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PDB: 1222 results

2AQN
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CU/ZN superoxide dismutase from neisseria meningitidis
Descriptor: COPPER (I) ION, COPPER (II) ION, SULFATE ION, ...
Authors:DiDonato, M, Kassmann, C.J, Bruns, C.K, Cabelli, D.E, Cao, Z, Tabatabai, L.B, Kroll, J.S, Getzoff, E.D.
Deposit date:2005-08-18
Release date:2006-10-31
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:CU/ZN superoxide dismutase from neisseria meningitidis
To be Published
1TBW
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Ligand Induced Conformational Shift in the N-terminal Domain of GRP94, Open Conformation
Descriptor: ADENOSINE MONOPHOSPHATE, Endoplasmin, MAGNESIUM ION, ...
Authors:Gewirth, D.T, Immormino, R.M, Dollins, D.E, Shaffer, P.L, Walker, M.A, Soldano, K.L.
Deposit date:2004-05-20
Release date:2004-08-24
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Ligand-induced Conformational Shift in the N-terminal Domain of GRP94, an Hsp90 Chaperone.
J.Biol.Chem., 279, 2004
1HJ6
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ISOCITRATE DEHYDROGENASE S113E MUTANT COMPLEXED WITH ISOPROPYLMALATE, NADP+ AND MAGNESIUM (FLASH-COOLED)
Descriptor: 3-ISOPROPYLMALIC ACID, GLYCEROL, ISOCITRATE DEHYDROGENASE, ...
Authors:Doyle, S.A, Beernink, P.T, Koshland Junior, D.E.
Deposit date:2001-01-08
Release date:2001-01-16
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural Basis for a Change in Substrate Specificity: Crystal Structure of S113E Isocitrate Dehydrogenase in a Complex with Isopropylmalate, Mg2+ and Nadp
Biochemistry, 40, 2001
1TM7
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crystal structure of the complex of subtilisin BPN' with chymotrypsin inhibitor 2 M59Y mutant
Descriptor: CALCIUM ION, CITRIC ACID, PENTAETHYLENE GLYCOL, ...
Authors:Radisky, E.S, Kwan, G, Karen Lu, C.J, Koshland Jr, D.E.
Deposit date:2004-06-10
Release date:2004-11-09
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.59 Å)
Cite:Binding, Proteolytic, and Crystallographic Analyses of Mutations at the Protease-Inhibitor Interface of the Subtilisin BPN'/Chymotrypsin Inhibitor 2 Complex(,).
Biochemistry, 43, 2004
2A4H
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Solution structure of Sep15 from Drosophila melanogaster
Descriptor: Selenoprotein Sep15
Authors:Ferguson, A.D, Labunskyy, V.M, Fomenko, D.E, Chelliah, Y, Amezcua, C.A, Rizo, J, Gladyshev, V.N, Deisenhofer, J.
Deposit date:2005-06-28
Release date:2005-12-13
Last modified:2022-03-09
Method:SOLUTION NMR
Cite:NMR Structures of the Selenoproteins Sep15 and SelM Reveal Redox Activity of a New Thioredoxin-like Family.
J.Biol.Chem., 281, 2006
1TC0
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Ligand Induced Conformational Shifts in the N-terminal Domain of GRP94, Open Conformation Complexed with the physiological partner ATP
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, Endoplasmin, MAGNESIUM ION, ...
Authors:Gewirth, D.T, Immormino, R.M, Dollins, D.E, Shaffer, P.L, Walker, M.A, Soldano, K.L.
Deposit date:2004-05-20
Release date:2004-08-24
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Ligand-induced Conformational Shift in the N-terminal Domain of GRP94, an Hsp90 Chaperone.
J.Biol.Chem., 279, 2004
1T5G
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Arginase-F2-L-Arginine complex
Descriptor: ARGININE, Arginase 1, FLUORIDE ION, ...
Authors:Cama, E, Pethe, S, Boucher, J.-L, Han, S, Emig, F.A, Ash, D.E, Viola, R.E, Mansuy, D, Christianson, D.W.
Deposit date:2004-05-04
Release date:2004-10-12
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Inhibitor coordination interactions in the binuclear manganese cluster of arginase
Biochemistry, 43, 2004
1T64
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Crystal Structure of human HDAC8 complexed with Trichostatin A
Descriptor: CALCIUM ION, Histone deacetylase 8, SODIUM ION, ...
Authors:Somoza, J.R, Skene, R.J, Katz, B.A, Mol, C, Ho, J.D, Jennings, A.J, Luong, C, Arvai, A, Buggy, J.J, Chi, E, Tang, J, Sang, B.-C, Verner, E, Wynands, R, Leahy, E.M, Dougan, D.R, Snell, G, Navre, M, Knuth, M.W, Swanson, R.V, McRee, D.E, Tari, L.W.
Deposit date:2004-05-05
Release date:2004-07-27
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural Snapshots of Human HDAC8 Provide Insights into the Class I Histone Deacetylases
Structure, 12, 2004
1TA1
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H141C mutant of rat liver arginase I
Descriptor: Arginase 1, GLYCEROL, MANGANESE (II) ION
Authors:Cama, E, Cox, J.D, Ash, D.E, Christianson, D.W.
Deposit date:2004-05-19
Release date:2005-08-16
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Probing the role of the hyper-reactive histidine residue of arginase.
Arch.Biochem.Biophys., 444, 2005
1TLU
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Crystal Structure of Thermotoga maritima S-adenosylmethionine decarboxylase
Descriptor: S-adenosylmethionine decarboxylase proenzyme, AdoMetDC, SamDC
Authors:Toms, A.V, Kinsland, C, McCloskey, D.E, Pegg, A.E, Ealick, S.E.
Deposit date:2004-06-09
Release date:2004-06-29
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Evolutionary Links as Revealed by the Structure of Thermotoga maritima S-Adenosylmethionine Decarboxylase.
J.Biol.Chem., 279, 2004
1TMI
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Structure of Thermotoga maritima S63A non-processing mutant S-adenosylmethionine decarboxylase
Descriptor: S-adenosylmethionine decarboxylase proenzyme, AdoMetDC, SamDC
Authors:Toms, A.V, Kinsland, C, McCloskey, D.E, Pegg, A.E, Ealick, S.E.
Deposit date:2004-06-10
Release date:2004-06-29
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Evolutionary Links as Revealed by the Structure of Thermotoga maritima S-Adenosylmethionine Decarboxylase.
J.Biol.Chem., 279, 2004
1CCL
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PROBING THE STRENGTH AND CHARACTER OF AN ASP-HIS-X HYDROGEN BOND BY INTRODUCING BURIED CHARGES
Descriptor: CYTOCHROME C PEROXIDASE, PROTOPORPHYRIN IX CONTAINING FE
Authors:Cao, Y, Goodin, D.B, Mcree, D.E.
Deposit date:1998-01-02
Release date:1998-11-25
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (2 Å)
Cite:Probing the Strength and Character of an Asp-His-X Hydrogen Bond by Introducing Buried Charges
To be Published
1SZX
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Role Of Hydrogen Bonding In The Active Site Of Human Manganese Superoxide Dismutase
Descriptor: MANGANESE (II) ION, Superoxide dismutase [Mn], mitochondrial
Authors:Greenleaf, W.B, Perry, J.J, Hearn, A.S, Cabelli, D.E, Lepock, J.R, Stroupe, M.E, Tainer, J.A, Nick, H.S, Silverman, D.N.
Deposit date:2004-04-06
Release date:2004-04-27
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Role of hydrogen bonding in the active site of human manganese superoxide dismutase.
Biochemistry, 43, 2004
3NMD
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Crystal structure of the leucine zipper domain of cGMP dependent protein kinase I beta
Descriptor: GLYCEROL, HEXANE-1,6-DIOL, cGMP Dependent PRotein Kinase
Authors:Kim, C, Casteel, D.E, Smith-Nguyen, E.V, Sankaran, B, Berkeley Structural Genomics Center (BSGC)
Deposit date:2010-06-22
Release date:2010-09-08
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.272 Å)
Cite:A crystal structure of the cyclic GMP-dependent protein kinase I{beta} dimerization/docking domain reveals molecular details of isoform-specific anchoring.
J.Biol.Chem., 285, 2010
1TC6
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Ligand Induced Conformational Shift in the N-terminal Domain of GRP94, Open Conformation ADP-Complex
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Endoplasmin, MAGNESIUM ION, ...
Authors:Gewirth, D.T, Immormino, R.M, Dollins, D.E, Shaffer, P.L, Walker, M.A, Soldano, K.L.
Deposit date:2004-05-20
Release date:2004-08-24
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.87 Å)
Cite:Ligand-induced Conformational Shift in the N-terminal Domain of GRP94, an Hsp90 Chaperone.
J.Biol.Chem., 279, 2004
2E34
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L11 structure with RDC and RG refinement
Descriptor: 50S ribosomal protein L11
Authors:Lee, D, Walsh, J.D, Yu, P, Markus, M.A, Choli-Papadopoulous, T, Schwieters, C.D, Krueger, S, Draper, D.E, Wang, Y.X.
Deposit date:2006-11-20
Release date:2007-06-19
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:The structure of free L11 and functional dynamics of L11 in free, L11-rRNA(58 nt) binary and L11-rRNA(58 nt)-thiostrepton ternary complexes
J.Mol.Biol., 367, 2007
2E4O
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X-ray Crystal Structure of Aristolochene Synthase from Aspergillus terreus and the Evolution of Templates for the Cyclization of Farnesyl Diphosphate
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, Aristolochene synthase, BETA-MERCAPTOETHANOL, ...
Authors:Shishova, E.Y, Di Costanzo, L, Cane, D.E, Christianson, D.W.
Deposit date:2006-12-15
Release date:2007-01-23
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:X-ray crystal structure of aristolochene synthase from Aspergillus terreus and evolution of templates for the cyclization of farnesyl diphosphate.
Biochemistry, 46, 2007
1T0A
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Crystal Structure of 2C-Methyl-D-Erythritol-2,4-cyclodiphosphate Synthase from Shewanella Oneidensis
Descriptor: 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, COBALT (II) ION, FARNESYL DIPHOSPHATE, ...
Authors:Ni, S, Robinson, H, Marsing, G.C, Bussiere, D.E, Kennedy, M.A.
Deposit date:2004-04-08
Release date:2004-10-26
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structure of 2C-methyl-D-erythritol-2,4-cyclodiphosphate synthase from Shewanella oneidensis at 1.6 A: identification of farnesyl pyrophosphate trapped in a hydrophobic cavity.
Acta Crystallogr.,Sect.D, 60, 2004
2AQS
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CU/ZN superoxide dismutase from neisseria meningitidis K91E, K94E double mutant
Descriptor: COPPER (I) ION, COPPER (II) ION, Superoxide dismutase [Cu-Zn], ...
Authors:DiDonato, M, Kassmann, C.J, Bruns, C.K, Cabelli, D.E, Cao, Z, Tabatabai, L.B, Kroll, J.S, Getzoff, E.D.
Deposit date:2005-08-18
Release date:2006-10-31
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:CU/ZN superoxide dismutase from neisseria meningitidis K91E, K94E double mutant
To be Published
1J5E
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Structure of the Thermus thermophilus 30S Ribosomal Subunit
Descriptor: 16S ribosomal RNA, 30S RIBOSOMAL PROTEIN S10, 30S RIBOSOMAL PROTEIN S11, ...
Authors:Wimberly, B.T, Brodersen, D.E, Clemons Jr, W.M, Morgan-Warren, R, Carter, A.P, Vonrhein, C, Hartsch, T, Ramakrishnan, V.
Deposit date:2002-04-08
Release date:2002-04-12
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (3.05 Å)
Cite:Structure of the 30S ribosomal subunit.
Nature, 407, 2000
2AGE
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Succinyl-AAPR-trypsin acyl-enzyme at 1.15 A resolution
Descriptor: CALCIUM ION, Cationic trypsin, succinyl-Ala-Ala-Pro-Arg
Authors:Radisky, E.S, Lee, J.M, Lu, C.J, Koshland Jr, D.E.
Deposit date:2005-07-26
Release date:2006-05-16
Last modified:2024-04-24
Method:X-RAY DIFFRACTION (1.15 Å)
Cite:Insights into the serine protease mechanism from atomic resolution structures of trypsin reaction intermediates
Proc.Natl.Acad.Sci.USA, 103, 2006
3TND
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Crystal structure of Shigella flexneri VapBC toxin-antitoxin complex
Descriptor: Antitoxin VapB, SODIUM ION, SULFATE ION, ...
Authors:Dienemann, C, Boggild, A, Winther, K.S, Gerdes, K, Brodersen, D.E.
Deposit date:2011-09-01
Release date:2011-11-02
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Crystal Structure of the VapBC Toxin-Antitoxin Complex from Shigella flexneri Reveals a Hetero-Octameric DNA-Binding Assembly.
J.Mol.Biol., 414, 2011
3TJW
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Crystal Structure of Quasiracemic Villin Headpiece Subdomain Containing (F5Phe10) Substitution
Descriptor: D-Villin-1, L-Villin-1, SULFATE ION
Authors:Mortenson, D.E, Satyshur, K.A, Gellman, S.H, Forest, K.T.
Deposit date:2011-08-25
Release date:2012-01-25
Last modified:2017-11-08
Method:X-RAY DIFFRACTION (1.46 Å)
Cite:Quasiracemic crystallization as a tool to assess the accommodation of noncanonical residues in nativelike protein conformations.
J.Am.Chem.Soc., 134, 2012
1TO1
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crystal structure of the complex of subtilisin BPN' with chymotrypsin inhibitor 2 Y61A mutant
Descriptor: CALCIUM ION, CITRIC ACID, PENTAETHYLENE GLYCOL, ...
Authors:Radisky, E.S, Kwan, G, Karen Lu, C.J, Koshland Jr, D.E.
Deposit date:2004-06-11
Release date:2004-11-09
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.68 Å)
Cite:Binding, Proteolytic, and Crystallographic Analyses of Mutations at the Protease-Inhibitor Interface of the Subtilisin BPN'/Chymotrypsin Inhibitor 2 Complex(,).
Biochemistry, 43, 2004
2AX1
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Hepatitis C Virus NS5b RNA Polymerase in complex with a covalent inhibitor (5ee)
Descriptor: 5R-(3,4-DICHLOROPHENYLMETHYL)-3-(2-THIOPHENESULFONYLAMINO)-4-OXO-2-THIONOTHIAZOLIDINE, Genome polyprotein, SULFATE ION
Authors:Powers, J.P, Piper, D.E, Li, Y, Mayorga, V, Anzola, J, Chen, J.M, Jaen, J.C, Lee, G, Liu, J, Peterson, M.G, Tonn, G.R, Ye, Q, Walker, N.P, Wang, Z.
Deposit date:2005-09-02
Release date:2006-01-24
Last modified:2021-10-20
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:SAR and Mode of Action of Novel Non-Nucleoside Inhibitors of Hepatitis C NS5b RNA Polymerase.
J.Med.Chem., 49, 2006

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