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PDB: 22297 件

5UHV
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wild-type NRas bound to GppNHp
分子名称: GLYCEROL, GTPase NRas, MAGNESIUM ION, ...
著者Reid, D, Johnson, C, Salter, S, Mattos, C.
登録日2017-01-12
公開日2017-06-28
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.672 Å)
主引用文献The small GTPases K-Ras, N-Ras, and H-Ras have distinct biochemical properties determined by allosteric effects.
J. Biol. Chem., 292, 2017
2JYE
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BU of 2jye by Molmil
Human Granulin A
分子名称: Granulin A
著者Tolkatchev, D, Wang, P, Chen, Z, Xu, P, Ni, F.
登録日2007-12-13
公開日2008-04-22
最終更新日2022-03-16
実験手法SOLUTION NMR
主引用文献Structure dissection of human progranulin identifies well-folded granulin/epithelin modules with unique functional activities.
Protein Sci., 17, 2008
3DJW
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The thermo- and acido-stable ORF-99 from the archaeal virus AFV1
分子名称: ORF99
著者Goulet, A, Spinelli, S, Prangishvili, D, van Tilbeurgh, H, Cambillau, C, Campanacci, V.
登録日2008-06-24
公開日2009-06-16
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (3.1 Å)
主引用文献The thermo- and acido-stable ORF-99 from the archaeal virus AFV1
Protein Sci., 18, 2009
5U9S
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Ocellatin-F1, solution structure in TFE by NMR spectroscopy
分子名称: Ocellatin-F1
著者Gusmao, K.A.G, dos Santos, D.M, Santos, V.M, Pilo-Veloso, D, de Lima, M.E, Resende, J.M.
登録日2016-12-18
公開日2017-03-29
実験手法SOLUTION NMR
主引用文献Ocellatin-F1
To Be Published
5U9Y
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Ocellatin-F1
分子名称: Ocellatin-K1
著者Gusmao, K.A.G, dos Santos, D.M, Santos, V.M, Pilo-Veloso, D, de Lima, M.E, Resende, J.M.
登録日2016-12-18
公開日2017-03-01
最終更新日2018-04-18
実験手法SOLUTION NMR
主引用文献NMR structures in different membrane environments of three ocellatin peptides isolated from Leptodactylus labyrinthicus.
Peptides, 103, 2018
2K0T
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BU of 2k0t by Molmil
High Resolution Solution NMR Structures of Oxaliplatin-DNA Adduct
分子名称: CYCLOHEXANE-1(R),2(R)-DIAMINE-PLATINUM(II), DNA (5'-D(*DCP*DCP*DTP*DCP*DTP*DGP*DGP*DTP*DCP*DTP*DCP*DC)-3'), DNA (5'-D(*DGP*DGP*DAP*DGP*DAP*DCP*DCP*DAP*DGP*DAP*DGP*DG)-3')
著者Bhattacharyya, D, King, C.L, Chaney, S.G, Campbell, S.L.
登録日2008-02-14
公開日2009-02-03
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献Flanking Bases Influence the Nature of DNA Distortion by Platinum 1,2-Intrastrand (GG) Cross-Links.
Plos One, 6, 2011
3ZTF
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BU of 3ztf by Molmil
X-ray Structure of the Cyan Fluorescent Protein mTurquoise2 (K206A mutant)
分子名称: GREEN FLUORESCENT PROTEIN
著者von Stetten, D, Goedhart, J, Noirclerc-Savoye, M, Lelimousin, M, Joosen, L, Hink, M.A, van Weeren, L, Gadella, T.W.J, Royant, A.
登録日2011-07-07
公開日2012-03-21
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (1.31 Å)
主引用文献Structure-Guided Evolution of Cyan Fluorescent Proteins Towards a Quantum Yield of 93%
Nat.Commun, 3, 2012
3SB8
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Cu-mediated Dimer of T4 Lysozyme D61H/K65H by Synthetic Symmetrization
分子名称: COPPER (II) ION, Lysozyme
著者Soriaga, A.B, Laganowsky, A, Zhao, M, Sawaya, M.R, Cascio, D, Yeates, T.O.
登録日2011-06-03
公開日2011-09-21
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.65 Å)
主引用文献An approach to crystallizing proteins by metal-mediated synthetic symmetrization.
Protein Sci., 20, 2011
5UD5
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BU of 5ud5 by Molmil
Crystal structure of the tRNA binding domain of Pyrrolysyl-tRNA synthetase bound to tRNA(Pyl)
分子名称: Pyrrolysine--tRNA ligase, RNA (70-MER), ZINC ION
著者Suzuki, T, Soll, D.
登録日2016-12-23
公開日2017-10-11
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (2.347 Å)
主引用文献Crystal structures reveal an elusive functional domain of pyrrolysyl-tRNA synthetase.
Nat. Chem. Biol., 13, 2017
3WFQ
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BU of 3wfq by Molmil
tRNA processing enzyme complex 1
分子名称: Poly A polymerase, RNA (73-MER)
著者Yamashita, S, Takeshita, D, Tomita, K.
登録日2013-07-23
公開日2014-01-01
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (3.619 Å)
主引用文献Translocation and rotation of tRNA during template-independent RNA polymerization by tRNA nucleotidyltransferase
Structure, 22, 2014
3DRI
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BU of 3dri by Molmil
Crystal structure of Lactococcal OppA co-crystallized with an octamer peptide in an open conformation
分子名称: Oligopeptide-binding protein oppA, peptide AASASA
著者Berntsson, R.P.-A, Doeven, M.K, Duurkens, R.H, Sengupta, D, Marrink, S.-J, Thunnissen, A.-M, Poolman, B, Slotboom, D.-J.
登録日2008-07-11
公開日2009-03-31
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献The structural basis for peptide selection by the transport receptor OppA
Embo J., 28, 2009
7ZNP
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BU of 7znp by Molmil
Structure of AmedSP
分子名称: CHLORIDE ION, MAGNESIUM ION, Sucrose phosphorylase
著者Fredslund, F, Teze, D, Welner, D.H.
登録日2022-04-21
公開日2023-05-10
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献Structure of AmedSP
To Be Published
2K47
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Solution structure of the C-terminal N-RNA binding domain of the Vesicular Stomatitis Virus Phosphoprotein
分子名称: Phosphoprotein
著者Ribeiro, E.A, Favier, A, Gerard, F.C, Leyrat, C, Brutscher, B, Blondel, D, Ruigrok, R.W, Blackledge, M, Jamin, M.
登録日2008-05-28
公開日2008-09-09
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Solution Structure of the C-Terminal Nucleoprotein-RNA Binding Domain of the Vesicular Stomatitis Virus Phosphoprotein.
J.Mol.Biol., 2008
2K2Z
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Solution structure of the folded domain of intermediate IIIb of Tick Carboxypeptidase Inhibitor
分子名称: Carboxypeptidase inhibitor
著者Pantoja-Uceda, D, Blanco, F.
登録日2008-04-15
公開日2009-01-27
最終更新日2023-06-14
実験手法SOLUTION NMR
主引用文献The NMR structures of the major intermediates of the two-domain tick carboxypeptidase inhibitor reveal symmetry in its folding and unfolding pathways.
J.Biol.Chem., 283, 2008
3SEY
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BU of 3sey by Molmil
Zn-mediated Polymer of Maltose-binding Protein A216H/K220H by Synthetic Symmetrization (Form II)
分子名称: ACETATE ION, GLYCEROL, Maltose-binding periplasmic protein, ...
著者Zhao, M, Soriaga, A.B, Laganowsky, A, Sawaya, M.R, Cascio, D, Yeates, T.O.
登録日2011-06-11
公開日2011-09-21
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献An approach to crystallizing proteins by metal-mediated synthetic symmetrization.
Protein Sci., 20, 2011
3SER
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BU of 3ser by Molmil
Zn-mediated Polymer of Maltose-binding Protein K26H/K30H by Synthetic Symmetrization
分子名称: CALCIUM ION, CHLORIDE ION, Maltose-binding periplasmic protein, ...
著者Zhao, M, Soriaga, A.B, Laganowsky, A, Sawaya, M.R, Cascio, D, Yeates, T.O.
登録日2011-06-11
公開日2011-09-21
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.35 Å)
主引用文献An approach to crystallizing proteins by metal-mediated synthetic symmetrization.
Protein Sci., 20, 2011
3WMU
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BU of 3wmu by Molmil
The structure of an anti-cancer lectin mytilec apo-form from the mussel Mytilus galloprovincialis
分子名称: GLYCEROL, Lectin
著者Terada, D, Kawai, F, Noguchi, H, Unzai, S, Park, S.-Y, Ozeki, Y, Tame, J.R.H.
登録日2013-11-27
公開日2014-12-03
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.1 Å)
主引用文献Crystal structure of MytiLec, a galactose-binding lectin from the mussel Mytilus galloprovincialis with cytotoxicity against certain cancer cell types
Sci Rep, 6, 2016
2JUB
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BU of 2jub by Molmil
Solution structure of IPI*
分子名称: Internal protein I
著者Rifat, D, Wright, N.T, Varney, K.M, Weber, D.J, Black, L.W.
登録日2007-08-17
公開日2007-12-11
最終更新日2024-05-08
実験手法SOLUTION NMR
主引用文献Restriction endonuclease inhibitor IPI* of bacteriophage T4: a novel structure for a dedicated target.
J.Mol.Biol., 375, 2008
3WPM
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BU of 3wpm by Molmil
Crystal structure of the anaerobic DesB-gallate complex by co-crystallization
分子名称: 3,4,5-trihydroxybenzoic acid, FE (III) ION, Gallate dioxygenase
著者Sugimoto, K, Senda, M, Kasai, D, Fukuda, M, Masai, E, Senda, T.
登録日2014-01-14
公開日2014-04-30
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Molecular Mechanism of Strict Substrate Specificity of an Extradiol Dioxygenase, DesB, Derived from Sphingobium sp. SYK-6
Plos One, 9, 2014
3WPP
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BU of 3wpp by Molmil
Acinetobacter sp. Tol 5 AtaA YDD-DALL3 domains in C-terminal stalk fused to GCN4 adaptors (CstalkC1iii)
分子名称: CHLORIDE ION, Trimeric autotransporter adhesin
著者Koiwai, K, Hartmann, M.D, Yoshimoto, S, Nur 'Izzah, N, Suzuki, A, Linke, D, Lupas, A.N, Hori, K.
登録日2014-01-15
公開日2015-03-04
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.952 Å)
主引用文献Structural Basis for Toughness and Flexibility in the C-terminal Passenger Domain of an Acinetobacter Trimeric Autotransporter Adhesin.
J.Biol.Chem., 291, 2016
7ZXA
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BU of 7zxa by Molmil
Crystal structure of human cathepsin L with covalently bound aloxistatin (E-64D)
分子名称: 1,2-ETHANEDIOL, Cathepsin L, DI(HYDROXYETHYL)ETHER, ...
著者Falke, S, Lieske, J, Guenther, S, Reinke, P.Y.A, Ewert, W, Loboda, J, Karnicar, K, Usenik, A, Lindic, N, Sekirnik, A, Chapman, H.N, Hinrichs, W, Turk, D, Meents, A.
登録日2022-05-20
公開日2023-05-31
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Structural Elucidation and Antiviral Activity of Covalent Cathepsin L Inhibitors.
J.Med.Chem., 67, 2024
3WR4
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Crystal structure of the anaerobic DesB-gallate complex
分子名称: 3,4,5-trihydroxybenzoic acid, FE (III) ION, Gallate dioxygenase
著者Sugimoto, K, Senda, M, Kasai, D, Fukuda, M, Masai, E, Senda, T.
登録日2014-02-13
公開日2014-04-30
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Molecular Mechanism of Strict Substrate Specificity of an Extradiol Dioxygenase, DesB, Derived from Sphingobium sp. SYK-6
Plos One, 9, 2014
5UJ0
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BU of 5uj0 by Molmil
Structure of T4Pnkp 3' phosphatase covalently bound to BeF3
分子名称: GLYCEROL, MAGNESIUM ION, Polynucleotide kinase
著者Shuman, S, Chatterjee, D.
登録日2017-01-16
公開日2017-02-08
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Truncated T4Pnk covalently bound to BeF3
To Be Published
5UL6
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The molecular mechanisms by which NS1 of the 1918 Spanish influenza A virus hijack host protein-protein interactions
分子名称: Adapter molecule crk, Proline-rich motif of nonstructural protein 1 of influenza a virus
著者Shen, Q, Zeng, D, Zhao, B, Li, P, Cho, J.H.
登録日2017-01-24
公開日2017-08-09
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.45 Å)
主引用文献The Molecular Mechanisms Underlying the Hijack of Host Proteins by the 1918 Spanish Influenza Virus.
ACS Chem. Biol., 12, 2017
2JVA
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BU of 2jva by Molmil
NMR solution structure of peptidyl-tRNA hydrolase domain protein from Pseudomonas syringae pv. tomato. Northeast Structural Genomics Consortium target PsR211
分子名称: Peptidyl-tRNA hydrolase domain protein
著者Singarapu, K.K, Sukumaran, D, Parish, D, Eletsky, A, Zhang, Q, Zhao, L, Jiang, M, Maglaqui, M, Xiao, R, Liu, J, Baran, M.C, Swapna, G.V.T, Huang, Y.J, Acton, T.B, Rost, B, Montelione, G.T, Szyperski, T, Northeast Structural Genomics Consortium (NESG)
登録日2007-09-14
公開日2007-10-02
最終更新日2024-05-08
実験手法SOLUTION NMR
主引用文献NMR structure of the peptidyl-tRNA hydrolase domain from Pseudomonas syringae expands the structural coverage of the hydrolysis domains of class 1 peptide chain release factors.
Proteins, 71, 2008

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