Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 22322 件

4LGL
DownloadVisualize
BU of 4lgl by Molmil
Crystal Structure of Glycine Decarboxylase P-protein from Synechocystis sp. PCC 6803, apo form
分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, CHLORIDE ION, Glycine dehydrogenase [decarboxylating]
著者Hasse, D, Andersson, E, Carlsson, G, Masloboy, A, Hagemann, M, Bauwe, H, Andersson, I.
登録日2013-06-28
公開日2013-10-16
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.0004 Å)
主引用文献Structure of the Homodimeric Glycine Decarboxylase P-protein from Synechocystis sp. PCC 6803 Suggests a Mechanism for Redox Regulation.
J.Biol.Chem., 288, 2013
4LHC
DownloadVisualize
BU of 4lhc by Molmil
Crystal structure of Synechocystis sp. PCC 6803 glycine decarboxylase (P-protein), holo form with pyridoxal-5'-phosphate and glycine
分子名称: 1,2-ETHANEDIOL, BICARBONATE ION, BICINE, ...
著者Hasse, D, Andersson, E, Carlsson, G, Masloboy, A, Hagemann, M, Bauwe, H, Andersson, I.
登録日2013-07-01
公開日2013-10-16
最終更新日2023-12-06
実験手法X-RAY DIFFRACTION (1.899 Å)
主引用文献Structure of the Homodimeric Glycine Decarboxylase P-protein from Synechocystis sp. PCC 6803 Suggests a Mechanism for Redox Regulation.
J.Biol.Chem., 288, 2013
4M1J
DownloadVisualize
BU of 4m1j by Molmil
Crystal structure of Pseudomonas aeruginosa PvdQ in complex with a transition state analogue
分子名称: Acyl-homoserine lactone acylase PvdQ subunit alpha, Acyl-homoserine lactone acylase PvdQ subunit beta, GLYCEROL, ...
著者Wu, R, Clevenger, K, Er, J, Fast, W.L, Liu, D.
登録日2013-08-02
公開日2013-08-28
最終更新日2017-11-15
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Rational Design of a Transition State Analogue with Picomolar Affinity for Pseudomonas aeruginosa PvdQ, a Siderophore Biosynthetic Enzyme.
Acs Chem.Biol., 8, 2013
4M4X
DownloadVisualize
BU of 4m4x by Molmil
Structure and Dimerization Properties of the Aryl Hydrocarbon Receptor (AHR) PAS-A Domain
分子名称: Aryl hydrocarbon receptor
著者Wu, D, Potluri, N, Kim, Y, Rastinejad, F.
登録日2013-08-07
公開日2013-09-18
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.551 Å)
主引用文献Structure and dimerization properties of the aryl hydrocarbon receptor PAS-A domain.
Mol.Cell.Biol., 33, 2013
4LX5
DownloadVisualize
BU of 4lx5 by Molmil
X-ray crystal structure of the M6" riboswitch aptamer bound to pyrimido[4,5-d]pyrimidine-2,4-diamine (PPDA)
分子名称: MAGNESIUM ION, Mutated adenine riboswitch aptamer, pyrimido[4,5-d]pyrimidine-2,4-diamine
著者Dunstan, M.S, Leys, D.
登録日2013-07-29
公開日2014-07-16
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.13 Å)
主引用文献Modular riboswitch toolsets for synthetic genetic control in diverse bacterial species.
J.Am.Chem.Soc., 136, 2014
4M6H
DownloadVisualize
BU of 4m6h by Molmil
Structure of the reduced, metal-free form of Mycobacterium tuberculosis peptidoglycan amidase Rv3717
分子名称: Peptidoglycan Amidase Rv3717
著者Prigozhin, D.M, Mavrici, D, Huizar, J.P, Vansell, H.J, Alber, T, TB Structural Genomics Consortium (TBSGC)
登録日2013-08-09
公開日2013-09-18
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.194 Å)
主引用文献Structural and Biochemical Analyses of Mycobacterium tuberculosis N-Acetylmuramyl-L-alanine Amidase Rv3717 Point to a Role in Peptidoglycan Fragment Recycling.
J.Biol.Chem., 288, 2013
4LBD
DownloadVisualize
BU of 4lbd by Molmil
LIGAND-BINDING DOMAIN OF THE HUMAN RETINOIC ACID RECEPTOR GAMMA BOUND TO THE SYNTHETIC AGONIST BMS961
分子名称: 3-FLUORO-4-[2-HYDROXY-2-(5,5,8,8-TETRAMETHYL-5,6,7,8,-TETRAHYDRO-NAPHTALEN-2-YL)-ACETYLAMINO]-BENZOIC ACID, RETINOIC ACID RECEPTOR GAMMA
著者Klaholz, B.P, Renaud, J.-P, Mitschler, A, Moras, D, Structural Proteomics in Europe (SPINE)
登録日1998-02-04
公開日1999-03-02
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Conformational adaptation of agonists to the human nuclear receptor RAR gamma.
Nat.Struct.Biol., 5, 1998
4M4R
DownloadVisualize
BU of 4m4r by Molmil
Epha4 ectodomain complex with ephrin a5
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Ephrin type-A receptor 4, ...
著者Xu, K, Tsvetkova-Robev, D, Xu, Y, Goldgur, Y, Chan, Y.-P, Himanen, J.P, Nikolov, D.B.
登録日2013-08-07
公開日2013-10-30
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (3.13 Å)
主引用文献Insights into Eph receptor tyrosine kinase activation from crystal structures of the EphA4 ectodomain and its complex with ephrin-A5.
Proc.Natl.Acad.Sci.USA, 110, 2013
4LNY
DownloadVisualize
BU of 4lny by Molmil
Crystal Structure of Engineered Protein, Northeast Structural Genomics Consortium Target OR422
分子名称: CADMIUM ION, CHLORIDE ION, Engineered Protein OR422
著者Vorobiev, S, Su, M, Bjelic, S, Kipnis, Y, Wang, L, Sahdev, S, Xiao, R, Maglaqui, M, Kogan, S, Baker, D, Everett, J.K, Acton, T.B, Montelione, G.T, Hunt, J.F, Tong, L, Northeast Structural Genomics Consortium (NESG)
登録日2013-07-12
公開日2013-08-07
最終更新日2023-12-06
実験手法X-RAY DIFFRACTION (1.929 Å)
主引用文献Crystal Structure of Engineered Protein OR422.
To be Published
4L7W
DownloadVisualize
BU of 4l7w by Molmil
Crystal structure mutant H77A of human HD domain-containing protein 2, Genomics Consortium (NESG) Target HR6723
分子名称: HD domain-containing protein 2, MAGNESIUM ION
著者Kuzin, A, Su, M, Yakunin, A, Beloglazova, N, Seetharaman, J, Maglaqui, M, Xiao, R, Lee, D, Brown, G, Flick, R, Everett, J.K, Acton, T.B, Montelione, G.T, Hunt, J.F, Tong, L, Northeast Structural Genomics Consortium (NESG)
登録日2013-06-14
公開日2013-07-03
最終更新日2023-12-06
実験手法X-RAY DIFFRACTION (2.305 Å)
主引用文献Northeast Structural Genomics Consortium Target HR6723
To be Published
4L9R
DownloadVisualize
BU of 4l9r by Molmil
Crystal Structure of apo A12K/D35S mutant myo-inositol dehydrogenase from Bacillus subtilis
分子名称: Inositol 2-dehydrogenase/D-chiro-inositol 3-dehydrogenase
著者Bertwistle, D, Sanders, D.A.R, Palmer, D.R.J.
登録日2013-06-18
公開日2013-09-04
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Converting NAD-Specific Inositol Dehydrogenase to an Efficient NADP-Selective Catalyst, with a Surprising Twist.
Biochemistry, 52, 2013
4L8V
DownloadVisualize
BU of 4l8v by Molmil
Crystal Structure of A12K/D35S mutant myo-inositol dehydrogenase from Bacillus subtilis with bound cofactor NADP
分子名称: 1,2-ETHANEDIOL, Inositol 2-dehydrogenase/D-chiro-inositol 3-dehydrogenase, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
著者Bertwistle, D, Sanders, D.A.R, Palmer, D.R.J.
登録日2013-06-18
公開日2013-09-04
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.09 Å)
主引用文献Converting NAD-Specific Inositol Dehydrogenase to an Efficient NADP-Selective Catalyst, with a Surprising Twist.
Biochemistry, 52, 2013
4JKY
DownloadVisualize
BU of 4jky by Molmil
Cobalt between two ADP's in the active site of adenylate kinase
分子名称: ADENOSINE-5'-DIPHOSPHATE, Adenylate kinase, COBALT (II) ION
著者Cho, Y.-J, Kern, D.
登録日2013-03-12
公開日2014-06-25
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.373 Å)
主引用文献The energy landscape of adenylate kinase during catalysis.
Nat.Struct.Mol.Biol., 22, 2015
4JLB
DownloadVisualize
BU of 4jlb by Molmil
Crystal Structures of Adenylate kinase with 2ADP's
分子名称: ADENOSINE-5'-DIPHOSPHATE, Adenylate kinase
著者Cho, Y.-J, Kern, D.
登録日2013-03-12
公開日2014-06-25
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.528 Å)
主引用文献The energy landscape of adenylate kinase during catalysis.
Nat.Struct.Mol.Biol., 22, 2015
4JZK
DownloadVisualize
BU of 4jzk by Molmil
Crystal Structure of Adenylate kinase of E. Coli with ADP/AMP bound
分子名称: ADENOSINE MONOPHOSPHATE, ADENOSINE-5'-DIPHOSPHATE, Adenylate kinase
著者Cho, Y.-J, Agafonov, R, Kern, D.
登録日2013-04-03
公開日2014-04-30
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.63 Å)
主引用文献Crystal structure of E. Coli Adenylate kinase with ADP and AMP bound
To be Published
4KAF
DownloadVisualize
BU of 4kaf by Molmil
Crystal Structure of Haloalkane dehalogenase HaloTag7 at the resolution 1.5A, Northeast Structural Genomics Consortium (NESG) Target OR151
分子名称: 1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER, Haloalkane dehalogenase, ...
著者Kuzin, A.P, Lew, S, Neklesa, T.K, Noblin, D, Seetharaman, J, Maglaqui, M, Xiao, R, Kohan, E, Wang, H, Everett, J.K, Acton, T.B, Kornhaber, G, Montelione, G.T, Crews, C, Tong, L, Northeast Structural Genomics Consortium (NESG)
登録日2013-04-22
公開日2013-06-05
最終更新日2023-12-06
実験手法X-RAY DIFFRACTION (1.496 Å)
主引用文献Northeast Structural Genomics Consortium Target OR151
To be Published
4L1J
DownloadVisualize
BU of 4l1j by Molmil
Three dimensional structure of mutant D143A of human HD domain-containing protein 2, Northeast Structural Genomics Consortium (NESG) Target HR6723
分子名称: 2-{2-[2-(2-{2-[2-(2-ETHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHOXY)-ETHOXY]-ETHOXY}-ETHANOL, DI(HYDROXYETHYL)ETHER, HD domain-containing protein 2, ...
著者Kuzin, A, Su, M, Yakunin, A, Beloglazova, O, Seetharaman, J, Maglaqui, M, Xiao, R, Lee, D, Brown, G, Flick, R, Everett, J.K, Acton, T.B, Montelione, G.T, Hunt, J.F, Tong, L, Northeast Structural Genomics Consortium (NESG)
登録日2013-06-03
公開日2013-06-19
最終更新日2023-12-06
実験手法X-RAY DIFFRACTION (1.824 Å)
主引用文献Three dimensional structure of mutant D143A of human HD domain-containing protein 2, Northeast Structural Genomics Consortium (NESG) Target HR6723
To be Published
4MLG
DownloadVisualize
BU of 4mlg by Molmil
Structure of RS223-Beta-xylosidase
分子名称: Beta-xylosidase, CALCIUM ION, SULFATE ION
著者Jordan, D, Braker, J, Wagschal, K, Lee, C, Dubrovska, I, Anderson, S, Wawrzak, Z.
登録日2013-09-06
公開日2014-09-17
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Structure of RS223-Beta-xylosidase
To be Published
4MSL
DownloadVisualize
BU of 4msl by Molmil
Crystal structure of the Vps10p domain of human sortilin/NTS3 in complex with AF40431
分子名称: N-[(7-hydroxy-4-methyl-2-oxo-2H-chromen-8-yl)methyl]-L-leucine, Sortilin, TETRAETHYLENE GLYCOL, ...
著者Andersen, J.L, Strandbygaard, D, Thirup, S.
登録日2013-09-18
公開日2014-02-12
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Identification of the first small-molecule ligand of the neuronal receptor sortilin and structure determination of the receptor-ligand complex.
Acta Crystallogr.,Sect.D, 70, 2014
4K8G
DownloadVisualize
BU of 4k8g by Molmil
Crystal structure of D-Mannonate dehydratase from Novosphingobium aromaticivorans mutant (V161A, R163A, K165G, L166A, Y167G, Y168A, E169G)
分子名称: GLYCEROL, MAGNESIUM ION, Mandelate racemase/muconate lactonizing enzyme, ...
著者Lukk, T, Wichelecki, D, Gerlt, J.A, Nair, S.K.
登録日2013-04-18
公開日2013-05-22
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.25 Å)
主引用文献Crystal structure of D-Mannonate dehydratase from Novosphingobium aromaticivorans mutant (V161A, R163A, K165G, L166A, Y167G, Y168A, E169G)
To be Published
4N7E
DownloadVisualize
BU of 4n7e by Molmil
Crystal structure of the Vps10p domain of human sortilin/NTS3 in complex with AF38469
分子名称: 2-[(6-methylpyridin-2-yl)carbamoyl]-5-(trifluoromethyl)benzoic acid, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Sortilin, ...
著者Andersen, J.L, Strandbygaard, D, Thirup, S.
登録日2013-10-15
公開日2014-01-22
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献The identification of AF38469: An orally bioavailable inhibitor of the VPS10P family sorting receptor Sortilin.
Bioorg.Med.Chem.Lett., 24, 2014
4N8O
DownloadVisualize
BU of 4n8o by Molmil
Crystal structure of Mycobacterial FtsX extracellular domain, bromide derivative
分子名称: BROMIDE ION, Cell division protein FtsX, POTASSIUM ION
著者Mavrici, D.
登録日2013-10-17
公開日2014-05-28
最終更新日2017-11-15
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Mycobacterium tuberculosis FtsX extracellular domain activates the peptidoglycan hydrolase, RipC.
Proc.Natl.Acad.Sci.USA, 111, 2014
4K1P
DownloadVisualize
BU of 4k1p by Molmil
Structure of the NheA component of the Nhe toxin from Bacillus cereus
分子名称: 1,2-ETHANEDIOL, NheA, SULFATE ION
著者Ganash, M, Phung, D, Artymiuk, P.J.
登録日2013-04-05
公開日2013-09-18
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献Structure of the NheA Component of the Nhe Toxin from Bacillus cereus: Implications for Function.
Plos One, 8, 2013
4LX6
DownloadVisualize
BU of 4lx6 by Molmil
X-ray crystal structure of the M6C" riboswitch aptamer bound to 2-aminopyrimido[4,5-d]pyrimidin-4(3H)-one (PPAO)
分子名称: 2-aminopyrimido[4,5-d]pyrimidin-4(3H)-one, MAGNESIUM ION, Mutated adenine riboswitch aptamer
著者Dunstan, M.S, Leys, D.
登録日2013-07-29
公開日2014-07-16
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献Modular riboswitch toolsets for synthetic genetic control in diverse bacterial species.
J.Am.Chem.Soc., 136, 2014
4M6I
DownloadVisualize
BU of 4m6i by Molmil
Structure of the reduced, Zn-bound form of Mycobacterium tuberculosis peptidoglycan amidase Rv3717
分子名称: Peptidoglycan Amidase Rv3717, ZINC ION
著者Prigozhin, D.M, Mavrici, D, Huizar, J.P, Vansell, H.J, Alber, T, TB Structural Genomics Consortium (TBSGC)
登録日2013-08-09
公開日2013-09-18
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.666 Å)
主引用文献Structural and Biochemical Analyses of Mycobacterium tuberculosis N-Acetylmuramyl-L-alanine Amidase Rv3717 Point to a Role in Peptidoglycan Fragment Recycling.
J.Biol.Chem., 288, 2013

224004

件を2024-08-21に公開中

PDB statisticsPDBj update infoContact PDBjnumon