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PDB: 3016 results

2OGB
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Crystal structure of the C-terminal domain of mouse Nrdp1
Descriptor: GLYCEROL, RING finger protein 41, THIOCYANATE ION
Authors:Bouyain, S, Leahy, D.J.
Deposit date:2007-01-05
Release date:2007-01-16
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Structure-based mutagenesis of the substrate-recognition domain of Nrdp1/FLRF identifies the binding site for the receptor tyrosine kinase ErbB3.
Protein Sci., 16, 2007
2LEW
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BU of 2lew by Molmil
Structural Plasticity of Paneth cell alpha-Defensins: Characterization of Salt-Bridge Deficient Analogues of Mouse Cryptdin-4
Descriptor: Alpha-defensin 4
Authors:Rosengren, K, Andersson, H.S, Haugaard-Kedstrom, L.M, Bengtsson, E, Daly, N.L, Craik, D.J.
Deposit date:2011-06-24
Release date:2012-05-16
Last modified:2013-06-19
Method:SOLUTION NMR
Cite:The alpha-defensin salt-bridge induces backbone stability to facilitate folding and confer proteolytic resistance.
Amino Acids, 43, 2012
2L7M
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BU of 2l7m by Molmil
Solution Structure of the Pitx2 Homeodomain R24H mutant
Descriptor: Pituitary homeobox 2
Authors:Doerdelmann, T, Rance, M, Kojetin, D.J, Baird-Titus, J.M.
Deposit date:2010-12-14
Release date:2011-12-14
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Solution Structure of the Pitx2 Homeodomain R24H mutant
To be Published
2O0I
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crystal structure of the R185A mutant of the N-terminal domain of the Group B Streptococcus Alpha C protein
Descriptor: C protein alpha-antigen
Authors:Hogle, J.M, Filman, D.J, Baron, M.J, Madoff, L.C, Iglesias, A.
Deposit date:2006-11-27
Release date:2007-02-06
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Identification of a glycosaminoglycan binding region of the alpha C protein that mediates entry of group B streptococci into host cells.
J.Biol.Chem., 282, 2007
2M77
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BU of 2m77 by Molmil
[Asp2]RTD-1
Descriptor: [Asp2]RTD-1
Authors:Conibear, A.C, Bochen, A, Rosengren, K, Kessler, H, Craik, D.J.
Deposit date:2013-04-18
Release date:2014-02-05
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:The Cyclic Cystine Ladder of Theta-Defensins as a Stable, Bifunctional Scaffold: A Proof-of-Concept Study Using the Integrin-Binding RGD Motif
Chembiochem, 15, 2014
2MFA
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Mambalgin-2
Descriptor: Mambalgin-2
Authors:Schroeder, C.I, Rash, L.D, Vila-Farres, X, Rosengren, K.J, Mobli, M, King, G.F, Alewood, P.F, Craik, D.J, Durek, T.
Deposit date:2013-10-08
Release date:2014-01-01
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Chemical synthesis, 3D structure, and ASIC binding site of the toxin mambalgin-2.
Angew.Chem.Int.Ed.Engl., 53, 2014
2LYF
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BU of 2lyf by Molmil
High resolution NMR solution structure of the theta-defensin RTD-1
Descriptor: RTD-1
Authors:Conibear, A.C, Rosengren, K, Harvey, P.J, Craik, D.J.
Deposit date:2012-09-18
Release date:2012-11-28
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Structural characterization of the cyclic cystine ladder motif of theta-defensins.
Biochemistry, 51, 2012
2LYE
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High resolution NMR solution structure of a symmetrical theta-defensin, BTD-2
Descriptor: BTD-2
Authors:Conibear, A.C, Rosengren, K, Harvey, P.J, Craik, D.J.
Deposit date:2012-09-18
Release date:2012-11-28
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Structural characterization of the cyclic cystine ladder motif of theta-defensins.
Biochemistry, 51, 2012
2M98
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NMR Structure of BeF3 Activated Sma0114
Descriptor: BERYLLIUM TRIFLUORIDE ION, CALCIUM ION, Two-component response regulator
Authors:Sheftic, S.R, Gage, D.J, Alexandrescu, A.T.
Deposit date:2013-06-04
Release date:2014-01-29
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:NMR Structure of the HWE Kinase Associated Response Regulator Sma0114 in Its Activated State.
Biochemistry, 53, 2014
2M0O
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The solution structure of human PHF1 in complex with H3K36me3
Descriptor: H3K36me3 peptide, PHD finger protein 1
Authors:Song, J, Patel, D.J.
Deposit date:2012-10-30
Release date:2013-01-16
Last modified:2013-02-27
Method:SOLUTION NMR
Cite:An H3K36 Methylation-Engaging Tudor Motif of Polycomb-like Proteins Mediates PRC2 Complex Targeting.
Mol.Cell, 49, 2013
2LZI
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BU of 2lzi by Molmil
High resolution NMR structure of the theta-defensin HTD-2 (retrocyclin 2)
Descriptor: retrocyclin 2
Authors:Conibear, A.C, Rosengren, K, Harvey, P.J, Craik, D.J.
Deposit date:2012-10-02
Release date:2012-11-28
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Structural characterization of the cyclic cystine ladder motif of theta-defensins.
Biochemistry, 51, 2012
2LXQ
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BU of 2lxq by Molmil
Monomeric PilE G-Quadruplex DNA from Neisseria Gonorrhoeae
Descriptor: DNA (5'-D(*TP*AP*GP*GP*GP*TP*GP*GP*GP*TP*TP*GP*GP*GP*TP*GP*GP*GP*GP*AP*AP*T)-3')
Authors:Kuryavyi, V.V, Patel, D.J.
Deposit date:2012-08-30
Release date:2012-11-28
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:RecA-Binding pilE G4 Sequence Essential for Pilin Antigenic Variation Forms Monomeric and 5' End-Stacked Dimeric Parallel G-Quadruplexes.
Structure, 20, 2012
2LXV
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BU of 2lxv by Molmil
Dimeric pil-e g-quadruplex dna from neisseria gonorrhoeae, NMR 11 structures
Descriptor: 5'-D(*GP*GP*GP*TP*GP*GP*GP*TP*TP*GP*GP*GP*TP*GP*GP
Authors:Kuryavyi, V, Patel, D.J.
Deposit date:2012-08-31
Release date:2012-11-28
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:RecA-Binding pilE G4 Sequence Essential for Pilin Antigenic Variation Forms Monomeric and 5' End-Stacked Dimeric Parallel G-Quadruplexes.
Structure, 20, 2012
2MJ7
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BU of 2mj7 by Molmil
Solution NMR structure of beta-adaptin appendage domain of human adaptor protein complex 4 subunit beta, Northeast Structural Genomics Consortium (NESG) Target HR8998C
Descriptor: AP-4 complex subunit beta-1
Authors:Eletsky, A, Rotshteyn, D.J, Pederson, K, Shastry, R, Maglaqui, M, Janjua, H, Xiao, R, Everett, J.K, Montelione, G.T, Prestegard, J.H, Szyperski, T, Northeast Structural Genomics Consortium (NESG)
Deposit date:2013-12-26
Release date:2014-01-29
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Solution NMR structure of beta-adaptin appendage domain of human adaptor protein complex 4 subunit beta, Northeast Structural Genomics Consortium (NESG) Target HR8998C
To be Published
2M2H
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BU of 2m2h by Molmil
Solution structure of the antimicrobial peptide [Aba3,7,12,16]BTD-2
Descriptor: [Aba3,7,12,16]BTD-2
Authors:Conibear, A.C, Rosengren, K, Daly, N.L, Troiera Henriques, S, Craik, D.J.
Deposit date:2012-12-20
Release date:2013-02-27
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:The cyclic cystine ladder in theta-defensins is important for structure and stability, but not antibacterial activity.
J.Biol.Chem., 288, 2013
2MNA
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BU of 2mna by Molmil
The structural basis of DNA binding by the single-stranded DNA-binding protein from Sulfolobus solfataricus
Descriptor: Single-stranded DNA binding protein (SSB), ssDNA
Authors:Gamsjaeger, R, Kariawasam, R, Gimenez, A.X, Touma, C.F, McIlwain, E, Bernardo, R.E, Shepherd, N.E, Ataide, S.F, Dong, A.Q, Richard, D.J, White, M.F, Cubeddu, L.
Deposit date:2014-04-02
Release date:2014-12-17
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:The structural basis of DNA binding by the single-stranded DNA-binding protein from Sulfolobus solfataricus
Biochem.J., 465, 2015
2OE8
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BU of 2oe8 by Molmil
1.8 A X-ray crystal structure of Apramycin complex with RNA fragment GGGCGUCGCUAGUACC/CGGUACUAAAAGUCGCC containing the human ribosomal decoding A site: RNA construct with 5'-overhang
Descriptor: APRAMYCIN, RNA (5'-R(*CP*GP*GP*UP*AP*CP*UP*AP*AP*AP*AP*GP*UP*CP*GP*CP*C)-3'), RNA (5'-R(*GP*GP*GP*CP*GP*UP*CP*GP*CP*UP*AP*GP*UP*AP*CP*C)-3')
Authors:Hermann, T, Tereshko, V, Skripkin, E, Patel, D.J.
Deposit date:2006-12-28
Release date:2007-02-13
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Apramycin recognition by the human ribosomal decoding site.
Blood Cells Mol.Dis., 38, 2007
2KGI
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BU of 2kgi by Molmil
Solution structure of JARID1A C-terminal PHD finger in complex with H3(1-9)K4me3
Descriptor: H3(1-9)K4me3, Histone demethylase JARID1A, ZINC ION
Authors:Song, J, Wang, Z, Patel, D.J.
Deposit date:2009-03-12
Release date:2009-05-05
Last modified:2020-02-26
Method:SOLUTION NMR
Cite:Haematopoietic malignancies caused by dysregulation of a chromatin-binding PHD finger.
Nature, 459, 2009
2KF8
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BU of 2kf8 by Molmil
Structure of a two-G-tetrad basket-type intramolecular G-quadruplex formed by human telomeric repeats in K+ solution
Descriptor: HUMAN TELOMERE DNA
Authors:Lim, K.W, Amrane, S, Bouaziz, S, Xu, W, Mu, Y, Patel, D.J, Luu, K.N, Phan, A.T.
Deposit date:2009-02-12
Release date:2009-03-24
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Structure of the human telomere in K+ solution: a stable basket-type G-quadruplex with only two G-tetrad layers
J.Am.Chem.Soc., 131, 2009
2O3M
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BU of 2o3m by Molmil
Monomeric G-DNA tetraplex from human C-kit promoter
Descriptor: 5'-D(*AP*GP*GP*GP*AP*GP*GP*GP*CP*GP*CP*TP*GP*GP*GP*AP*GP*GP*AP*GP*GP*G)-3'
Authors:Phan, A.T, Kuryavyi, V.V, Burge, S, Neidle, S, Patel, D.J.
Deposit date:2006-12-01
Release date:2007-05-22
Last modified:2023-12-27
Method:SOLUTION NMR
Cite:Structure of an unprecedented G-quadruplex scaffold in the human c-kit promoter.
J.Am.Chem.Soc., 129, 2007
2NYA
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BU of 2nya by Molmil
Crystal structure of the periplasmic nitrate reductase (NAP) from Escherichia coli
Descriptor: 2-AMINO-5,6-DIMERCAPTO-7-METHYL-3,7,8A,9-TETRAHYDRO-8-OXA-1,3,9,10-TETRAAZA-ANTHRACEN-4-ONE GUANOSINE DINUCLEOTIDE, IRON/SULFUR CLUSTER, MOLYBDENUM(VI) ION, ...
Authors:Jepson, B.J.N, Richardson, D.J, Hemmings, A.M.
Deposit date:2006-11-20
Release date:2006-12-05
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Spectropotentiometric and structural analysis of the periplasmic nitrate reductase from Escherichia coli
J.Biol.Chem., 282, 2007
2NUI
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BU of 2nui by Molmil
X-ray Structure of synthetic [D83A]RNase A
Descriptor: 2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, CHLORIDE ION, Ribonuclease pancreatic
Authors:Boerema, D.J, Tereshko, V.A, Kent, S.B.H.
Deposit date:2006-11-09
Release date:2007-10-30
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.1 Å)
Cite:Total synthesis by modern chemical ligation methods and high resolution (1.1 A) X-ray structure of ribonuclease A
Biopolymers, 90, 2008
2OE5
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BU of 2oe5 by Molmil
1.5 A X-ray crystal structure of Apramycin complex with RNA fragment GGCGUCGCUAGUACCG/GGUACUAAAAGUCGCCC containing the human ribosomal decoding A site: RNA construct with 3'-overhang
Descriptor: APRAMYCIN, MAGNESIUM ION, RNA (5'-R(*GP*GP*CP*GP*UP*CP*GP*CP*UP*AP*GP*UP*AP*CP*CP*G)-3'), ...
Authors:Hermann, T, Tereshko, V, Skripkin, E, Patel, D.J.
Deposit date:2006-12-28
Release date:2007-02-13
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.51 Å)
Cite:Apramycin recognition by the human ribosomal decoding site.
Blood Cells Mol.Dis., 38, 2007
2M2Q
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BU of 2m2q by Molmil
Solution structure of MCh-1: A novel inhibitor cystine knot peptide from Momordica charantia
Descriptor: Inhibitor cystine knot peptide MCh-1
Authors:He, W, Chan, L, Clark, R.J, Tang, J, Zeng, G, Franco, O.L, Cantacessi, C, Craik, D.J, Daly, N.L, Tan, N.
Deposit date:2013-01-01
Release date:2013-11-06
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Novel Inhibitor Cystine Knot Peptides from Momordica charantia.
Plos One, 8, 2013
2MGO
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BU of 2mgo by Molmil
NMR solution structure of oxytocin
Descriptor: Oxytocin
Authors:Harvey, P.J, Craik, D.J.
Deposit date:2013-11-01
Release date:2014-10-22
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Oxytocic plant cyclotides as templates for peptide G protein-coupled receptor ligand design.
Proc.Natl.Acad.Sci.USA, 110, 2013

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