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PDB: 22322 results

7LUC
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BU of 7luc by Molmil
Cryo-EM structure of RSV preF bound by Fabs 32.4K and 01.4B
Descriptor: 01.4B Fab Heavy chain, 01.4B Fab Light chain, 32.4K Fab Heavy chain, ...
Authors:Wrapp, D, McLellan, J.S.
Deposit date:2021-02-22
Release date:2021-04-21
Last modified:2021-04-28
Method:ELECTRON MICROSCOPY (3.21 Å)
Cite:Vaccination with prefusion-stabilized respiratory syncytial virus fusion protein induces genetically and antigenically diverse antibody responses.
Immunity, 54, 2021
7M0R
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BU of 7m0r by Molmil
Cryo-EM structure of the Sema3A/PlexinA4/Neuropilin 1 complex
Descriptor: CALCIUM ION, Neuropilin-1, Plexin-A4, ...
Authors:Lu, D, Shang, G, He, X, Bai, X, Zhang, X.
Deposit date:2021-03-11
Release date:2021-05-05
Last modified:2021-06-09
Method:ELECTRON MICROSCOPY (3.7 Å)
Cite:Architecture of the Sema3A/PlexinA4/Neuropilin tripartite complex.
Nat Commun, 12, 2021
3T3A
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BU of 3t3a by Molmil
Crystal structure of H107R mutant of extracellular domain of mouse receptor NKR-P1A
Descriptor: Killer cell lectin-like receptor subfamily B member 1A, PHOSPHATE ION
Authors:Kolenko, P, Rozbesky, D, Bezouska, K, Hasek, J, Dohnalek, J.
Deposit date:2011-07-25
Release date:2011-08-10
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structure of the H107R variant of the extracellular domain of mouse NKR-P1A at 2.3 A resolution.
Acta Crystallogr.,Sect.F, 67, 2011
3RGD
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BU of 3rgd by Molmil
Iron loaded frog M ferritin. Short soaking time
Descriptor: FE (III) ION, Ferritin, middle subunit
Authors:Bertini, I, Lalli, D, Mangani, S, Pozzi, C, Rosa, C, Theil, E.C, Turano, P.
Deposit date:2011-04-08
Release date:2012-04-11
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.89 Å)
Cite:Structural insights into the ferroxidase site of ferritins from higher eukaryotes.
J.Am.Chem.Soc., 134, 2012
7KBV
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BU of 7kbv by Molmil
Solution structure of the major MYC promoter G-quadruplex with a wild-type flanking sequence
Descriptor: Myc2345
Authors:Dickerhoff, J, Yang, D.
Deposit date:2020-10-03
Release date:2021-06-23
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Structural recognition of the MYC promoter G-quadruplex by a quinoline derivative: insights into molecular targeting of parallel G-quadruplexes.
Nucleic Acids Res., 49, 2021
7KBW
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BU of 7kbw by Molmil
Solution structure of the major MYC promoter G-quadruplex with a wild-type flanking in complex with NSC85697, a quinoline derivative
Descriptor: 2-[(~{E})-2-(3-methoxy-4-oxidanyl-phenyl)ethenyl]-1-methyl-quinoline-4-carboxamide, Myc2345
Authors:Dickerhoff, J, Yang, D.
Deposit date:2020-10-03
Release date:2021-06-23
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Structural recognition of the MYC promoter G-quadruplex by a quinoline derivative: insights into molecular targeting of parallel G-quadruplexes.
Nucleic Acids Res., 49, 2021
7KEF
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BU of 7kef by Molmil
RNA polymerase II elongation complex with unnatural base dTPT3, rNaM in swing state
Descriptor: (1S)-1,4-anhydro-1-(3-methoxynaphthalen-2-yl)-5-O-phosphono-D-ribitol, DNA-directed RNA polymerase II subunit RPB1, DNA-directed RNA polymerase II subunit RPB11, ...
Authors:Oh, J, Wang, D.
Deposit date:2020-10-10
Release date:2021-06-23
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (3.89 Å)
Cite:Transcriptional processing of an unnatural base pair by eukaryotic RNA polymerase II.
Nat.Chem.Biol., 17, 2021
7KED
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BU of 7ked by Molmil
RNA polymerase II elongation complex with unnatural base dTPT3
Descriptor: DNA-directed RNA polymerase II subunit RPB1, DNA-directed RNA polymerase II subunit RPB11, DNA-directed RNA polymerase II subunit RPB2, ...
Authors:Oh, J, Wang, W, Wang, D.
Deposit date:2020-10-10
Release date:2021-06-23
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (3.6 Å)
Cite:Transcriptional processing of an unnatural base pair by eukaryotic RNA polymerase II.
Nat.Chem.Biol., 17, 2021
7KBX
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BU of 7kbx by Molmil
Solution structure of the major MYC promoter G-quadruplex in complex with NSC85697, a quinoline derivative
Descriptor: 2-[(~{E})-2-(3-methoxy-4-oxidanyl-phenyl)ethenyl]-1-methyl-quinoline-4-carboxamide, Myc2345_T23
Authors:Dickerhoff, J, Yang, D.
Deposit date:2020-10-03
Release date:2021-06-23
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Structural recognition of the MYC promoter G-quadruplex by a quinoline derivative: insights into molecular targeting of parallel G-quadruplexes.
Nucleic Acids Res., 49, 2021
3RKE
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BU of 3rke by Molmil
Crystal Structure of goat Lactoperoxidase complexed with a tightly bound inhibitor, 4-aminophenyl-4H-imidazole-1-yl methanone at 2.3 A resolution
Descriptor: (4-aminophenyl)-imidazol-1-yl-methanone, 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Dube, D, Singh, R.P, Sinha, M, Singh, A.K, Kaur, P, Sharma, S, Singh, T.P.
Deposit date:2011-04-18
Release date:2011-05-04
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal Structure of goat Lactoperoxidase complexed with a tightly bound inhibitor, 4-aminophenyl-4H-imidazole-1-yl methanone at 2.3 A resolution
TO BE PUBLISHED
7KEE
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BU of 7kee by Molmil
RNA polymerase II elongation complex with unnatural base dTPT3, rNaMTP bound to E-site
Descriptor: (1S)-1,4-anhydro-5-O-[(R)-hydroxy{[(S)-hydroxy(phosphonooxy)phosphoryl]oxy}phosphoryl]-1-(3-methoxynaphthalen-2-yl)-D-ribitol, DNA-directed RNA polymerase II subunit RPB1, DNA-directed RNA polymerase II subunit RPB11, ...
Authors:Oh, J, Wang, D.
Deposit date:2020-10-10
Release date:2021-06-23
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (3.45 Å)
Cite:Transcriptional processing of an unnatural base pair by eukaryotic RNA polymerase II.
Nat.Chem.Biol., 17, 2021
6R8N
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BU of 6r8n by Molmil
STRUCTURE DETERMINATION OF THE TETRAHEDRAL AMINOPEPTIDASE TET2 FROM P. HORIKOSHII BY USE OF COMBINED SOLID-STATE NMR, SOLUTION-STATE NMR AND EM DATA 4.1 A, FOLLOWED BY REAL_SPACE_REFINEMENT AT 4.1 A
Descriptor: Tetrahedral aminopeptidase, ZINC ION
Authors:Colletier, J.-P, Gauto, D, Estrozi, L, Favier, A, Effantin, G, Schoehn, G, Boisbouvier, J, Schanda, P.
Deposit date:2019-04-02
Release date:2019-08-14
Last modified:2023-09-13
Method:ELECTRON MICROSCOPY (4.1 Å), SOLUTION NMR
Cite:Integrated NMR and cryo-EM atomic-resolution structure determination of a half-megadalton enzyme complex.
Nat Commun, 10, 2019
3RNT
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BU of 3rnt by Molmil
CRYSTAL STRUCTURE OF GUANOSINE-FREE RIBONUCLEASE T1, COMPLEXED WITH VANADATE(V), SUGGESTS CONFORMATIONAL CHANGE UPON SUBSTRATE BINDING
Descriptor: CALCIUM ION, RIBONUCLEASE T1, VANADATE ION
Authors:Kostrewa, D, Choe, H.-W, Heinemann, U, Saenger, W.
Deposit date:1989-05-31
Release date:1989-10-15
Last modified:2017-11-29
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structure of guanosine-free ribonuclease T1, complexed with vanadate (V), suggests conformational change upon substrate binding.
Biochemistry, 28, 1989
7LOR
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BU of 7lor by Molmil
X-ray radiation damage series on Lysozyme at 277K, multi-conformer model, dataset 3
Descriptor: CHLORIDE ION, Lysozyme C, SODIUM ION
Authors:Yabukarski, F, Doukov, T, Herschlag, D.
Deposit date:2021-02-10
Release date:2022-02-23
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.52 Å)
Cite:Evaluating the impact of X-ray damage on conformational heterogeneity in room-temperature (277 K) and cryo-cooled protein crystals.
Acta Crystallogr D Struct Biol, 78, 2022
7LK6
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BU of 7lk6 by Molmil
X-ray radiation damage series on Thaumatin at 277K, multi-conformer model, dataset 4
Descriptor: L(+)-TARTARIC ACID, Thaumatin I
Authors:Yabukarski, F, Doukov, T, Herschlag, D.
Deposit date:2021-02-01
Release date:2022-02-23
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.48 Å)
Cite:Evaluating the impact of X-ray damage on conformational heterogeneity in room-temperature (277 K) and cryo-cooled protein crystals.
Acta Crystallogr D Struct Biol, 78, 2022
3R9K
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BU of 3r9k by Molmil
Crystal structure of pyrophosphatase from bacteroides thetaiotaomicron, glu47asp mutant complexed with sulfate, a closed cap conformation
Descriptor: Putative beta-phosphoglucomutase, SULFATE ION
Authors:Patskovsky, Y, Huang, H, Toro, R, Gerlt, J.A, Burley, S.K, Dunaway-Mariano, D, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC), Enzyme Function Initiative (EFI)
Deposit date:2011-03-25
Release date:2011-04-27
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Divergence of Structure and Function in the Haloacid Dehalogenase Enzyme Superfamily: Bacteroides thetaiotaomicron BT2127 Is an Inorganic Pyrophosphatase.
Biochemistry, 50, 2011
7LP6
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BU of 7lp6 by Molmil
X-ray radiation damage series on Lysozyme at 277K, multi-conformer model, dataset 2 (merged)
Descriptor: CHLORIDE ION, Lysozyme C, SODIUM ION
Authors:Yabukarski, F, Doukov, T, Herschlag, D.
Deposit date:2021-02-11
Release date:2022-02-23
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.13 Å)
Cite:Evaluating the impact of X-ray damage on conformational heterogeneity in room-temperature (277 K) and cryo-cooled protein crystals.
Acta Crystallogr D Struct Biol, 78, 2022
7LQ8
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BU of 7lq8 by Molmil
X-ray radiation damage series on Proteinase K at 277K, multi-conformer model, dataset 3
Descriptor: CALCIUM ION, Proteinase K, SULFATE ION
Authors:Yabukarski, F, Doukov, T, Herschlag, D.
Deposit date:2021-02-13
Release date:2022-02-23
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Evaluating the impact of X-ray damage on conformational heterogeneity in room-temperature (277 K) and cryo-cooled protein crystals.
Acta Crystallogr D Struct Biol, 78, 2022
3RCJ
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BU of 3rcj by Molmil
Rapid preparation of triazolyl substituted NH-heterocyclic kinase inhibitors via one-pot Sonogashira coupling TMS-deprotection CuAAC sequence
Descriptor: 3-(1-benzyl-1H-1,2,3-triazol-4-yl)-1H-pyrrolo[2,3-b]pyridine, 3-phosphoinositide-dependent protein kinase 1
Authors:Graedler, U, Dorsch, D, Merkul, E, Klukas, F, Sirrenberg, C, Greiner, H.E, Mueller, T.J.J.
Deposit date:2011-03-31
Release date:2011-06-15
Last modified:2012-12-05
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Rapid preparation of triazolyl substituted NH-heterocyclic kinase inhibitors via one-pot Sonogashira coupling-TMS-deprotection-CuAAC sequence.
Org.Biomol.Chem., 9, 2011
3RL6
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BU of 3rl6 by Molmil
Crystal structure of the archaeal asparagine synthetase A complexed with L-Asparagine and Adenosine monophosphate
Descriptor: ADENOSINE MONOPHOSPHATE, ASPARAGINE, Archaeal asparagine synthetase A, ...
Authors:Blaise, M, Frechin, M, Charron, C, Roy, H, Sauter, C, Lorber, B, Olieric, V, Kern, D.
Deposit date:2011-04-19
Release date:2011-08-17
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal Structure of the Archaeal Asparagine Synthetase: Interrelation with Aspartyl-tRNA and Asparaginyl-tRNA Synthetases.
J.Mol.Biol., 412, 2011
3RGR
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BU of 3rgr by Molmil
Crystal structure of ketosteroid isomerase M116A from Pseudomonas putida
Descriptor: Steroid Delta-isomerase
Authors:Gonzalez, A, Tsai, Y, Schwans, J, Sunden, F, Herschlag, D.
Deposit date:2011-04-08
Release date:2012-08-22
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.594 Å)
Cite:Crystal structure of ketosteroid isomerase M116A from Pseudomonas putida
To be Published
7LYU
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BU of 7lyu by Molmil
Reelin repeat 8
Descriptor: CALCIUM ION, Reelin, alpha-D-mannopyranose-(1-2)-alpha-D-mannopyranose-(1-3)-beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Turk, L.S, Comoletti, D.
Deposit date:2021-03-08
Release date:2022-06-15
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (3 Å)
Cite:Structure of Reelin repeat 8 and the adjacent C-terminal region.
Biophys.J., 121, 2022
7LTD
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BU of 7ltd by Molmil
X-ray radiation damage series on Proteinase K at 100K, crystal structure, dataset 1
Descriptor: CALCIUM ION, NITRATE ION, Proteinase K
Authors:Yabukarski, F, Doukov, T, Herschlag, D.
Deposit date:2021-02-19
Release date:2022-08-17
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (0.9 Å)
Cite:Evaluating the impact of X-ray damage on conformational heterogeneity in room-temperature (277 K) and cryo-cooled protein crystals.
Acta Crystallogr D Struct Biol, 78, 2022
7LTI
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BU of 7lti by Molmil
X-ray radiation damage series on Proteinase K at 100K, crystal structure, dataset 2
Descriptor: CALCIUM ION, NITRATE ION, Proteinase K
Authors:Yabukarski, F, Doukov, T, Herschlag, D.
Deposit date:2021-02-19
Release date:2022-08-17
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (0.91 Å)
Cite:Evaluating the impact of X-ray damage on conformational heterogeneity in room-temperature (277 K) and cryo-cooled protein crystals.
Acta Crystallogr D Struct Biol, 78, 2022
7LTV
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BU of 7ltv by Molmil
X-ray radiation damage series on Proteinase K at 100K, crystal structure, dataset 3
Descriptor: CALCIUM ION, NITRATE ION, Proteinase K
Authors:Yabukarski, F, Doukov, T, Herschlag, D.
Deposit date:2021-02-20
Release date:2022-08-17
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (0.95 Å)
Cite:Evaluating the impact of X-ray damage on conformational heterogeneity in room-temperature (277 K) and cryo-cooled protein crystals.
Acta Crystallogr D Struct Biol, 78, 2022

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