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PDB: 22172 results

1AK0
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P1 NUCLEASE IN COMPLEX WITH A SUBSTRATE ANALOG
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ADENOSINE-5'-(DITHIO)PHOSPHATE, ...
Authors:Romier, C, Suck, D.
Deposit date:1997-05-28
Release date:1997-12-03
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Recognition of single-stranded DNA by nuclease P1: high resolution crystal structures of complexes with substrate analogs.
Proteins, 32, 1998
8QV0
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BU of 8qv0 by Molmil
Structure of the native microtubule lattice nucleated from the yeast spindle pole body
Descriptor: Tubulin alpha-1 chain, Tubulin beta chain
Authors:Dendooven, T, Yatskevich, S, Burt, A, Bellini, D, Kilmartin, J, Barford, D.
Deposit date:2023-10-17
Release date:2024-04-24
Method:ELECTRON MICROSCOPY (6.6 Å)
Cite:Structure of the native gamma-tubulin ring complex capping spindle microtubules.
Nat.Struct.Mol.Biol., 2024
1R7D
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BU of 1r7d by Molmil
NMR structure of the membrane anchor domain (1-31) of the nonstructural protein 5A (NS5A) of hepatitis C virus (Ensemble of 51 structures, sample in 50% tfe)
Descriptor: Genome polyprotein
Authors:Penin, F, Brass, V, Appel, N, Ramboarina, S, Montserret, R, Ficheux, D, Blum, H.E, Bartenschlager, R, Moradpour, D.
Deposit date:2003-10-21
Release date:2004-08-10
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Structure and function of the membrane anchor domain of hepatitis C virus nonstructural protein 5A.
J.Biol.Chem., 279, 2004
1YQ3
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BU of 1yq3 by Molmil
Avian respiratory complex ii with oxaloacetate and ubiquinone
Descriptor: 1,2-dioleoyl-sn-glycero-3-phosphoethanolamine, Coenzyme Q10, (2Z,6E,10Z,14E,18E,22E,26Z)-isomer, ...
Authors:Huang, L, Cobessi, D, Tung, E.Y, Berry, E.A.
Deposit date:2005-02-01
Release date:2005-12-20
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:3-Nitropropionic Acid Is a Suicide Inhibitor of Mitochondrial Respiration That, upon Oxidation by Complex II, Forms a Covalent Adduct with a Catalytic Base Arginine in the Active Site of the Enzyme
J.Biol.Chem., 281, 2006
1A5Y
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BU of 1a5y by Molmil
PROTEIN TYROSINE PHOSPHATASE 1B CYSTEINYL-PHOSPHATE INTERMEDIATE
Descriptor: PROTEIN TYROSINE PHOSPHATASE 1B
Authors:Pannifer, A.D.P, Flint, A.J, Tonks, N.K, Barford, D.
Deposit date:1998-02-19
Release date:1998-06-17
Last modified:2023-08-02
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Visualization of the cysteinyl-phosphate intermediate of a protein-tyrosine phosphatase by x-ray crystallography.
J.Biol.Chem., 273, 1998
6XF8
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BU of 6xf8 by Molmil
DLP 5 fold
Descriptor: Inner capsid protein lambda-1, Inner capsid protein sigma-2, Outer capsid protein mu-1, ...
Authors:Sutton, G, Sun, D.P, Fu, X.F, Kotecha, A, Hecksel, G.W, Clare, D.K, Zhang, P, Stuart, D, Boyce, M.
Deposit date:2020-06-15
Release date:2020-09-23
Method:ELECTRON MICROSCOPY (6.5 Å)
Cite:Assembly intermediates of orthoreovirus captured in the cell.
Nat Commun, 11, 2020
7W3H
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BU of 7w3h by Molmil
Structure of USP14-bound human 26S proteasome in substrate-engaged state ED2.1_USP14
Descriptor: 26S protease regulatory subunit 4, 26S protease regulatory subunit 6A, 26S protease regulatory subunit 6B, ...
Authors:Zhang, S, Zou, S, Yin, D, Wu, Z, Mao, Y.
Deposit date:2021-11-25
Release date:2022-05-04
Last modified:2022-06-01
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:USP14-regulated allostery of the human proteasome by time-resolved cryo-EM.
Nature, 605, 2022
8QRY
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Crystal structure of the yeast spindle body component Spc98
Descriptor: Spindle pole body component
Authors:Bellini, D, Yatskevich, S, Barford, D.
Deposit date:2023-10-09
Release date:2024-04-03
Method:X-RAY DIFFRACTION (1.87 Å)
Cite:Crystal structure of the yeast spindle body component Spc98
To Be Published
7W39
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BU of 7w39 by Molmil
Structure of USP14-bound human 26S proteasome in state EA2.1_UBL
Descriptor: 26S protease regulatory subunit 4, 26S protease regulatory subunit 6A, 26S protease regulatory subunit 6B, ...
Authors:Zhang, S, Zou, S, Yin, D, Wu, Z, Mao, Y.
Deposit date:2021-11-25
Release date:2022-05-04
Last modified:2022-06-01
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:USP14-regulated allostery of the human proteasome by time-resolved cryo-EM.
Nature, 605, 2022
7W3J
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BU of 7w3j by Molmil
Structure of USP14-bound human 26S proteasome in substrate-inhibited state SC_USP14
Descriptor: 26S protease regulatory subunit 4, 26S protease regulatory subunit 6A, 26S protease regulatory subunit 6B, ...
Authors:Zhang, S, Zou, S, Yin, D, Wu, Z, Mao, Y.
Deposit date:2021-11-25
Release date:2022-05-04
Last modified:2022-06-01
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:USP14-regulated allostery of the human proteasome by time-resolved cryo-EM.
Nature, 605, 2022
7W3B
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BU of 7w3b by Molmil
Structure of USP14-bound human 26S proteasome in substrate-engaged state ED5_USP14
Descriptor: 26S protease regulatory subunit 4, 26S protease regulatory subunit 6A, 26S protease regulatory subunit 6B, ...
Authors:Zhang, S, Zou, S, Yin, D, Wu, Z, Mao, Y.
Deposit date:2021-11-25
Release date:2022-05-04
Last modified:2022-06-01
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:USP14-regulated allostery of the human proteasome by time-resolved cryo-EM.
Nature, 605, 2022
7W3A
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BU of 7w3a by Molmil
Structure of USP14-bound human 26S proteasome in substrate-engaged state ED4_USP14
Descriptor: 26S protease regulatory subunit 4, 26S protease regulatory subunit 6A, 26S protease regulatory subunit 6B, ...
Authors:Zhang, S, Zou, S, Yin, D, Wu, Z, Mao, Y.
Deposit date:2021-11-25
Release date:2022-05-04
Last modified:2022-06-01
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:USP14-regulated allostery of the human proteasome by time-resolved cryo-EM.
Nature, 605, 2022
7W3G
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BU of 7w3g by Molmil
Structure of USP14-bound human 26S proteasome in substrate-engaged state ED2.0_USP14
Descriptor: 26S protease regulatory subunit 4, 26S protease regulatory subunit 6A, 26S protease regulatory subunit 6B, ...
Authors:Zhang, S, Zou, S, Yin, D, Wu, Z, Mao, Y.
Deposit date:2021-11-25
Release date:2022-05-04
Last modified:2022-06-01
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:USP14-regulated allostery of the human proteasome by time-resolved cryo-EM.
Nature, 605, 2022
7W37
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BU of 7w37 by Molmil
Structure of USP14-bound human 26S proteasome in state EA1_UBL
Descriptor: 26S protease regulatory subunit 4, 26S protease regulatory subunit 6A, 26S protease regulatory subunit 6B, ...
Authors:Zhang, S, Zou, S, Yin, D, Wu, Z, Mao, Y.
Deposit date:2021-11-25
Release date:2022-05-04
Last modified:2022-06-01
Method:ELECTRON MICROSCOPY (3 Å)
Cite:USP14-regulated allostery of the human proteasome by time-resolved cryo-EM.
Nature, 605, 2022
1AHO
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BU of 1aho by Molmil
THE AB INITIO STRUCTURE DETERMINATION AND REFINEMENT OF A SCORPION PROTEIN TOXIN
Descriptor: TOXIN II
Authors:Smith, G.D, Blessing, R.H, Ealick, S.E, Fontecilla-Camps, J.C, Hauptman, H.A, Housset, D, Langs, D.A, Miller, R.
Deposit date:1997-04-08
Release date:1997-10-15
Last modified:2024-06-05
Method:X-RAY DIFFRACTION (0.96 Å)
Cite:Ab initio structure determination and refinement of a scorpion protein toxin.
Acta Crystallogr.,Sect.D, 53, 1997
7W3K
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BU of 7w3k by Molmil
Structure of USP14-bound human 26S proteasome in substrate-inhibited state SD4_USP14
Descriptor: 26S protease regulatory subunit 4, 26S protease regulatory subunit 6A, 26S protease regulatory subunit 6B, ...
Authors:Zhang, S, Zou, S, Yin, D, Wu, Z, Mao, Y.
Deposit date:2021-11-25
Release date:2022-05-04
Last modified:2022-06-01
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:USP14-regulated allostery of the human proteasome by time-resolved cryo-EM.
Nature, 605, 2022
7W3C
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BU of 7w3c by Molmil
Structure of USP14-bound human 26S proteasome in substrate-engaged state ED0_USP14
Descriptor: 26S protease regulatory subunit 4, 26S protease regulatory subunit 6A, 26S protease regulatory subunit 6B, ...
Authors:Zhang, S, Zou, S, Yin, D, Wu, Z, Mao, Y.
Deposit date:2021-11-25
Release date:2022-05-04
Last modified:2022-06-01
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:USP14-regulated allostery of the human proteasome by time-resolved cryo-EM.
Nature, 605, 2022
1ABB
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BU of 1abb by Molmil
CONTROL OF PHOSPHORYLASE B CONFORMATION BY A MODIFIED COFACTOR: CRYSTALLOGRAPHIC STUDIES ON R-STATE GLYCOGEN PHOSPHORYLASE RECONSTITUTED WITH PYRIDOXAL 5'-DIPHOSPHATE
Descriptor: GLYCOGEN PHOSPHORYLASE B, INOSINIC ACID, PYRIDOXAL-5'-DIPHOSPHATE, ...
Authors:Leonidas, D.D, Oikonomakos, N.G, Papageorgiou, A.C, Acharya, K.R, Barford, D, Johnson, L.N.
Deposit date:1992-04-09
Release date:1993-10-31
Last modified:2024-06-05
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Control of phosphorylase b conformation by a modified cofactor: crystallographic studies on R-state glycogen phosphorylase reconstituted with pyridoxal 5'-diphosphate.
Protein Sci., 1, 1992
3WW7
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BU of 3ww7 by Molmil
Crystal structure of the computationally designed Pizza2 protein
Descriptor: GLYCEROL, Pizza2 protein
Authors:Voet, A.R.D, Noguchi, H, Addy, C, Simoncini, D, Terada, D, Unzai, S, Park, S.Y, Zhang, K.Y.J, Tame, J.R.H.
Deposit date:2014-06-17
Release date:2014-10-08
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.697 Å)
Cite:Computational design of a self-assembling symmetrical beta-propeller protein.
Proc.Natl.Acad.Sci.USA, 111, 2014
8QV3
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BU of 8qv3 by Molmil
Structure of the y-Tubulin Small Complex (yTuSC) as part of the native y-Tubulin Ring Complex (yTuRC) capping microtubule minus ends at the spindle pole body
Descriptor: GUANOSINE-5'-TRIPHOSPHATE, Spindle pole body component, Spindle pole body component 110, ...
Authors:Dendooven, T, Yatskevich, S, Burt, A, Bellini, D, Kilmartin, J, Barford, D.
Deposit date:2023-10-17
Release date:2024-04-24
Method:ELECTRON MICROSCOPY (8.2 Å)
Cite:Structure of the native gamma-tubulin ring complex capping spindle microtubules.
Nat.Struct.Mol.Biol., 2024
8QV2
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BU of 8qv2 by Molmil
Structure of the native y-Tubulin Ring Complex (yTuRC) capping microtubule minus ends at the spindle pole body
Descriptor: GUANOSINE-5'-DIPHOSPHATE, GUANOSINE-5'-TRIPHOSPHATE, Spindle pole body component, ...
Authors:Dendooven, T, Yatskevich, S, Burt, A, Bellini, D, Kilmartin, J, Barford, D.
Deposit date:2023-10-17
Release date:2024-04-24
Method:ELECTRON MICROSCOPY (9.2 Å)
Cite:Structure of the native gamma-tubulin ring complex capping spindle microtubules.
Nat.Struct.Mol.Biol., 2024
1AYE
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BU of 1aye by Molmil
HUMAN PROCARBOXYPEPTIDASE A2
Descriptor: PROCARBOXYPEPTIDASE A2, ZINC ION
Authors:Garcia-Saez, I, Reverte, D, Vendrell, J, Aviles, F.X, Coll, M.
Deposit date:1997-11-03
Release date:1999-01-13
Last modified:2023-08-02
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:The three-dimensional structure of human procarboxypeptidase A2. Deciphering the basis of the inhibition, activation and intrinsic activity of the zymogen.
EMBO J., 16, 1997
1U9C
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BU of 1u9c by Molmil
Crystallographic structure of APC35852
Descriptor: APC35852
Authors:Borek, D, Chen, Y, Shao, D, Collart, F, Joachimiak, A, Otwinowski, Z, Midwest Center for Structural Genomics (MCSG)
Deposit date:2004-08-09
Release date:2004-10-05
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:Structural analysis of DJI superfamily
To be Published
5MVQ
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Crystal structure of an unmodified, self-complementary dodecamer.
Descriptor: DNA, MAGNESIUM ION
Authors:Hardwick, J.S, Ptchelkine, D, Phillips, S.E.V, Brown, T.
Deposit date:2017-01-17
Release date:2017-05-10
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.604 Å)
Cite:5-Formylcytosine does not change the global structure of DNA.
Nat. Struct. Mol. Biol., 24, 2017
5MVU
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BU of 5mvu by Molmil
Crystal structure of an A-DNA dodecamer containing 5-formylcytosine in 3 consecutive CpG steps
Descriptor: DNA
Authors:Hardwick, J.S, Ptchelkine, D, Phillips, S.E.V, Brown, T.
Deposit date:2017-01-17
Release date:2017-05-10
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:5-Formylcytosine does not change the global structure of DNA.
Nat. Struct. Mol. Biol., 24, 2017

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