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PDB: 15 results

4WO2
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CRYSTAL STRUCTURE OF HUMAN NATIVE CKIT PROTO-ONCOGENE PROMOTER QUADRUPLEX DNA
Descriptor: DNA (5'-D(*AP*GP*GP*GP*AP*GP*GP*GP*CP*GP*CP*TP*GP*GP*GP*AP*GP*GP*AP*GP*GP*G)-3'), POTASSIUM ION
Authors:wei, D, parkinson, g.n, neidle, s.
Deposit date:2014-10-15
Release date:2014-10-22
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.82 Å)
Cite:CRYSTAL STRUCTURE OF HUMAN NATIVE CKIT-1 PROTO-ONCOGENE PROMOTER QUADRUPLEX DNA
TO BE PUBLISHED
4WO3
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THE SECOND C-KIT DNA QUADRUPLEX CRYSTAL STRUCTURE
Descriptor: DNA (5'-D(*AP*GP*GP*GP*AP*GP*GP*GP*CP*GP*CP*TP*GP*GP*GP*AP*GP*GP*AP*GP*GP*G)-3'), POTASSIUM ION
Authors:Wei, D, Neidle, S.
Deposit date:2014-10-15
Release date:2014-10-29
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.73 Å)
Cite:THE SECOND C-KIT1 DNA QUADRUPLEX CRYSTAL STRUCTURE
TO BE PUBLISHED
2JTU
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NMR structure of iota-RXIA(38)
Descriptor: I-superfamily conotoxin r11a
Authors:Wei, D, Norton, R.
Deposit date:2007-08-06
Release date:2008-08-19
Last modified:2022-03-16
Method:SOLUTION NMR
Cite:NMR structure of iota-RXIA(38)
To be Published
3QXR
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Crystal structure of the brominated CKIT-1 proto-oncogene promoter quadruplex DNA
Descriptor: 5'-D(*AP*GP*GP*GP*AP*GP*GP*GP*CP*GP*CP*(BRU)P*GP*GP*GP*AP*GP*GP*AP*GP*GP*G)-3', MAGNESIUM ION, POTASSIUM ION
Authors:Wei, D, Parkinson, G.N, Neidle, S.
Deposit date:2011-03-02
Release date:2012-01-18
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.62 Å)
Cite:Crystal structure of a c-kit promoter quadruplex reveals the structural role of metal ions and water molecules in maintaining loop conformation.
Nucleic Acids Res., 40, 2012
4H29
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B-raf dimer DNA quadruplex
Descriptor: DNA (5'-D(*GP*GP*GP*CP*GP*GP*GP*GP*AP*GP*GP*GP*GP*GP*AP*AP*GP*GP*GP*A)-3'), POTASSIUM ION
Authors:Wei, D, Parkinson, G, Neidle, S.
Deposit date:2012-09-12
Release date:2013-07-31
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.991 Å)
Cite:Crystal Structure of a Promoter Sequence in the B-raf Gene Reveals an Intertwined Dimer Quadruplex.
J.Am.Chem.Soc., 135, 2013
1A6X
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STRUCTURE OF THE APO-BIOTIN CARBOXYL CARRIER PROTEIN (APO-BCCP87) OF ESCHERICHIA COLI ACETYL-COA CARBOXYLASE, NMR, 49 STRUCTURES
Descriptor: APO-BIOTIN CARBOXYL CARRIER PROTEIN OF ACETYL-COA CARBOXYLASE
Authors:Yao, X, Wei, D, Soden Junior, C, Summers, M.F, Beckett, D.
Deposit date:1998-03-04
Release date:1998-10-14
Last modified:2022-02-16
Method:SOLUTION NMR
Cite:Structure of the carboxy-terminal fragment of the apo-biotin carboxyl carrier subunit of Escherichia coli acetyl-CoA carboxylase.
Biochemistry, 36, 1997
2JRY
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Structure and Sodium Channel Activity of an Excitatory I1-Superfamily Conotoxin
Descriptor: I-superfamily conotoxin r11a
Authors:Buczek, O, Wei, D, Babon, J, Yang, X, Fiedler, B, Chen, P, Yoshikami, D, Olivera, B, Bulaj, G, Norton, R.
Deposit date:2007-06-29
Release date:2007-10-23
Last modified:2022-03-09
Method:SOLUTION NMR
Cite:Structure and sodium channel activity of an excitatory I1-superfamily conotoxin.
Biochemistry, 46, 2007
4EHR
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Crystal structure of Bcl-Xl complex with 4-(5-butyl-3-(hydroxymethyl)-1-phenyl-1h-pyrazol-4-yl)-3-(3,4-dihydro-2(1h)-isoquinolinylcarbonyl)-n-((2-(trimethylsilyl)ethyl)sulfonyl)benzamide
Descriptor: 4-[5-butyl-3-(hydroxymethyl)-1-phenyl-1H-pyrazol-4-yl]-3-(3,4-dihydroisoquinolin-2(1H)-ylcarbonyl)-N-{[2-(trimethylsilyl)ethyl]sulfonyl}benzamide, Bcl-2-like protein 1, IMIDAZOLE
Authors:Schroeder, G.M, Wei, D, Banfi, P, Cai, Z, Lippy, J, Menichincheri, M, Modugno, M, Naglich, J, Penhallow, B, Perez, H.L, Sack, J, Schmidt, R.J, Tebben, A, Yan, C, Zhang, L, Galvani, A, Lombardo, L.J, Borzilleri, R.M.
Deposit date:2012-04-03
Release date:2012-06-06
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.09 Å)
Cite:Pyrazole and pyrimidine phenylacylsulfonamides as dual Bcl-2/Bcl-xL antagonists.
Bioorg.Med.Chem.Lett., 22, 2012
1WM7
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Solution Structure of BmP01 from the Venom of Scorpion Buthus martensii Karsch, 9 structures
Descriptor: Neurotoxin BmP01
Authors:Wu, G, Li, Y, Wei, D, He, F, Jiang, S, Hu, G, Wu, H, Chen, X.
Deposit date:2004-07-05
Release date:2004-07-27
Last modified:2022-03-02
Method:SOLUTION NMR
Cite:Solution Structure of BmP01 from the Venom of Scorpion Buthus martensii Karsch
Biochem.Biophys.Res.Commun., 276, 2000
3VZ1
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Structural insights into substrate and cofactor selelction by sp2771
Descriptor: Succinate-semialdehyde dehydrogenase
Authors:Yuan, Y.A, Yuan, Z, Yin, B, Wei, D.
Deposit date:2012-10-09
Release date:2013-07-10
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural basis for cofactor and substrate selection by cyanobacterium succinic semialdehyde dehydrogenase
J.Struct.Biol., 182, 2013
3VZ2
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Structural insights into substrate and cofactor selection by sp2771
Descriptor: Succinate-semialdehyde dehydrogenase
Authors:Yuan, Y.A, Yuan, Z, Yin, B, Wei, D.
Deposit date:2012-10-09
Release date:2013-10-16
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structural basis for cofactor and substrate selection by cyanobacterium succinic semialdehyde dehydrogenase
J.Struct.Biol., 182, 2013
3VZ3
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Structural insights into substrate and cofactor selection by sp2771
Descriptor: 4-oxobutanoic acid, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, Succinate-semialdehyde dehydrogenase
Authors:Yuan, Y.A, Yuan, Z, Yin, B, Wei, D.
Deposit date:2012-10-09
Release date:2013-07-10
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.69 Å)
Cite:Structural basis for cofactor and substrate selection by cyanobacterium succinic semialdehyde dehydrogenase
J.Struct.Biol., 182, 2013
3VZ0
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Structural insights into cofactor and substrate selection by Gox0499
Descriptor: NONAETHYLENE GLYCOL, Putative NAD-dependent aldehyde dehydrogenase
Authors:Yuan, Y.A, Yuan, Z, Yin, B, Wei, D.
Deposit date:2012-10-09
Release date:2013-07-10
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural basis for cofactor and substrate selection by cyanobacterium succinic semialdehyde dehydrogenase
J.Struct.Biol., 182, 2013
7YPM
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BU of 7ypm by Molmil
Crystal structure of transaminase CC1012 complexed with PLP and L-alanine
Descriptor: 1,2-ETHANEDIOL, ALANINE, Aspartate aminotransferase family protein, ...
Authors:Yang, L, Wang, H, Wei, D.
Deposit date:2022-08-03
Release date:2023-05-24
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.984 Å)
Cite:Mechanism-Guided Computational Design of omega-Transaminase by Reprograming of High-Energy-Barrier Steps.
Angew.Chem.Int.Ed.Engl., 61, 2022
7YPN
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Crystal structure of transaminase CC1012 mutant M9 complexed with PLP
Descriptor: 1,2-ETHANEDIOL, Aspartate aminotransferase family protein, DI(HYDROXYETHYL)ETHER, ...
Authors:Yang, L, Wang, H, Wei, D.
Deposit date:2022-08-03
Release date:2023-05-24
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.049 Å)
Cite:Mechanism-Guided Computational Design of omega-Transaminase by Reprograming of High-Energy-Barrier Steps.
Angew.Chem.Int.Ed.Engl., 61, 2022

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