
公開日2006-11-30
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (1.14 Å)
主引用文献Analysis of Protein Hydration in Ultra-High Resolution Structures of the Srp Gtpase Ffh
Acta Crystallogr.,Sect.D, 62, 2006
2J45
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Water structure of T. Aquaticus Ffh NG Domain At 1.1A Resolution
分子名称: (4R)-2-METHYLPENTANE-2,4-DIOL, 1,2-ETHANEDIOL, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, ...
著者Freymann, D.M, Ramirez, U.D.
登録日2006-08-24
公開日2006-11-30
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (1.14 Å)
主引用文献Analysis of Protein Hydration in Ultra-High Resolution Structures of the Srp Gtpase Ffh
Acta Crystallogr.,Sect.D, 62, 2006
8CAF
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N8C_Fab3b in complex with NEDD8-CUL1(WHB)
分子名称: Cullin-1, Fab Heavy Chain, Fab Light Chain, ...
著者Duda, D.M, Yanishevski, D, Henneberg, L.T, Schulman, B.A.
登録日2023-01-24
公開日2023-09-13
最終更新日2024-11-13
実験手法X-RAY DIFFRACTION (2.66 Å)
主引用文献Activity-based profiling of cullin-RING E3 networks by conformation-specific probes.
Nat.Chem.Biol., 19, 2023
1COY
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CRYSTAL STRUCTURE OF CHOLESTEROL OXIDASE COMPLEXED WITH A STEROID SUBSTRATE. IMPLICATIONS FOR FAD DEPENDENT ALCOHOL OXIDASES
分子名称: 3-BETA-HYDROXY-5-ANDROSTEN-17-ONE, CHOLESTEROL OXIDASE, FLAVIN-ADENINE DINUCLEOTIDE
著者Li, J, Vrielink, A, Brick, P, Blow, D.M.
登録日1993-06-14
公開日1993-10-31
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Crystal structure of cholesterol oxidase complexed with a steroid substrate: implications for flavin adenine dinucleotide dependent alcohol oxidases.
Biochemistry, 32, 1993
2Y3P
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Crystal structure of N-terminal domain of GyrA with the antibiotic simocyclinone D8
分子名称: DNA GYRASE SUBUNIT A, MAGNESIUM ION, SIMOCYCLINONE D8
著者Edwards, M.J, Flatman, R.H, Mitchenall, L.A, Stevenson, C.E.M, Le, T.B.K, Clarke, T.A, McKay, A.R, Fiedler, H.-P, Buttner, M.J, Lawson, D.M, Maxwell, A.
登録日2010-12-22
公開日2010-12-29
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2.62 Å)
主引用文献A Crystal Structure of the Bifunctional Antibiotic Simocyclinone D8, Bound to DNA Gyrase.
Science, 326, 2009
1FT5
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CRYSTAL STRUCTURE OF THE OXIDIZED STATE OF CYTOCHROME C554 FROM NITROSOMONAS EUROPAEA
分子名称: CYTOCHROME C554, PHOSPHATE ION, PROTOPORPHYRIN IX CONTAINING FE
著者Iverson, T.M, Arciero, D.M, Hooper, A.B, Rees, D.C.
登録日2000-09-11
公開日2000-09-20
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献High-resolution structures of the oxidized and reduced states of cytochrome c554 from Nitrosomonas europaea.
J.Biol.Inorg.Chem., 6, 2001
3UQH
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Crystal structure of aba receptor pyl10 (apo)
分子名称: Abscisic acid receptor PYL10, SULFATE ION
著者Sun, D.M, Wang, H.P, Wu, M.H, Zang, J.Y, Tian, C.L.
登録日2011-11-20
公開日2011-12-14
最終更新日2024-11-06
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Crystal Structure of Aba Receptor Pyl10
To be Published
1FT6
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REDUCED STATE OF CYTOCHROME C554 FROM NITROSOMONAS EUROPAEA
分子名称: CYTOCHROME C554, DITHIONITE, HEME C, ...
著者Iverson, T.M, Arciero, D.M, Hooper, A.B, Rees, D.C.
登録日2000-09-11
公開日2000-09-20
最終更新日2024-10-30
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献High-resolution structures of the oxidized and reduced states of cytochrome c554 from Nitrosomonas europaea.
J.Biol.Inorg.Chem., 6, 2001
2WMC
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Crystal structure of eukaryotic initiation factor 4E from Pisum sativum
分子名称: 7-METHYL-GUANOSINE-5'-TRIPHOSPHATE, EUKARYOTIC TRANSLATION INITIATION FACTOR 4E
著者Ashby, J.A, Stevenson, C.E.M, Maule, A.J, Lawson, D.M.
登録日2009-06-30
公開日2010-09-01
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structure-Based Mutational Analysis of Eif4E in Relation to Sbm1 Resistance to Pea Seed-Borne Mosaic Virus in Pea.
Plos One, 6, 2011
4LDD
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Crystal Structure of Ebola virus VP40 Hexamer
分子名称: Matrix protein VP40
著者Bornholdt, Z.A, Ableson, D.M, Saphire, E.O.
登録日2013-06-24
公開日2013-08-21
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (3.498 Å)
主引用文献Structural Rearrangement of Ebola Virus VP40 Begets Multiple Functions in the Virus Life Cycle.
Cell(Cambridge,Mass.), 154, 2013
4LDM
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Crystal Structure of an RNA-free VP40 Octameric Ring
分子名称: Matrix protein VP40
著者Bornholdt, Z.A, Ableson, D.M, Saphire, E.O.
登録日2013-06-24
公開日2013-08-21
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Structural Rearrangement of Ebola Virus VP40 Begets Multiple Functions in the Virus Life Cycle.
Cell(Cambridge,Mass.), 154, 2013
2O58
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Horse heart met manganese myoglobin
分子名称: Myoglobin, PROTOPORPHYRIN IX CONTAINING MN, SULFATE ION
著者Richter-Addo, G.B, Zahran, Z.N, Chooback, L, Copeland, D.M, West, A.H.
登録日2006-12-05
公開日2007-10-16
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Crystal structures of manganese- and cobalt-substituted myoglobin in complex with NO and nitrite reveal unusual ligand conformations.
J.Inorg.Biochem., 102, 2008
2O5Q
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Manganese horse heart myoglobin, nitric oxide modified
分子名称: MANGANESE PROTOPORPHYRIN IX, Myoglobin, NITRIC OXIDE, ...
著者Richter-Addo, G.B, Zahran, Z.N, Chooback, L, Copeland, D.M, West, A.H.
登録日2006-12-06
公開日2007-10-16
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Crystal structures of manganese- and cobalt-substituted myoglobin in complex with NO and nitrite reveal unusual ligand conformations.
J.Inorg.Biochem., 102, 2008
2O5S
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Cobalt horse heart myoglobin, nitrite modified
分子名称: Myoglobin, NITRITE ION, PROTOPORPHYRIN IX CONTAINING CO, ...
著者Richter-Addo, G.B, Zahran, Z.N, Chooback, L, Copeland, D.M, West, A.H.
登録日2006-12-06
公開日2007-10-16
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Crystal structures of manganese- and cobalt-substituted myoglobin in complex with NO and nitrite reveal unusual ligand conformations.
J.Inorg.Biochem., 102, 2008
3S6Y
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Structure of reovirus attachment protein sigma1 in complex with alpha-2,6-sialyllactose
分子名称: N-acetyl-alpha-neuraminic acid, N-acetyl-alpha-neuraminic acid-(2-6)-beta-D-galactopyranose-(1-4)-beta-D-glucopyranose, Outer capsid protein sigma-1
著者Reiter, D.M, Dermody, T.S, Stehle, T.
登録日2011-05-26
公開日2011-11-23
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.79 Å)
主引用文献Crystal structure of reovirus attachment protein sigma1 in complex with sialylated oligosaccharides
Plos Pathog., 7, 2011
5U9Q
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Ocellatin-LB1
分子名称: Ocellatin-LB1
著者Gusmao, K.A.G, Santos, D.M, de Lima, M.E, Pilo-Veloso, D, Resende, J.M.
登録日2016-12-17
公開日2017-12-13
最終更新日2024-10-23
実験手法SOLUTION NMR
主引用文献NMR structures in different membrane environments of three ocellatin peptides isolated from Leptodactylus labyrinthicus.
Peptides, 103, 2018
4LDI
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Low resolution structure of Ebola virus M241R mutant
分子名称: Matrix protein VP40
著者Bornholdt, Z.A, Ableson, D.M, Saphire, E.O.
登録日2013-06-24
公開日2013-08-21
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (4.15 Å)
主引用文献Structural Rearrangement of Ebola Virus VP40 Begets Multiple Functions in the Virus Life Cycle.
Cell(Cambridge,Mass.), 154, 2013
5D9S
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Structure of HLA-A2:01 with the 11-mer peptide F11V
分子名称: 11-mer peptide F11V, Beta-2-microglobulin, GLYCEROL, ...
著者Remesh, S.G, Zajonc, D.M.
登録日2015-08-19
公開日2016-07-06
最終更新日2024-10-09
実験手法X-RAY DIFFRACTION (1.87 Å)
主引用文献Toxoplasma gondii peptide ligands open the gate of the HLA class I binding groove.
Elife, 5, 2016

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