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PDB: 2004 results

1RJO
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AGAO + Xe
Descriptor: COPPER (II) ION, GLYCEROL, Phenylethylamine oxidase, ...
Authors:Guss, J.M, Trambaiolo, D.M, Duff, A.P.
Deposit date:2003-11-19
Release date:2004-12-07
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.67 Å)
Cite:Using Xenon as a Probe for Dioxygen-binding Sites in Copper Amine Oxidases
J.Mol.Biol., 344, 2004
1NG1
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N AND GTPASE DOMAINS OF THE SIGNAL SEQUENCE RECOGNITION PROTEIN FFH FROM THERMUS AQUATICUS
Descriptor: 1,2-ETHANEDIOL, ACETIC ACID, CADMIUM ION, ...
Authors:Freymann, D.M, Stroud, R.M, Walter, P.
Deposit date:1998-04-30
Release date:1999-07-30
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (2.03 Å)
Cite:Functional changes in the structure of the SRP GTPase on binding GDP and Mg2+GDP.
Nat.Struct.Biol., 6, 1999
2O5B
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Manganese horse heart myoglobin, reduced
Descriptor: MANGANESE PROTOPORPHYRIN IX, Myoglobin, SULFATE ION
Authors:Richter-Addo, G.B, Zahran, Z.N, Chooback, L, Copeland, D.M, West, A.H.
Deposit date:2006-12-05
Release date:2007-10-16
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structures of manganese- and cobalt-substituted myoglobin in complex with NO and nitrite reveal unusual ligand conformations.
J.Inorg.Biochem., 102, 2008
2O5L
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Manganese horse heart myoglobin, methanol modified
Descriptor: METHANOL, Myoglobin, PROTOPORPHYRIN IX CONTAINING MN, ...
Authors:Richter-Addo, G.B, Zahran, Z.N, Chooback, L, Copeland, D.M, West, A.H.
Deposit date:2006-12-06
Release date:2007-10-16
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystal structures of manganese- and cobalt-substituted myoglobin in complex with NO and nitrite reveal unusual ligand conformations.
J.Inorg.Biochem., 102, 2008
2O5O
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Manganese horse heart myoglobin, nitrite modified
Descriptor: Myoglobin, NITRITE ION, PROTOPORPHYRIN IX CONTAINING MN, ...
Authors:Richter-Addo, G.B, Zahran, Z.N, Chooback, L, Copeland, D.M, West, A.H.
Deposit date:2006-12-06
Release date:2007-10-16
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Crystal structures of manganese- and cobalt-substituted myoglobin in complex with NO and nitrite reveal unusual ligand conformations.
J.Inorg.Biochem., 102, 2008
2O5T
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Cobalt horse heart myoglobin, oxidized
Descriptor: Myoglobin, PROTOPORPHYRIN IX CONTAINING CO, SULFATE ION
Authors:Richter-Addo, G.B, Zahran, Z.N, Chooback, L, Copeland, D.M, West, A.H.
Deposit date:2006-12-06
Release date:2007-10-16
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Crystal structures of manganese- and cobalt-substituted myoglobin in complex with NO and nitrite reveal unusual ligand conformations.
J.Inorg.Biochem., 102, 2008
1JOJ
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BU of 1joj by Molmil
CONCANAVALIN A-HEXAPEPTIDE COMPLEX
Descriptor: CALCIUM ION, Concanavalin-Br, HEXAPEPTIDE, ...
Authors:Jain, D, Kaur, K, Salunke, D.M.
Deposit date:2001-07-30
Release date:2001-12-19
Last modified:2024-11-20
Method:X-RAY DIFFRACTION (3 Å)
Cite:Enhanced binding of a rationally designed peptide ligand of concanavalin a arises from improved geometrical complementarity.
Biochemistry, 40, 2001
1JUI
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CONCANAVALIN A-CARBOHYDRATE MIMICKING 10-MER PEPTIDE COMPLEX
Descriptor: 10-mer Peptide, CALCIUM ION, Concanavalin-Br, ...
Authors:Jain, D, Kaur, K.J, Salunke, D.M.
Deposit date:2001-08-24
Release date:2002-08-24
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (2.75 Å)
Cite:Plasticity in protein-peptide recognition: crystal structures of two different peptides bound to concanavalin A.
Biophys.J., 80, 2001
2C0F
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Structure of Wind Y53F mutant
Descriptor: WINDBEUTEL PROTEIN
Authors:Sevvana, M, Ma, Q, Barnewitz, K, Guo, C, Soling, H.-D, Ferrari, D.M, Sheldrick, G.M.
Deposit date:2005-09-02
Release date:2006-08-29
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.28 Å)
Cite:Structural Elucidation of the Pdi-Related Chaperone Wind with the Help of Mutants.
Acta Crystallogr.,Sect.D, 62, 2006
2Q3I
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Crystal structure of the D10-P3/IQN17 complex: a D-peptide inhibitor of HIV-1 entry bound to the GP41 coiled-coil pocket
Descriptor: CHLORIDE ION, D-peptide, Fusion protein between the Coiled-Coil pocket of HIV GP41 and gcn4-PIQI
Authors:Malashkevich, V.N, Eckert, D.M, Hong, L.H, Carr, P.A, Kim, P.S.
Deposit date:2007-05-30
Release date:2007-06-12
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Inhibiting HIV Entry: Discovery of D-Peptide Inhibitors that Target the Gp41 Coiled-Coil Pocket
Cell(Cambridge,Mass.), 99, 1999
1ODC
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STRUCTURE OF ACETYLCHOLINESTERASE (E.C. 3.1.1.7) COMPLEXED WITH N-4'-QUINOLYL-N'-9"-(1",2",3",4"-TETRAHYDROACRIDINYL)-1,8- DIAMINOOCTANE AT 2.2A RESOLUTION
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, ACETYLCHOLINESTERASE, N-QUINOLIN-4-YL-N'-(1,2,3,4-TETRAHYDROACRIDIN-9-YL)OCTANE-1,8-DIAMINE
Authors:Wong, D.M, Greenblatt, H.M, Carlier, P.R, Han, Y.-F, Pang, Y.-P, Silman, I, Sussman, J.L.
Deposit date:2003-02-15
Release date:2005-03-23
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Complexes of Alkylene-Linked Tacrine Dimers with Torpedo Californica Acetylcholinesterase: Binding of Bis(5)-Tacrine Produces a Dramatic Rearrangement in the Active-Site Gorge.
J.Med.Chem., 49, 2006
2O5M
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Manganese horse heart myoglobin, azide modified
Descriptor: AZIDE ION, Myoglobin, PROTOPORPHYRIN IX CONTAINING MN, ...
Authors:Richter-Addo, G.B, Zahran, Z.N, Chooback, L, Copeland, D.M, West, A.H.
Deposit date:2006-12-06
Release date:2007-10-16
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Crystal structures of manganese- and cobalt-substituted myoglobin in complex with NO and nitrite reveal unusual ligand conformations.
J.Inorg.Biochem., 102, 2008
2C0G
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BU of 2c0g by Molmil
Structure of PDI-related Chaperone, Wind mutant-Y53S
Descriptor: CHLORIDE ION, SODIUM ION, WINDBEUTEL PROTEIN
Authors:Sevvana, M, Ma, Q, Barnewitz, K, Guo, C, Soling, H.-D, Ferrari, D.M, Sheldrick, G.M.
Deposit date:2005-09-02
Release date:2006-08-29
Last modified:2024-11-20
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Structural Elucidation of the Pdi-Related Chaperone Wind with the Help of Mutants.
Acta Crystallogr.,Sect.D, 62, 2006
2C1Y
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Structure of PDI-related Chaperone, Wind mutant-Y55K
Descriptor: WINDBEUTEL PROTEIN
Authors:Sevvana, M, Ma, Q, Barnewitz, K, Guo, C, Soling, H.-D, Ferrari, D.M, Sheldrick, G.M.
Deposit date:2005-09-22
Release date:2006-08-29
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Structural Elucidation of the Pdi-Related Chaperone Wind with the Help of Mutants.
Acta Crystallogr.,Sect.D, 62, 2006
2C0E
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BU of 2c0e by Molmil
Structure of PDI-related Chaperone, Wind with his-tag on C-terminus.
Descriptor: WINDBEUTEL PROTEIN
Authors:Sevvana, M, Ma, Q, Barnewitz, K, Guo, C, Soling, H.-D, Ferrari, D.M, Sheldrick, G.M.
Deposit date:2005-09-01
Release date:2006-08-29
Last modified:2024-11-20
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Structural Elucidation of the Pdi-Related Chaperone Wind with the Help of Mutants.
Acta Crystallogr.,Sect.D, 62, 2006
5XIA
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BU of 5xia by Molmil
STRUCTURES OF D-XYLOSE ISOMERASE FROM ARTHROBACTER STRAIN B3728 CONTAINING THE INHIBITORS XYLITOL AND D-SORBITOL AT 2.5 ANGSTROMS AND 2.3 ANGSTROMS RESOLUTION, RESPECTIVELY
Descriptor: D-XYLOSE ISOMERASE, MAGNESIUM ION, Xylitol
Authors:Henrick, K, Collyer, C.A, Blow, D.M.
Deposit date:1989-07-05
Release date:1990-04-15
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structures of D-xylose isomerase from Arthrobacter strain B3728 containing the inhibitors xylitol and D-sorbitol at 2.5 A and 2.3 A resolution, respectively.
J.Mol.Biol., 208, 1989
2FFH
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BU of 2ffh by Molmil
THE SIGNAL SEQUENCE BINDING PROTEIN FFH FROM THERMUS AQUATICUS
Descriptor: CADMIUM ION, PROTEIN (FFH), SULFATE ION
Authors:Keenan, R.J, Freymann, D.M, Walter, P, Stroud, R.M.
Deposit date:1999-06-29
Release date:1999-07-16
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Crystal structure of the signal sequence binding subunit of the signal recognition particle.
Cell(Cambridge,Mass.), 94, 1998
2Q7C
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BU of 2q7c by Molmil
Crystal structure of IQN17
Descriptor: CHLORIDE ION, fusion protein between yeast variant GCN4 and HIVgp41
Authors:Malashkevich, V.N, Eckert, D.M, Hong, L.H, Kim, P.S.
Deposit date:2007-06-06
Release date:2007-06-19
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2 Å)
Cite:Inhibiting HIV Entry: Discovery of D-Peptide Inhibitors that Target the Gp41 Coiled-Coil Pocket
Cell(Cambridge,Mass.), 99, 1999
2RH1
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High resolution crystal structure of human B2-adrenergic G protein-coupled receptor.
Descriptor: (2S)-1-(9H-Carbazol-4-yloxy)-3-(isopropylamino)propan-2-ol, 1,4-BUTANEDIOL, ACETAMIDE, ...
Authors:Cherezov, V, Rosenbaum, D.M, Hanson, M.A, Rasmussen, S.G.F, Thian, F.S, Kobilka, T.S, Choi, H.J, Kuhn, P, Weis, W.I, Kobilka, B.K, Stevens, R.C, Accelerated Technologies Center for Gene to 3D Structure (ATCG3D), GPCR Network (GPCR)
Deposit date:2007-10-05
Release date:2007-10-30
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:High-resolution crystal structure of an engineered human beta2-adrenergic G protein-coupled receptor.
Science, 318, 2007
1KRH
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BU of 1krh by Molmil
X-ray Structure of Benzoate Dioxygenase Reductase
Descriptor: Benzoate 1,2-Dioxygenase Reductase, FE2/S2 (INORGANIC) CLUSTER, FLAVIN-ADENINE DINUCLEOTIDE, ...
Authors:Karlsson, A, Beharry, Z.M, Eby, D.M, Coulter, E.D, Niedle, E.L, Kurtz Jr, D.M, Eklund, H, Ramaswamy, S.
Deposit date:2002-01-09
Release date:2002-05-15
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:X-ray crystal structure of benzoate 1,2-dioxygenase reductase from Acinetobacter sp. strain ADP1.
J.Mol.Biol., 318, 2002
2HLD
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BU of 2hld by Molmil
Crystal structure of yeast mitochondrial F1-ATPase
Descriptor: ATP synthase alpha chain, mitochondrial, ATP synthase beta chain, ...
Authors:Kabaleeswaran, V, Puri, N, Walker, J.E, Leslie, A.G, Mueller, D.M.
Deposit date:2006-07-06
Release date:2006-11-28
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Novel features of the rotary catalytic mechanism revealed in the structure of yeast F(1) ATPase.
Embo J., 25, 2006
6L4C
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BU of 6l4c by Molmil
Crystal structure of vicilin from Corylus avellana (Hazelnut)
Descriptor: 48-kDa glycoprotein, COPPER (II) ION
Authors:Shikhi, M, Salunke, D.M.
Deposit date:2019-10-16
Release date:2019-12-04
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (3.191 Å)
Cite:Comparative study of 7S globulin from Corylus avellana and Solanum lycopersicum revealed importance of salicylic acid and Cu-binding loop in modulating their function.
Biochem.Biophys.Res.Commun., 522, 2020
6L89
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Human PPARgamma ligand binding domain complexed with Butyrolactone 1
Descriptor: Peroxisome proliferator-activated receptor gamma, methyl (2R)-3-(4-hydroxyphenyl)-2-[[3-(3-methylbut-2-enyl)-4-oxidanyl-phenyl]methyl]-4-oxidanyl-5-oxidanylidene-furan-2-carboxylate
Authors:Jang, D.M, Han, B.W.
Deposit date:2019-11-05
Release date:2020-09-16
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Cyclin-Dependent Kinase 5 Inhibitor Butyrolactone I Elicits a Partial Agonist Activity of Peroxisome Proliferator-Activated Receptor gamma.
Biomolecules, 10, 2020
6L7N
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crystal structure of a FUNGAL LIPASES
Descriptor: Lipase, class 3
Authors:Wang, Y.H, Yuan, H, Lan, D.M, Liu, X.H.
Deposit date:2019-11-01
Release date:2020-11-04
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:crystal structure of a FUNGAL LIPASES
To Be Published
8B9O
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Structure of the C-terminal domain of ClpC2 from Mycobacterium smegmatis
Descriptor: Clp amino terminal domain protein, phospho-arginine
Authors:Meinhart, A, Hoi, D.M, Clausen, T.
Deposit date:2022-10-06
Release date:2023-07-05
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2 Å)
Cite:Clp-targeting BacPROTACs impair mycobacterial proteostasis and survival.
Cell, 186, 2023

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