Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 22297 件

3VCH
DownloadVisualize
BU of 3vch by Molmil
Thaumatin by Classical Hanging Drop Vapour Diffusion after 9.05 MGy X-Ray dose at ESRF ID29 beamline (Best Case)
分子名称: GLYCEROL, Thaumatin I
著者Belmonte, L, Pechkova, E, Scudieri, D, Nicolini, C.
登録日2012-01-04
公開日2012-11-21
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Langmuir-blodgett nanotemplate and radiation resistance in protein crystals: state of the art.
Crit Rev Eukaryot Gene Expr, 22, 2012
2IGV
DownloadVisualize
BU of 2igv by Molmil
CYCLOPHILIN 3 Complexed with DIPEPTIDE SER-PRO
分子名称: PROLINE, Peptidyl-prolyl cis-trans isomerase 3, SERINE
著者Kan, D.
登録日2006-09-25
公開日2007-08-14
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.67 Å)
主引用文献Experimental Determination of van der Waals Energies in a Biological System.
Angew.Chem.Int.Ed.Engl., 46, 2007
3VCP
DownloadVisualize
BU of 3vcp by Molmil
The 2.2 Angstrom structure of Stc2 with proline bound in the active site
分子名称: FE (III) ION, FE2/S2 (INORGANIC) CLUSTER, PROLINE, ...
著者Daughtry, K.D, Xiao, Y, Stoner-Ma, D, Cho, E, Orville, A.M, Liu, P, Allen, K.N.
登録日2012-01-04
公開日2012-02-08
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Quaternary Ammonium Oxidative Demethylation: X-ray Crystallographic, Resonance Raman, and UV-Visible Spectroscopic Analysis of a Rieske-Type Demethylase.
J.Am.Chem.Soc., 134, 2012
3RWQ
DownloadVisualize
BU of 3rwq by Molmil
Discovery of a Novel, Potent and Selective Inhibitor of 3-Phosphoinositide Dependent Kinase (PDK1)
分子名称: 3-phosphoinositide-dependent protein kinase 1, GLYCEROL, SULFATE ION, ...
著者Kazmirski, S, Kohls, D.
登録日2011-05-09
公開日2011-11-16
最終更新日2011-12-28
実験手法X-RAY DIFFRACTION (2.55 Å)
主引用文献Discovery of Novel, Potent, and Selective Inhibitors of 3-Phosphoinositide-Dependent Kinase (PDK1).
J.Med.Chem., 54, 2011
3S2K
DownloadVisualize
BU of 3s2k by Molmil
Structural basis of Wnt signaling inhibition by Dickkopf binding to LRP5/6.
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Ahn, V.E, Chu, M.L.-H, Choi, H.-J, Tran, D, Abo, A, Weis, W.I.
登録日2011-05-16
公開日2011-11-02
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Structural Basis of Wnt Signaling Inhibition by Dickkopf Binding to LRP5/6.
Dev.Cell, 21, 2011
7YPM
DownloadVisualize
BU of 7ypm by Molmil
Crystal structure of transaminase CC1012 complexed with PLP and L-alanine
分子名称: 1,2-ETHANEDIOL, ALANINE, Aspartate aminotransferase family protein, ...
著者Yang, L, Wang, H, Wei, D.
登録日2022-08-03
公開日2023-05-24
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.984 Å)
主引用文献Mechanism-Guided Computational Design of omega-Transaminase by Reprograming of High-Energy-Barrier Steps.
Angew.Chem.Int.Ed.Engl., 61, 2022
3FKU
DownloadVisualize
BU of 3fku by Molmil
Crystal structure of influenza hemagglutinin (H5) in complex with a broadly neutralizing antibody F10
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Hemagglutinin, Neutralizing antibody F10, ...
著者Hwang, W.C, Santelli, E, Stec, B, Wei, G, Cadwell, G, Bankston, L.A, Sui, J, Perez, S, Aird, D, Chen, L.M, Ali, M, Murakami, A, Yammanuru, A, Han, T, Cox, N, Donis, R.O, Liddington, R.C, Marasco, W.A.
登録日2008-12-17
公開日2009-02-24
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献Structural and functional bases for broad-spectrum neutralization of avian and human influenza A viruses.
Nat.Struct.Mol.Biol., 16, 2009
3S3X
DownloadVisualize
BU of 3s3x by Molmil
Structure of chicken acid-sensing ion channel 1 AT 3.0 A resolution in complex with psalmotoxin
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Amiloride-sensitive cation channel 2, neuronal, ...
著者Dawson, R.J.P, Benz, J, Stohler, P, Tetaz, T, Joseph, C, Huber, S, Schmid, G, Huegin, D, Pflimlin, P, Trube, G, Rudolph, M.G, Hennig, M, Ruf, A.
登録日2011-05-18
公開日2012-05-23
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.99 Å)
主引用文献Structure of the Acid-sensing ion channel 1 in complex with the gating modifier Psalmotoxin 1.
Nat Commun, 3, 2012
2IJ7
DownloadVisualize
BU of 2ij7 by Molmil
Structure of Mycobacterium tuberculosis CYP121 in complex with the antifungal drug fluconazole
分子名称: 2-(2,4-DIFLUOROPHENYL)-1,3-DI(1H-1,2,4-TRIAZOL-1-YL)PROPAN-2-OL, Cytochrome P450 121, PROTOPORPHYRIN IX CONTAINING FE
著者Roujeinikova, A, Leys, D.
登録日2006-09-29
公開日2006-11-07
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Crystal structure of the Mycobacterium tuberculosis P450 CYP121-fluconazole complex reveals new azole drug-P450 binding mode.
J.Biol.Chem., 281, 2006
5TP3
DownloadVisualize
BU of 5tp3 by Molmil
Crystal structure of the RSV-neutralizing single-domain antibody F-VHH-4
分子名称: F-VHH-4
著者Wrapp, D, Gilman, M.S.A, McLellan, J.S.
登録日2016-10-19
公開日2017-02-22
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.874 Å)
主引用文献Potent single-domain antibodies that arrest respiratory syncytial virus fusion protein in its prefusion state.
Nat Commun, 8, 2017
7ZBS
DownloadVisualize
BU of 7zbs by Molmil
Solution NMR structure of the HTH_8cm consensus miniprotein in 30% TFE at 278K
分子名称: HTH_8cm
著者Socha, O, Jakubec, D.
登録日2022-03-24
公開日2022-04-06
最終更新日2024-06-19
実験手法SOLUTION NMR
主引用文献Consensus design of structured miniproteins using spectral analysis of domain residue interaction networks
To Be Published
7YWR
DownloadVisualize
BU of 7ywr by Molmil
NMR structure of the N-terminal domain of Nsp8 from SARS-CoV-2
分子名称: ORF1a polyprotein
著者Mompean, M, Laurents, D.V, Pantoja-Uceda, D, Trevino, M.A.
登録日2022-02-14
公開日2022-03-02
最終更新日2024-06-19
実験手法SOLUTION NMR
主引用文献NMR structure of the N-terminal domain of Nsp8 from SARS-CoV-2
To Be Published
5TQA
DownloadVisualize
BU of 5tqa by Molmil
Crystal Structure of DH270.6 (unliganded) from the DH270 Broadly Neutralizing N332-Glycan Dependent Lineage
分子名称: DH270.6 Fab heavy chain, DH270.6 Fab light chain
著者Fera, D, Harrison, S.C.
登録日2016-10-23
公開日2017-03-15
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.723 Å)
主引用文献Staged induction of HIV-1 glycan-dependent broadly neutralizing antibodies.
Sci Transl Med, 9, 2017
3EW7
DownloadVisualize
BU of 3ew7 by Molmil
Crystal structure of the Lmo0794 protein from Listeria monocytogenes. Northeast Structural Genomics Consortium target LmR162.
分子名称: Lmo0794 protein
著者Vorobiev, S.M, Abashidze, M, Seetharaman, J, Wang, D, Foote, E.L, Ciccosanti, C, Janjua, H, Xiao, R, Acton, T.B, Montelione, G.T, Tong, L, Hunt, J.F, Northeast Structural Genomics Consortium (NESG)
登録日2008-10-14
公開日2008-11-11
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.73 Å)
主引用文献Crystal structure of the Lmo0794 protein from Listeria monocytogenes.
To be Published
3F2Z
DownloadVisualize
BU of 3f2z by Molmil
Crystal structure of the C-terminal domain of a chitobiase (BF3579) from Bacteroides fragilis, Northeast Structural Genomics Consortium Target BfR260B
分子名称: uncharacterized protein BF3579
著者Forouhar, F, Lew, S, Seetharaman, J, Janjua, H, Xiao, R, Foote, E.L, Ciccosanti, C, Lee, D, Nair, R, Everett, J.K, Acton, T.B, Rost, B, Montelione, G.T, Hunt, J.F, Tong, L, Northeast Structural Genomics Consortium (NESG)
登録日2008-10-30
公開日2008-11-18
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (1.3 Å)
主引用文献Crystal structure of the C-terminal domain of a chitobiase (BF3579) from Bacteroides fragilis, Northeast Structural Genomics Consortium Target BfR260B
To be Published
5TSB
DownloadVisualize
BU of 5tsb by Molmil
Crystal structure of the Zrt-/Irt-like protein from Bordetella bronchiseptica with bound Cd2+
分子名称: CADMIUM ION, Membrane protein
著者Zhang, T, Fellner, M, Sui, D, Liu, J, Hu, J.
登録日2016-10-28
公開日2017-09-20
最終更新日2020-01-01
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Crystal structures of a ZIP zinc transporter reveal a binuclear metal center in the transport pathway.
Sci Adv, 3, 2017
7YM9
DownloadVisualize
BU of 7ym9 by Molmil
Crystal structure of a PET hydrolase from Cryptosporangium aurantiacum
分子名称: MALONATE ION, Poly(ethylene terephthalate) hydrolase
著者Hong, H, Ki, D, Kim, K.-J.
登録日2022-07-28
公開日2023-07-12
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.34 Å)
主引用文献Discovery and rational engineering of PET hydrolase with both mesophilic and thermophilic PET hydrolase properties.
Nat Commun, 14, 2023
2IPR
DownloadVisualize
BU of 2ipr by Molmil
Origin binding domain of the SV40 large T antigen (residues 131-259). P21 crystal form
分子名称: large T antigen
著者Martynowski, D, Bochkareva, E, Bochkarev, A.
登録日2006-10-12
公開日2006-12-12
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Structure of the origin-binding domain of simian virus 40 large T antigen bound to DNA
Embo J., 25, 2006
3SB7
DownloadVisualize
BU of 3sb7 by Molmil
Cu-mediated Trimer of T4 Lysozyme D61H/K65H/R76H/R80H by Synthetic Symmetrization
分子名称: COPPER (II) ION, GLYCEROL, Lysozyme
著者Soriaga, A.B, Laganowsky, A, Zhao, M, Sawaya, M.R, Cascio, D, Yeates, T.O.
登録日2011-06-03
公開日2011-09-21
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献An approach to crystallizing proteins by metal-mediated synthetic symmetrization.
Protein Sci., 20, 2011
5TRP
DownloadVisualize
BU of 5trp by Molmil
Crystal Structure of the Unliganded DH270 Cooperating Lineage Member DH272
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, DH272 Fab heavy chain, DH272 Fab light chain, ...
著者Fera, D, Harrison, S.C.
登録日2016-10-27
公開日2017-03-15
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.692 Å)
主引用文献Staged induction of HIV-1 glycan-dependent broadly neutralizing antibodies.
Sci Transl Med, 9, 2017
7YME
DownloadVisualize
BU of 7yme by Molmil
Crystal structure of a PET hydrolase M9 variant from Cryptosporangium aurantiacum
分子名称: Poly(Ethylene terephthalate) hydrolase
著者Ki, D, Hong, H, Kim, K.-J.
登録日2022-07-28
公開日2023-07-12
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Discovery and rational engineering of PET hydrolase with both mesophilic and thermophilic PET hydrolase properties.
Nat Commun, 14, 2023
7KCU
DownloadVisualize
BU of 7kcu by Molmil
Joint neutron/X-ray structure of Oxyferrous Dehaloperoxidase B
分子名称: Dehaloperoxidase B, OXYGEN MOLECULE, PROTOPORPHYRIN IX CONTAINING FE, ...
著者Carey, L.M, Ghiladi, R.A, Meilleur, F, Myles, D.
登録日2020-10-07
公開日2021-10-13
最終更新日2023-10-25
実験手法NEUTRON DIFFRACTION (2.2 Å), X-RAY DIFFRACTION
主引用文献Complementarity of neutron, XFEL and synchrotron crystallography for defining the structures of metalloenzymes at room temperature.
Iucrj, 9, 2022
5TSJ
DownloadVisualize
BU of 5tsj by Molmil
Thermus thermophilus V/A-ATPase bound to VH dAbs
分子名称: Archaeal/vacuolar-type H+-ATPase subunit I, Human heavy chain domain antibody, V-type ATP synthase alpha chain, ...
著者Davies, R.B, Smits, C, Wong, A.S.W, Stock, D, Sandin, S, Stewart, A.G.
登録日2016-10-29
公開日2017-02-01
最終更新日2024-03-13
実験手法ELECTRON MICROSCOPY (8.7 Å)
主引用文献Cryo-EM analysis of a domain antibody bound rotary ATPase complex.
J. Struct. Biol., 197, 2017
3W0Q
DownloadVisualize
BU of 3w0q by Molmil
Crystal structure of a thermostable mutant of aminoglycoside phosphotransferase APH(4)-Ia (N203A), ternary complex with AMP-PNP and hygromycin B
分子名称: HYGROMYCIN B VARIANT, Hygromycin-B 4-O-kinase, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER
著者Iino, D, Takakura, Y, Fukano, K, Sasaki, Y, Hoshino, T, Ohsawa, K, Nakamura, A, Yajima, S.
登録日2012-11-02
公開日2013-08-07
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Crystal structures of the ternary complex of APH(4)-Ia/Hph with hygromycin B and an ATP analog using a thermostable mutant.
J.Struct.Biol., 183, 2013
7YNQ
DownloadVisualize
BU of 7ynq by Molmil
PiB-bound alpha-synuclein fibrils conformation 2
分子名称: 2-[4-(methylamino)phenyl]-1,3-benzothiazol-6-ol, Alpha-synuclein
著者Tao, Y.Q, Zhao, Q.Y, Liu, C, Li, D.
登録日2022-07-31
公開日2023-08-02
最終更新日2024-07-03
実験手法ELECTRON MICROSCOPY (2.8 Å)
主引用文献PiB-bound alpha-synuclein fibrils conformation 2
To Be Published

223790

件を2024-08-14に公開中

PDB statisticsPDBj update infoContact PDBjnumon