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PDB: 1201 件

3FWO
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The large ribosomal subunit from Deinococcus radiodurans complexed with Methymycin
分子名称: (3R,4S,5S,7R,9E,11S,12R)-12-ethyl-11-hydroxy-3,5,7,11-tetramethyl-2,8-dioxooxacyclododec-9-en-4-yl 3,4,6-trideoxy-3-(dimethylamino)-beta-D-xylo-hexopyranoside, 23S RIBOSOMAL RNA, 5S RIBOSOMAL RNA
著者Auerbach, T, Mermershtain, I, Bashan, A, Davidovich, C, Rozenberg, H, Sherman, D.H, Yonath, A.
登録日2009-01-19
公開日2010-01-19
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (3.71 Å)
主引用文献Structural basis for the antibacterial activity of the 12-membered-ring mono-sugar macrolide methymycin
Biotechnologia, 1, 2009
5U2O
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Crystal structure of Zn-binding triple mutant of GH family 9 endoglucanase J30
分子名称: CITRATE ANION, GLYCEROL, J30 CCH, ...
著者Ellinghaus, T.L, Pereira, J.H, McAndrew, R.P, Welner, D.H, Adams, P.D.
登録日2016-11-30
公開日2018-05-30
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.46 Å)
主引用文献Engineering glycoside hydrolase stability by the introduction of zinc binding.
Acta Crystallogr D Struct Biol, 74, 2018
4NNY
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Crystal structure of non-phosphorylated form of PKD2 phosphopeptide bound to HLA-A2
分子名称: Beta-2-microglobulin, CADMIUM ION, GLYCEROL, ...
著者Mohammed, F, Stones, D.H, Willcox, B.E.
登録日2013-11-19
公開日2014-11-19
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献The antigenic identity of human class I MHC phosphopeptides is critically dependent upon phosphorylation status.
Oncotarget, 8, 2017
2FWO
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MHC Class I H-2Kd heavy chain in complex with beta-2microglobulin and peptide derived from influenza nucleoprotein
分子名称: Beta-2-microglobulin, H-2 class I histocompatibility antigen, K-D alpha chain, ...
著者Mitaksov, V, Fremont, D.H.
登録日2006-02-02
公開日2006-02-21
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Structural Definition of the H-2Kd Peptide-binding Motif.
J.Biol.Chem., 281, 2006
4NO2
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Crystal structure of RQA_V phosphopeptide bound to HLA-A2
分子名称: 1,2-ETHANEDIOL, Beta-2-microglobulin, HLA class I histocompatibility antigen, ...
著者Mohammed, F, Stones, D.H, Willcox, B.E.
登録日2013-11-19
公開日2014-11-19
最終更新日2024-11-06
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献The antigenic identity of human class I MHC phosphopeptides is critically dependent upon phosphorylation status.
Oncotarget, 8, 2017
3I46
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Crystal structure of beta toxin from Staphylococcus aureus F277A, P278A mutant with bound calcium ions
分子名称: Beta-hemolysin, CALCIUM ION, CHLORIDE ION
著者Huseby, M, Shi, K, Kruse, A.C, Ohlendorf, D.H.
登録日2009-07-01
公開日2010-07-14
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Structure and biological functions of beta toxin from Staphylococcus aureus: Role of the hydrophobic beta hairpin in virulence
To be Published
4PDC
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Crystal structure of Cowpox virus CPXV018 (OMCP) bound to human NKG2D
分子名称: CPXV018 protein, NKG2-D type II integral membrane protein
著者Lazear, E, Nelson, C.A, Fremont, D.H, Center for Structural Genomics of Infectious Diseases (CSGID)
登録日2014-04-17
公開日2014-05-21
最終更新日2024-10-30
実験手法X-RAY DIFFRACTION (1.991 Å)
主引用文献Structural basis of cowpox evasion of NKG2D immunosurveillance
Biorxiv, 2019
3I50
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Crystal structure of the West Nile Virus envelope glycoprotein in complex with the E53 antibody Fab
分子名称: Envelope glycoprotein, murine heavy chain (IgG3) of E53 monoclonal antibody Fab, murine kappa light chain of E53 monoclonal antibody Fab
著者Nybakken, G.E, Warren, J.T, Chen, B.R, Nelson, C.A, Fremont, D.H.
登録日2009-07-03
公開日2009-10-27
最終更新日2013-09-25
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Structural basis for the preferential recognition of immature flaviviruses by a fusion-loop antibody.
Embo J., 28, 2009
3FXI
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Crystal structure of the human TLR4-human MD-2-E.coli LPS Ra complex
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 3-HYDROXY-TETRADECANOIC ACID, ...
著者Park, B.S, Song, D.H, Kim, H.M, Lee, J.-O.
登録日2009-01-21
公開日2009-03-03
最終更新日2024-11-06
実験手法X-RAY DIFFRACTION (3.1 Å)
主引用文献The structural basis of lipopolysaccharide recognition by the TLR4-MD-2 complex
Nature, 458, 2009
4MQM
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Crystal structure of Antigen 85C in presence of Ebselen
分子名称: Diacylglycerol acyltransferase/mycolyltransferase Ag85C
著者Favrot, L, Grzegorzewicz, A.E, Lajiness, D.H, Marvin, R.K, Boucau, J, Isailovic, D, Jackson, M, Ronning, D.R.
登録日2013-09-16
公開日2013-11-13
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.346 Å)
主引用文献Mechanism of inhibition of Mycobacterium tuberculosis antigen 85 by ebselen.
Nat Commun, 4, 2013
5W7P
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Crystal structure of OxaC
分子名称: OxaC, S-ADENOSYLMETHIONINE
著者Newmister, S.A, Romminger, S, Schmidt, J.J, Williams, R.M, Smith, J.L, Berlinck, R.G.S, Sherman, D.H.
登録日2017-06-20
公開日2018-06-27
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Unveiling sequential late-stage methyltransferase reactions in the meleagrin/oxaline biosynthetic pathway.
Org. Biomol. Chem., 16, 2018
3I0Q
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BU of 3i0q by Molmil
Crystal Structure of the AMP-bound complex of Spectinomycin Phosphotransferase, APH(9)-Ia
分子名称: ADENOSINE MONOPHOSPHATE, NICKEL (II) ION, Spectinomycin phosphotransferase
著者Berghuis, A.M, Fong, D.H, Lemke, C.T, Hwang, J.-Y, Xiong, B.
登録日2009-06-25
公開日2010-01-19
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Structure of the antibiotic resistance factor spectinomycin phosphotransferase from Legionella pneumophila.
J.Biol.Chem., 285, 2010
3HMP
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Crystal structure of human Mps1 catalytic domain in complex with a quinazolin ligand Compound 4
分子名称: 2-(2-(2-(2-(2-(2-ETHOXYETHOXY)ETHOXY)ETHOXY)ETHOXY)ETHOXY)ETHANOL, 7-chloro-N-(cyclopropylmethyl)quinazolin-4-amine, DI(HYDROXYETHYL)ETHER, ...
著者Chu, M.L.H, Chavas, L.M.G, Williams, D.H, Tabernero, L, Eyers, P.A.
登録日2009-05-29
公開日2010-02-02
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Biophysical and X-ray crystallographic analysis of Mps1 kinase inhibitor complexes.
Biochemistry, 49, 2010
5W7K
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Crystal structure of OxaG
分子名称: CHLORIDE ION, OxaG, S-ADENOSYL-L-HOMOCYSTEINE
著者Newmister, S.A, Romminger, S, Schmidt, J.J, Williams, R.M, Smith, J.L, Berlinck, R.G.S, Sherman, D.H.
登録日2017-06-20
公開日2018-06-27
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.994 Å)
主引用文献Unveiling sequential late-stage methyltransferase reactions in the meleagrin/oxaline biosynthetic pathway.
Org. Biomol. Chem., 16, 2018
5W7S
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BU of 5w7s by Molmil
Crystal structure of OxaC in complex with sinefungin and meleagrin
分子名称: (3E,7aR,12aS)-6-hydroxy-3-[(1H-imidazol-4-yl)methylidene]-12-methoxy-7a-(2-methylbut-3-en-2-yl)-7a,12-dihydro-1H,5H-imidazo[1',2':1,2]pyrido[2,3-b]indole-2,5(3H)-dione, OxaC, SINEFUNGIN
著者Newmister, S.A, Romminger, S, Schmidt, J.J, Williams, R.M, Smith, J.L, Berlinck, R.G.S, Sherman, D.H.
登録日2017-06-20
公開日2018-06-27
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.948 Å)
主引用文献Unveiling sequential late-stage methyltransferase reactions in the meleagrin/oxaline biosynthetic pathway.
Org. Biomol. Chem., 16, 2018
4P2P
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AN INDEPENDENT CRYSTALLOGRAPHIC REFINEMENT OF PORCINE PHOSPHOLIPASE A2 AT 2.4 ANGSTROMS RESOLUTION
分子名称: CALCIUM ION, PHOSPHOLIPASE A2
著者Finzel, B.C, Ohlendorf, D.H, Weber, P.C, Salemme, F.R.
登録日1991-10-22
公開日1992-01-15
最終更新日2024-11-06
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献An independent crystallographic refinement of porcine phospholipase A2 at 2.4 A resolution
Acta Crystallogr.,Sect.B, 47, 1991
5UUA
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Tetragonal thermolysin cryocooled to 100 K with 50% xylose as cryoprotectant
分子名称: CALCIUM ION, CHLORIDE ION, Thermolysin, ...
著者Juers, D.H.
登録日2017-02-16
公開日2017-03-08
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (1.60000384 Å)
主引用文献The impact of cryosolution thermal contraction on proteins and protein crystals: volumes, conformation and order.
Acta Crystallogr D Struct Biol, 74, 2018
2GRK
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BU of 2grk by Molmil
Crystal structure of ectromelia virus EVM1 chemokine binding protein
分子名称: EVM001
著者Arnold, P.L, Fremont, D.H.
登録日2006-04-24
公開日2006-05-09
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Structural determinants of chemokine binding by an ectromelia virus-encoded decoy receptor.
J.Virol., 80, 2006
5V2R
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BU of 5v2r by Molmil
Structure of a GA Rich 8x8 Nucleotide RNA Internal Loop
分子名称: RNA (5'-R(*CP*CP*AP*GP*AP*AP*AP*CP*GP*GP*AP*UP*GP*GP*A)-3')
著者Kauffmann, A.D, Kennedy, S.D, Turner, D.H.
登録日2017-03-06
公開日2017-07-26
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献Nuclear Magnetic Resonance Structure of an 8 8 Nucleotide RNA Internal Loop Flanked on Each Side by Three Watson-Crick Pairs and Comparison to Three-Dimensional Predictions.
Biochemistry, 56, 2017
3HXO
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Crystal Structure of Von Willebrand Factor (VWF) A1 Domain in Complex with DNA Aptamer ARC1172, an Inhibitor of VWF-Platelet Binding
分子名称: Aptamer ARC1172, von Willebrand factor
著者Huang, R.H, Sadler, J.E, Fremont, D.H, Diener, J.L, Schaub, R.G.
登録日2009-06-21
公開日2009-11-17
最終更新日2024-10-09
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献A structural explanation for the antithrombotic activity of ARC1172, a DNA aptamer that binds von Willebrand factor domain A1.
Structure, 17, 2009
3I41
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Crystal structure of beta toxin from Staphylococcus aureus F277A, P278A mutant
分子名称: Beta-hemolysin
著者Huseby, M, Shi, K, Kruse, A.C, Ohlendorf, D.H.
登録日2009-07-01
公開日2010-07-14
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Structure and biological functions of beta toxin from Staphylococcus aureus: Role of the hydrophobic beta hairpin in virulence
to be published
3I48
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Crystal structure of beta toxin from Staphylococcus aureus F277A, P278A mutant with bound magnesium ions
分子名称: Beta-hemolysin, MAGNESIUM ION, PHOSPHATE ION
著者Huseby, M, Shi, K, Kruse, A.C, Ohlendorf, D.H.
登録日2009-07-01
公開日2010-07-14
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structure and biological functions of beta toxin from Staphylococcus aureus: Role of the hydrophobic beta hairpin in virulence
to be published, 2009
3I5V
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Crystal structure of beta toxin 275-280 from Staphylococcus aureus
分子名称: Beta-hemolysin, DIACYL GLYCEROL
著者Huseby, M, Shi, K, Kruse, A.C, Ohlendorf, D.H.
登録日2009-07-06
公開日2010-08-11
最終更新日2024-10-30
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Structure and biological functions of beta toxin from Staphylococcus aureus: Role of the hydrophobic beta hairpin in virulence
To be Published
4OW1
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Crystal Structure of Resuscitation Promoting Factor C
分子名称: 1,2-ETHANEDIOL, Resuscitation-promoting factor RpfC
著者Chauviac, F.X, Quay, D.H.X, Cohen-Gonsaud, M, Keep, N.H.
登録日2014-01-29
公開日2014-06-18
最終更新日2024-10-09
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献The RpfC (Rv1884) atomic structure shows high structural conservation within the resuscitation-promoting factor catalytic domain.
Acta Crystallogr.,Sect.F, 70, 2014
2HG0
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Structure of the West Nile Virus envelope glycoprotein
分子名称: 2-acetamido-2-deoxy-alpha-D-glucopyranose-(1-4)-[beta-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, Envelope glycoprotein
著者Nybakken, G.E, Nelson, C.A, Chen, B.R, Diamond, M.S, Fremont, D.H.
登録日2006-06-26
公開日2006-11-07
最終更新日2024-10-30
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Crystal structure of the West Nile virus envelope glycoprotein.
J.Virol., 80, 2006

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